New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 774622	115 (1.020)	6 (0.060)	6/186	13.1	5.1%	intergenic (+20/‑130)	ybgE/ybgC	putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase
	?	NC_000913	= 774648	115 (1.090)					intergenic (+46/‑104)	ybgE/ybgC	putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/774518‑774622 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaTTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG  <  NC_000913/774648‑774550                                                                                                                                                                                                              GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT                                                                                                          <  2:1822146/100‑1   AGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAA                                                                                                        <  2:1721981/100‑1      AGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA                                                                                                     <  1:2650004/100‑1           CTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTAT                                                                                                >  1:156569/1‑100                                   TTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTT                                                                        <  2:156566/100‑1                                     GCTTGCCGATATTGTTTTCATTGTCGGGCTGATGTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCCCATAATTTTT                                                                       <  1:186208/99‑1                                           CGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAG                                                                <  1:1350319/100‑1                                                 TGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCT                                                          >  2:2337907/1‑100                                                      TCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTT                                                     <  1:2337918/100‑1                                                                                                    TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG       >  1:1249075/1‑100                                                                                                    TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG       >  1:377428/1‑100                                                                                                     AAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGC      <  2:214235/100‑1                                                                                                     AAAAATTTATGGGCCTGGAGCGGCCCATAATTTTGTAAAGAGAATTCTGATATAAAAGAGGAAGAAAATTAGCCCGACAATGATAACAAGATCGGCAAac      >  2:2354909/1‑98                                                                                                      AAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCA     >  2:417618/1‑100                                                                                                      AAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCA     >  2:1355195/1‑100                                                                                                        AATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAAT   >  2:2797563/1‑100                                                                                                         ATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG  <  1:905910/100‑1                                                                                                         ATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG  <  1:2773652/100‑1                                                                                                                                                                                                              GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/774518‑774622 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaTTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG  <  NC_000913/774648‑774550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.