New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4606703	121 (1.000)	8 (0.070)	8/168	NT	6.2%	coding (998/1032 nt)	rsmC	16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
	?	NC_000913	= 4606716	130 (1.140)					coding (985/1032 nt)	rsmC	16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

ACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4606603‑4606703 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT  <  NC_000913/4606716‑4606618                                                                                                                                                                                                          ACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCG                                                                                                      >  2:2334964/1‑100  CGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC                                                                                                     >  1:2533605/1‑100  CGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC                                                                                                     >  2:1003538/1‑100                    CGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCC                                                                                   <  2:2381711/100‑1                      GATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT                                                                                 <  2:1746283/100‑1                       ATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATT                                                                                <  1:728524/100‑1                         AAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTAT                                                                              <  1:581188/100‑1                          AGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATG                                                                             <  1:1879925/100‑1                            GCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGAC                                                                           <  1:755018/100‑1                            GCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGA                                                                            <  1:962855/99‑1                             CGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGACC                                                                          <  1:1374046/100‑1                                                                                                 GGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCG      <  1:2047472/100‑1                                                                                                 GGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCG      <  1:2047687/100‑1                                                                                                   CGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGAC    <  2:962458/100‑1                                                                                                   CGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGAC    <  2:2512860/100‑1                                                                                                     CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT  >  2:2830034/1‑100                                                                                                     CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT  >  1:800878/1‑100                                                                                                                                                                                                          ACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4606603‑4606703 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT  <  NC_000913/4606716‑4606618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.