| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,642,373 | C→G | 15.4% | intergenic (+306/+116) | cspF → / ← quuQ | Qin prophage; cold shock protein/Qin prophage; putative antitermination protein Q |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,642,373 | 0 | C | G | 15.4% | 319.9 / 47.5 | 117 | intergenic (+306/+116) | cspF/quuQ | Qin prophage; cold shock protein/Qin prophage; putative antitermination protein Q |
| Reads supporting (aligned to +/- strand): ref base C (56/43); new base G (9/9); total (65/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.77e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
ACCAAGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCA > NC_000913/1642277‑1642471 | nccAAGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGc > 2:2088888/2‑100 (MQ=255)aCCAAGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGc > 1:377245/1‑100 (MQ=255) ccAAGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCg < 1:4014827/100‑1 (MQ=255) ccAAGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCg > 1:587028/1‑100 (MQ=255) aGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGt < 2:1425151/100‑1 (MQ=255) aGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGt < 1:1883776/100‑1 (MQ=255) aGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGt < 1:3081043/100‑1 (MQ=255) cACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGtttt < 2:3146613/100‑1 (MQ=255) cACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGtttt > 1:2817122/1‑100 (MQ=255) cACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGtttt > 1:106294/1‑100 (MQ=255) cACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGtttt > 2:2363160/1‑100 (MQ=255) aCCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGttttg < 1:1689113/100‑2 (MQ=255) aCCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGttttg < 1:3126682/100‑2 (MQ=255) aCCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGCATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGtttt < 2:3146944/99‑1 (MQ=255) ccAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGttttgt < 2:2665525/100‑3 (MQ=255) ccAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGttttgt < 1:727012/100‑3 (MQ=255) ccAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCt < 1:77559/100‑1 (MQ=255) ccAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCt < 1:2891625/100‑1 (MQ=255) cAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTGATGAGCGGGttttgtg < 2:3987403/100‑4 (MQ=39) aaaTAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACtttt > 1:2630245/1‑100 (MQ=255) aaaTAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACtttt > 1:972681/1‑100 (MQ=255) aaaTAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACtttt > 2:2275326/1‑100 (MQ=255) aataatAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACttttt < 1:3054067/100‑1 (MQ=255) ntaataaGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTc > 1:1734509/2‑100 (MQ=255) ataataAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTAcagatcg > 2:3881216/1‑94 (MQ=255) ataataAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTc < 1:933062/100‑1 (MQ=255) taataaGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCt < 1:2397166/100‑1 (MQ=255) taataaGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCt < 1:2397022/100‑1 (MQ=255) aataaGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCGCATTTAAAGCAGAAAAACCGCTCCTCAGCGGGTTTTCTACTTTTTCtt > 1:531774/1‑100 (MQ=255) aataaGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCtt < 1:2275331/100‑1 (MQ=255) aaGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAAc < 1:2642434/100‑1 (MQ=255) gTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGt > 2:341799/1‑100 (MQ=255) ttAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTc > 1:1095693/1‑100 (MQ=255) tAACAGACATGAGTCCCGGGATGAGATTCAACAGTAACATGGCCAGATTTAAAGCACAAAACCCGCCCATCAGCGGGTTTTCTAATCTGTCTTAACggc > 2:1243740/1‑97 (MQ=255) aaCAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCACCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCgg > 2:2226371/1‑100 (MQ=255) cATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATAc < 1:3644655/100‑1 (MQ=255) aTGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACa < 1:3326095/100‑1 (MQ=255) gAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACaaa < 1:2634197/100‑1 (MQ=255) tCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGcc < 1:1199034/100‑1 (MQ=255) ccGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCa > 2:1295861/1‑100 (MQ=255) attagagTCGACTTTTCCAGTGCCCCATTTTAAGTGCAAGGCCCGCTCATCAGCGGTTTTTCTACTTTTTCTTATCGTGGGTTATACAAAgg < 2:3552104/89‑2 (MQ=255) aTGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGtt > 1:2146334/1‑100 (MQ=255) tGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTg < 2:1339528/100‑1 (MQ=255) tGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTg < 1:880061/100‑1 (MQ=255) gagaTTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTTTTATCTTCTGGTATACAAAGCCGATCGTTGa > 2:1760835/1‑100 (MQ=255) gagaTTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGa < 1:1202538/100‑1 (MQ=255) agaTTCAACATTACCATTGCCCTATTTAAAGCACAAAACCCGCTCATCAGCGGGATTTCTACTTTTTCTTAACGTCGGGTATACAAAGc < 2:3021984/89‑1 (MQ=255) gaTTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGaaa > 2:212760/1‑100 (MQ=255) cAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAAt > 2:2019752/1‑100 (MQ=255) cAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAAt > 1:1601769/1‑100 (MQ=255) aaCATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAAtt > 1:3789641/1‑100 (MQ=255) aaCATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCAGGTATACAAAGACCCTCGTTGAAAAAAtt > 2:3631156/1‑100 (MQ=255) cATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAACCCCATCGTTGAACAAAttt > 2:145900/1‑99 (MQ=255) aTTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTa < 2:4134497/100‑1 (MQ=255) tACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATc < 1:3832896/100‑1 (MQ=255) aCCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATcc > 1:453039/1‑100 (MQ=255) aCCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATc > 1:1659407/1‑99 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATAttt > 1:1927822/1‑100 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATAttt > 1:708102/1‑100 (MQ=255) gCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATAttt > 1:2751889/1‑100 (MQ=255) ccATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTATTTTTTCTTAACGTCTGTTATACAAAGCCCATCGTTGAAAAAATTTTATCCATAtttttt < 2:4120579/100‑1 (MQ=255) ccATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATAtttttt < 2:2900722/100‑1 (MQ=255) ccATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATAttttt < 1:3931337/99‑1 (MQ=255) ttAAAGCACAAAACCCGCTGATCAGCGGGTTTTCTACGTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCAGATTTTTTGaaa < 2:1664310/100‑1 (MQ=255) ttAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGaaa < 1:800665/100‑1 (MQ=255) tAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGaaaa < 1:3115476/100‑1 (MQ=255) aaGCACAAAACCCTCTTATCAGCGTGTTTTCTACTTTTTCGTAACTTCGTGTGTACAAAACCCATACTTGAAAAAATTTTATCCATATTTTTTGAAAAAt < 2:1791899/100‑1 (MQ=255) agtagaaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATg > 2:3861559/6‑100 (MQ=38) aGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATg < 2:493216/100‑1 (MQ=255) aGCACAAAACACGATCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATg < 2:791694/100‑1 (MQ=255) gtagaaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGc > 2:3025470/5‑100 (MQ=39) gCACAAAACTCGCTCATCAGAGGGTTGTTTACTTTTTCTTAACGTCAGGTACGCAAAGACCGTCATTCGAAAAATTTTCTGTATATTTTTTGaaaactac > 2:1763826/1‑96 (MQ=255) gCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGc > 2:3979671/1‑100 (MQ=255) gCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGc > 1:3255341/1‑100 (MQ=255) gCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGc > 2:2540536/1‑100 (MQ=255) gCACAAAACCCGCTCATCAGCGGGTTTTCGACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGc < 2:107311/100‑1 (MQ=255) tagaaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCa > 2:542348/4‑100 (MQ=39) cacaAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCa > 1:3684594/1‑100 (MQ=255) cacaAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCa > 1:1870005/1‑100 (MQ=255) cacaAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCCTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCa > 2:2231441/1‑100 (MQ=255) agaaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCaa > 2:2490670/3‑100 (MQ=255) agaaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCa > 2:206819/3‑99 (MQ=255) agaaaaCCCGCTGATGAGCGGGTTGTCTACTTTTTCTTAACGTCGGGTATACAGAGCCCATCGTTGAAAAAAATTTATACATATTTTTTGAAAAATGCa > 2:791429/3‑99 (MQ=255) acaAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCaa > 1:3657004/1‑100 (MQ=255) acaAAACCCGCGCATCATCGGGTTTTCTACTTTGTCTAAACGTCGTGTATACAATTTCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCaa < 2:1000286/100‑1 (MQ=255) aaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAAc > 2:3476232/1‑100 (MQ=255) aaaaCCCGCTGATGAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAAc > 2:2282739/1‑100 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGTTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCaaa < 2:2725452/99‑1 (MQ=255) aaaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCaaa > 1:6747/1‑99 (MQ=255) aaaCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAGAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAAca > 2:221399/1‑100 (MQ=255) aCCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAAcatc < 1:3975137/100‑1 (MQ=255) cGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATg > 2:767728/1‑100 (MQ=255) gCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGt < 1:2000323/100‑1 (MQ=255) tcatcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCg < 2:1229787/100‑1 (MQ=255) catcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGt > 1:2501102/1‑97 (MQ=255) catcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGc < 1:501544/100‑1 (MQ=255) atcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGcc < 2:2155039/100‑1 (MQ=255) atcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGcc < 2:6747/100‑1 (MQ=255) tcaGCGGGTTTTGTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCa > 1:2758614/1‑100 (MQ=255) tcaGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCa < 1:3997848/100‑1 (MQ=255) | ACCAAGTCACCAGCTAAATAATAAGTTAACAGACATGAGTCCCGGGATGAGATTCAACATTACCATTGCCCCATTTAAAGCACAAAACCCGCTCATCAGCGGGTTTTCTACTTTTTCTTAACGTCGGGTATACAAAGCCCATCGTTGAAAAAATTTTATCCATATTTTTTGAAAAATGCAAACATCATGTCGCCA > NC_000913/1642277‑1642471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |