New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3984320NA (NA)5 (0.080)
+AGCCTACAGAACGCTGCAATTTATTGAATTTGCACGATCA
4/118 10.8 6.1% noncoding (101/104 nt) RIP287 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP287 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4373261 = 131 (1.310)noncoding (65/99 nt) RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 133 total aligned reads displayed.

ATGTGATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGAT  >  NC_000913/4373162‑4373360
                                                                                                   |                                                                                                   
ntgtgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAAttt                                                                                                     >  2:2143403/2‑100 (MQ=255)
aTGTGATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAAttt                                                                                                     >  1:2127366/1‑100 (MQ=255)
 tgtgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTg                                                                                                    <  1:1404443/100‑1 (MQ=255)
 tgcgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCTCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAAttt                                                                                                     <  2:1656953/96‑1 (MQ=255)
 tctgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTg                                                                                                    <  2:696925/98‑1 (MQ=255)
  gtgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGt                                                                                                   >  1:2213444/1‑100 (MQ=255)
  gtgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGt                                                                                                   <  1:2238417/100‑1 (MQ=255)
   tgATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTa                                                                                                  >  2:34489/1‑100 (MQ=255)
    gATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTgaga                                                                                                 >  1:696924/1‑97 (MQ=255)
    gATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAg                                                                                                 >  2:2003597/1‑100 (MQ=255)
    gATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAg                                                                                                 <  1:1002105/100‑1 (MQ=255)
     aTCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAgg                                                                                                >  2:2499437/1‑100 (MQ=255)
      tCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGc                                                                                               >  1:25730/1‑100 (MQ=255)
       ccAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGcc                                                                                              <  1:2365041/100‑1 (MQ=255)
        cAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCg                                                                                             >  2:1658680/1‑100 (MQ=255)
        cAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCg                                                                                             <  1:629441/100‑1 (MQ=255)
        cAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCg                                                                                             <  2:1503946/100‑1 (MQ=255)
            ggCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATa                                                                                         <  1:1060204/100‑1 (MQ=255)
                 ggTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAggag                                                                                    >  2:2016631/1‑98 (MQ=255)
                 ggTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCg                                                                                    >  1:720999/1‑100 (MQ=255)
                  gTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGt                                                                                   <  1:2003587/100‑1 (MQ=255)
                  gTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGt                                                                                   <  2:1970585/100‑1 (MQ=255)
                     aCAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTa                                                                                >  1:1348895/1‑100 (MQ=255)
                     aCAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTa                                                                                <  1:2290767/100‑1 (MQ=255)
                      cAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGCTAAGGCGTTTAc                                                                               >  1:107802/1‑100 (MQ=255)
                      cAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                               >  2:1717575/1‑100 (MQ=255)
                      cAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                               >  2:363155/1‑100 (MQ=255)
                      cAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                               >  1:2372067/1‑100 (MQ=255)
                       aaaCGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcg                                                                              <  1:127611/100‑1 (MQ=255)
                        aaCGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                             >  1:990107/1‑100 (MQ=255)
                         aCGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgcc                                                                            <  2:1106908/100‑1 (MQ=255)
                         aCGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgcc                                                                            <  2:1898148/100‑1 (MQ=255)
                          cGTATAATGGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgccg                                                                           <  2:523846/100‑1 (MQ=255)
                           gTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgccgc                                                                          >  2:2063095/1‑100 (MQ=255)
                            tataATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCa                                                                         <  2:770675/100‑1 (MQ=255)
                               aaTTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                      <  1:1342951/100‑1 (MQ=255)
                                   gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                  >  2:1899956/1‑100 (MQ=255)
                                   gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                  >  2:74598/1‑100 (MQ=255)
                                   gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                  >  1:396890/1‑100 (MQ=255)
                                   gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCAGTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                  <  1:2231026/100‑1 (MQ=255)
                                       gATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAc                                                              <  1:1979247/100‑1 (MQ=255)
                                       gATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAc                                                              >  2:1076766/1‑100 (MQ=255)
                                       gATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAc                                                              >  1:709253/1‑100 (MQ=255)
                                           cgcttcgcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAAc                                                          <  2:2047/100‑1 (MQ=255)
                                              ttcgcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGAt                                                       >  2:1674913/1‑100 (MQ=255)
                                               tcgcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATc                                                      <  2:592981/100‑1 (MQ=255)
                                               tcgcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATc                                                      >  1:1338535/1‑100 (MQ=255)
                                                cgcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCa                                                     >  1:592980/1‑100 (MQ=255)
                                                  cttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACg                                                   <  2:2201329/100‑1 (MQ=255)
                                                  cttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACg                                                   <  1:2499419/100‑1 (MQ=255)
                                                  cttATCAGGCCTACATAAGGCATTGCAACTGATAGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTGCGCCGCATCCGGCATGACCAACGATCACg                                                   >  1:1563758/1‑100 (MQ=255)
                                                  cgcaTCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACg                                                   <  2:2358768/97‑1 (MQ=255)
                                                   ttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGt                                                  >  2:1156316/1‑100 (MQ=255)
                                                    tATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGtt                                                 >  2:1694198/1‑100 (MQ=255)
                                                    tATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGtt                                                 >  1:1879016/1‑100 (MQ=255)
                                                    tATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGtt                                                 >  2:1644713/1‑100 (MQ=255)
                                                     aTCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTa                                                >  1:1840530/1‑100 (MQ=255)
                                                      tCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTAt                                               <  1:1717565/100‑1 (MQ=255)
                                                       tcttccgatctAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATc                                              <  1:610572/90‑1 (MQ=255)
                                                       cAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATc                                              <  2:1563765/100‑1 (MQ=255)
                                                       cAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATc                                              <  1:2063083/100‑1 (MQ=255)
                                                        aGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCa                                             <  2:990110/100‑1 (MQ=255)
                                                         ggCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAg                                            >  1:1121531/1‑100 (MQ=255)
                                                         ggCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAg                                            >  2:125127/1‑100 (MQ=255)
                                                          gCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGt                                           <  1:2324694/100‑1 (MQ=255)
                                                             tACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCAt                                        >  1:348298/1‑100 (MQ=255)
                                                                aTAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTc                                     <  1:1899946/100‑1 (MQ=255)
                                                                 tccgatcttGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCa                                    <  1:947402/93‑1 (MQ=255)
                                                                 tAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCa                                    <  2:1915960/100‑1 (MQ=255)
                                                                  aaGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAgatcggaaga                                   >  2:610573/1‑91 (MQ=255)
                                                                   aGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAgg                                  <  2:2457043/100‑1 (MQ=255)
                                                                   aGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAgg                                  >  2:2352506/1‑100 (MQ=255)
                                                                   aGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAgg                                  <  2:206689/100‑1 (MQ=255)
                                                                         tGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCaagatcgga                            >  2:947405/1‑92 (MQ=255)
                                                                         tGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGAt                            <  2:286132/100‑1 (MQ=255)
                                                                          gCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATg                           <  2:645016/100‑1 (MQ=255)
                                                                            aaCTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc                         <  2:834399/100‑1 (MQ=255)
                                                                               tGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTcc                      <  2:2127378/100‑1 (MQ=255)
                                                                                gATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCATTTACGCCGCATACGGCATGACCAACGATCACGTTATCTGTCATTTCAGGCTGGATGGCTCCa                     >  1:319596/1‑100 (MQ=255)
                                                                                  ttGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGc                   >  1:1275532/1‑100 (MQ=255)
                                                                                  ttGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGc                   <  1:1999785/100‑1 (MQ=255)
                                                                                      aTGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg               <  1:1644704/100‑1 (MQ=255)
                                                                                       tGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGc              <  1:1778388/100‑1 (MQ=255)
                                                                                         cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt            >  1:197236/1‑100 (MQ=255)
                                                                                         cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt            >  2:2284804/1‑100 (MQ=255)
                                                                                         cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt            >  2:1233041/1‑100 (MQ=255)
                                                                                         cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt            >  1:385347/1‑100 (MQ=255)
                                                                                         cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt            >  2:670180/1‑100 (MQ=255)
                                                                                         cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt            >  1:1511479/1‑100 (MQ=255)
                                                                                           tGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTa          >  1:2351889/1‑100 (MQ=255)
                                                                                           ggtgaATTTGTAGGCCGGAGAAGGCGTTTACGCCGCGTCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt           <  2:385348/96‑1 (MQ=255)
                                                                                            gagaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTan         <  1:2143391/100‑2 (MQ=255)
                                                                                            gagaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAg         >  2:1311685/1‑100 (MQ=255)
                                                                                            gagaATTTGTAGGCCGAATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAg         <  2:44010/100‑1 (MQ=255)
                                                                                             agaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc        <  2:348299/100‑1 (MQ=255)
                                                                                             agaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc        >  1:2421287/1‑100 (MQ=255)
                                                                                              gaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCa       <  1:92659/100‑1 (MQ=255)
                                                                                               aaTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCaa      >  2:919314/1‑100 (MQ=255)
                                                                                                   tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGAt  >  2:702714/1‑100 (MQ=255)
                                                                                                   tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGAt  <  2:1593355/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATGTGATCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGAT  >  NC_000913/4373162‑4373360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.