BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,781,140	0	A	G	21.4%	215.6 / 17.4	104	intergenic (+123/‑75)	lldD/trmL	L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand): ref base A (65/16); new base G (0/22); total (65/39)
Fisher's exact test for biased strand distribution p-value = 1.46e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 111 total aligned reads displayed.

CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACG  >  NC_000913/3781042‑3781236

gatctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACCCCGCGCTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGagag                                                                                                    <  1:157061/98‑1 (MQ=255)

ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGagag                                                                                                    >  1:1640814/1‑100 (MQ=255)

   ctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGc                                                                                                 <  1:2153947/100‑1 (MQ=255)

    tcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGcc                                                                                                >  1:2087430/1‑100 (MQ=255)

     cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGagagagatc                                                                                               >  2:157058/1‑95 (MQ=255)

     cccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑g                                                                                              >  1:1420074/1‑100 (MQ=255)

      ccTCAGGGAGAGGGGACCGTTCGGCTCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑gg                                                                                             <  1:2625585/100‑1 (MQ=255)

      ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGc                                                                                                 >  2:118317/1‑97 (MQ=255)

      ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑gg                                                                                             <  1:2615407/100‑1 (MQ=255)

      ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑gg                                                                                             >  1:1609824/1‑100 (MQ=255)

      ccTCAGGGAGAGGGGACCGTTCGGCGATGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑gg                                                                                             >  1:1713928/1‑100 (MQ=255)

       cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑ggg                                                                                            >  1:60521/1‑100 (MQ=255)

         cAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGt                                                                                          >  2:1455308/1‑100 (MQ=255)

          aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTg                                                                                         >  1:434469/1‑100 (MQ=255)

           gggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGa                                                                                        >  2:2656521/1‑100 (MQ=255)

              agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑ggg                                                                                    <  1:2656533/100‑1 (MQ=255)

              agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑ggg                                                                                    <  1:2053804/100‑1 (MQ=255)

               gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑gggg                                                                                   <  2:1138473/100‑1 (MQ=255)

               gagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGAGA‑gggg                                                                                   >  1:2793143/1‑100 (MQ=255)

                 ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTTTTTTTTT‑CTCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑g                                                                                      >  2:559493/1‑95 (MQ=255)

                   ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑aaaa                                                                              >  1:1872188/1‑100 (MQ=255)

                     aCCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAgg                                                                            <  1:3953/100‑1 (MQ=255)

                      ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGc                                                                           >  1:410433/1‑100 (MQ=255)

                        gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCg                                                                         >  1:1277331/1‑100 (MQ=255)

                            ggCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACt                                                                     >  1:472856/1‑100 (MQ=255)

                            ggCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGCGA‑GGGG‑AAAAGGCCGCACt                                                                     >  1:1644918/1‑100 (MQ=255)

                                 tttatgtcCCCCCTCCCCCTAAAACGACCCCGCCCTTTTTTTTCCCCCCCCG‑CCCCCCG‑GGGGGGGGGGCG‑GGGGGGG‑GGGG‑AAAAGGCCGCACTGCt                                                                  <  1:844344/96‑1 (MQ=255)

                                 tgtatgtcCTCCCCCCCTCGGAAACGACACCGCATTTTTTTTTTCTCCCCCG‑CCCCTCG‑GGGGAGGGGGCG‑GGGGGGA‑GGGG‑AAAAGGCCGCACTGc                                                                   <  2:1276918/97‑1 (MQ=255)

                                    atgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCa                                                             >  2:2170817/1‑100 (MQ=255)

                                     tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCaa                                                            >  2:1386601/1‑100 (MQ=255)

                                       taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGC‑GGGG‑AAAAGGCCGCACTGCTCACCAAtt                                                          >  2:1060303/1‑100 (MQ=255)

                                       taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAAtt                                                          >  1:1026559/1‑100 (MQ=255)

                                       taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAAtt                                                          >  1:2573514/1‑100 (MQ=255)

                                       taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAAtt                                                          >  1:1633261/1‑100 (MQ=255)

                                         cccccTCACTCGGAACCGACCCCGCCTTTTTTTTTTCCCCCCCG‑CCCCCCG‑GGGGGGGGGGCG‑GGGGGGG‑GGGG‑AAAAGGCCGCACTGCTCACCAAttt                                                         <  1:2245156/97‑1 (MQ=255)

                                           ccccccccctGAAACGACACCGCCCTCTTTTTTTCCCCCCCC‑CCCCCCG‑GGGGGGGGGGCC‑GGGGGGA‑GGGG‑AAAAGGCCGCACTGCTCACCAAttt                                                         <  2:1420068/89‑1 (MQ=255)

                                           cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGGGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                      <  2:586556/100‑1 (MQ=255)

                                           cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAAtttaga                                                      >  2:2245145/1‑97 (MQ=255)

                                           cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCt                                                      >  2:686953/1‑100 (MQ=255)

                                            ccTCACTCTGAAACGACACCGCACTCTTTTTTTTTTTTTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTg                                                     >  2:1768637/1‑100 (MQ=39)

                                             cTCCCTCTGAAACGACCCCGCCCTCTTTTTTTCCCCCGCG‑CCCCCCG‑GGGGGGGGGGCG‑GGGGGGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGc                                                    <  2:1107608/100‑1 (MQ=255)

                                               ccctctGAACCGACCCCGACCTCTTTTTTTCTCCCTCG‑CCCC‑CC‑GGGGGGGGGGCCGGGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGc                                                    <  2:1277326/96‑1 (MQ=255)

                                               cccgcagacacgacgCGGCACTCTTTTTTTCCCCCCCG‑CCCCCCG‑GGGGAGGGGGCG‑GGGGGGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGc                                                    <  2:2021154/89‑1 (MQ=255)

                                               cccccgcaaaCGACACCGCACTCTTTTTTGCCCCCCCC‑CCCCCCG‑GGGGGGGGGGCC‑GGGG‑GA‑GGGGAAAAAGGCCGCACTGCTCACCAATTTTCTg                                                     <  2:1221690/90‑1 (MQ=255)

                                                cctctGAACCGCCGCCGACCTTTTTTTTTCTCCCCCG‑CCCCCCG‑GGGGGGGGGGCG‑GGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGc                                                    <  2:410429/96‑1 (MQ=255)

                                                aCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTAt                                                 >  1:1663654/1‑100 (MQ=255)

                                                 ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                >  2:721565/1‑100 (MQ=255)

                                                 ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                >  2:672352/1‑100 (MQ=255)

                                                   ctGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATTCt                                              >  2:2805966/1‑100 (MQ=255)

                                                   ctGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                              >  1:616035/1‑100 (MQ=255)

                                                   ctGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                              >  1:2027178/1‑100 (MQ=255)

                                                   ctGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt                                              >  2:2533324/1‑100 (MQ=255)

                                                    tcaaaCGACCCCGCACTCTTTTTGTGGCCCTCC‑CCCCTCC‑GGTGTGAGGCTG‑GGGTTGA‑GGGG‑GAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                             <  2:580173/98‑1 (MQ=255)

                                                    tGAAACGACACCGCACTCTTTTTTTTTTTTTTT‑TTCCCCC‑GGGGAGAGGGCC‑GCGGTGA‑TGAG‑AAAAGGCCGCAATGCTCACCAATTTTCTGCTATcc                                               >  2:70124/1‑98 (MQ=255)

                                                    tGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                             >  2:957118/1‑100 (MQ=255)

                                                     gAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc                                            >  2:319492/1‑100 (MQ=255)

                                                      aaaCGACCCCGCACTCTTTTTTCCTCCCCCG‑CCCCTCC‑GGGGAGGGGGCC‑GGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                               <  2:1750015/96‑1 (MQ=255)

                                                      aaaCGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc                                           >  1:2703994/1‑100 (MQ=255)

                                                       accGACCCCACACTTTTTTTTTCCCCCGCC‑CCCCTCC‑GGGGAGAGGGCG‑GGGGTGA‑GGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                               <  2:750495/93‑1 (MQ=255)

                                                       aaCGACCCCGCACTTTTTTTTCCTCCCCCC‑CCCCTCG‑GGGGAGAGGGCC‑GGGGGGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                             <  2:763045/97‑1 (MQ=255)

                                                       aaCGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc                                          >  1:2080073/1‑100 (MQ=255)

                                                       aaCGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc                                          >  2:2609733/1‑100 (MQ=255)

                                                         cgccacCGCCCTCTTTTTTCGTCCCTCT‑CCCCCCC‑GGGGAGAGGCCG‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                             <  2:579933/92‑1 (MQ=255)

                                                         cGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGAGGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccc                                          <  2:2635848/99‑1 (MQ=255)

                                                           accccccACTTTTTTTTTCCCCCCCC‑CCCCTCG‑GGGGAGAGGGCG‑GGGTTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc                                        <  1:219917/92‑1 (MQ=255)

                                                            cacCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                     >  2:1423306/1‑100 (MQ=255)

                                                            cacCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                     >  1:1224808/1‑100 (MQ=255)

                                                             cccGCCCTTTTTTTTGCCCCGCCGCCCCCCCC‑GGGGAGAGTCCC‑GGGTGGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                         <  2:1279923/95‑1 (MQ=255)

                                                              ccccACTCTTTTTTCCCCCGCCC‑CCCCGCG‑GGGGGGGGGGCG‑GGGGTGG‑GGGA‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                   <  2:456659/97‑1 (MQ=255)

                                                              ccGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt                                   >  1:1073080/1‑100 (MQ=255)

                                                                  cccttttttttCCCCCCCC‑CCCCCCCGGGGGGGGGGGCG‑GGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc                                      <  2:2027168/90‑1 (MQ=255)

                                                                  aCTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACCAAgg                               >  2:2726328/1‑100 (MQ=255)

                                                                    tttttttgtCTCCCGTG‑CCCCCCT‑GGGGAGGGGCCC‑GGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg                                       <  2:1813474/88‑1 (MQ=255)

                                                                     ttttttttCCCCCCCC‑CCCCCCCGGGGGAGGGGGCC‑GGGTTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                             <  1:622060/99‑1 (MQ=255)

                                                                     ctTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg                            >  2:830674/1‑100 (MQ=255)

                                                                     ctTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg                            >  1:2781667/1‑100 (MQ=255)

                                                                           ttCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                      >  1:1420189/1‑100 (MQ=255)

                                                                           ttCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                      >  1:1419972/1‑100 (MQ=255)

                                                                              tccgatctccccTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                    <  1:819167/92‑1 (MQ=255)

                                                                               cccTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                  >  1:2504590/1‑100 (MQ=255)

                                                                               cccTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                  >  2:1349388/1‑100 (MQ=255)

                                                                               cccTCC‑CCCCCGG‑GGGGGGGGGGCC‑GGGGTGG‑GGGA‑AAGAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg                     <  1:2533336/97‑1 (MQ=255)

                                                                                ccTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                 >  1:2387502/1‑100 (MQ=255)

                                                                                ccTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                 >  1:590429/1‑100 (MQ=255)

                                                                                 cccccccccccC‑GGGGAGGGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                    <  2:597297/92‑1 (MQ=255)

                                                                                   cG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa              >  1:885848/1‑100 (MQ=255)

                                                                                    ccccccGCC‑GGGGGGGGGGCC‑GGGGGGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAAc               <  1:1060307/97‑1 (MQ=255)

                                                                                      ccccTCG‑GGGGGGGGGGCG‑GGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt             <  2:2014674/99‑1 (MQ=255)

                                                                                      ccccTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGcagatcgga            >  2:819164/1‑92 (MQ=255)

                                                                                      ccccTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc            >  1:1216055/1‑100 (MQ=255)

                                                                                      ccccTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc            >  1:681659/1‑100 (MQ=255)

                                                                                      ccccTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc            >  2:1250759/1‑100 (MQ=255)

                                                                                       cccTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg           >  1:2296001/1‑100 (MQ=255)

                                                                                         cTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa         >  1:2348576/1‑100 (MQ=255)

                                                                                          tCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc        >  2:1349124/1‑100 (MQ=255)

                                                                                           cggggggggggggCG‑GGGGGGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc        <  1:1455314/97‑1 (MQ=255)

                                                                                               gggcgagGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa    <  2:311291/96‑1 (MQ=255)

                                                                                                ggAGGGGGCC‑GGGGTGG‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc   <  2:1872179/100‑1 (MQ=255)

                                                                                                ggAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc   >  2:1382050/1‑100 (MQ=255)

                                                                                                 gagaGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg  >  2:2543491/1‑100 (MQ=255)

CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCG‑CCCCTCC‑GGGGAGAGGGCC‑GGGGTGA‑GGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACG  >  NC_000913/3781042‑3781236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`