New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 349938NA (NA)15 (0.130) 6/164 NT NA noncoding (334/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 = 349969 NA (NA)noncoding (365/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 192 total aligned reads displayed.

ACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAA  >  NC_000913/349839‑350037
                                                                                                   |                                                                                                   
 cTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGg                                                                                                    >  1:1937574‑M1/1‑99 (MQ=255)
  tGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgt                                                                                                   >  1:2824774‑M1/1‑98 (MQ=255)
    tAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcg                                                                                                 <  2:2176547‑M1/100‑5 (MQ=255)
    tAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcg                                                                                                 <  1:468797‑M1/100‑5 (MQ=255)
    tAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcg                                                                                                 <  1:388480‑M1/100‑5 (MQ=255)
     aGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGCCCTGTAGgtcgg                                                                                                >  1:1088458‑M1/1‑95 (MQ=255)
     aGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                <  1:2940401‑M1/100‑6 (MQ=255)
     aGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                >  1:2030014‑M1/1‑95 (MQ=255)
     aGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                <  1:82413‑M1/100‑6 (MQ=255)
      ggTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgga                                                                                               <  1:593316‑M1/100‑7 (MQ=255)
      ggTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgga                                                                                               >  1:187972‑M1/1‑94 (MQ=255)
       gTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggat                                                                                              >  2:697595‑M1/1‑93 (MQ=255)
        tCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATa                                                                                             <  1:2649439/100‑1 (MQ=33)
          ggATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAg                                                                                           <  2:1311717/100‑1 (MQ=33)
          ggATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAg                                                                                           >  1:3191172/1‑100 (MQ=33)
             tAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACg                                                                                        <  1:2350540/100‑1 (MQ=33)
             tAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACg                                                                                        >  2:2573422/1‑100 (MQ=33)
              aaGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGc                                                                                       <  1:2095363/100‑1 (MQ=32)
               aGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCa                                                                                      <  2:1243505/100‑1 (MQ=33)
                 aCGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATa                                                                                    <  1:344375/100‑1 (MQ=32)
                  cGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAg                                                                                   <  1:2542262/100‑1 (MQ=33)
                   gCATAGCGTCGCATCCGACAACGGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAg                                                                                   <  1:2758892/99‑1 (MQ=18)
                    cATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGc                                                                                  >  2:2715708/1‑99 (MQ=32)
                    cATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCg                                                                                 >  2:3194026/1‑100 (MQ=32)
                    cATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCg                                                                                 <  1:1655420/100‑1 (MQ=33)
                     aTAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGt                                                                                <  1:2112025/100‑1 (MQ=33)
                      tAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTc                                                                               <  1:2238818/100‑1 (MQ=33)
                        gCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGc                                                                             <  1:3004702/100‑1 (MQ=33)
                         cGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCA                                                                            <  2:2164558‑M2/100‑1 (MQ=255)
                         cGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCA                                                                            <  1:3037738‑M2/100‑1 (MQ=255)
                            cGCCTCCGACAACCGATGCCTGATGCGACGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGgtcggatgcgacgctatgagtcttatcc                                                                         <  2:2939892‑M1/100‑29 (MQ=255)
                             gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCag                                                                        <  2:1159808‑M2/100‑3 (MQ=255)
                             gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCG                                                                        >  1:1243365‑M2/1‑100 (MQ=255)
                              cATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA                                                                       <  1:2162345‑M2/100‑1 (MQ=255)
                               aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggatgcgacgctatgcgtcttatccgac                                                                      <  1:53879‑M1/100‑32 (MQ=255)
                               aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggatgcgacgctatgcgtcttatccgac                                                                      <  1:759953‑M1/100‑32 (MQ=255)
                               aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAC                                                                      >  2:769743‑M2/1‑100 (MQ=255)
                                tCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTCTCAGGCCTACGGGGTGACCTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCA                                                                            >  2:652046‑M2/1‑93 (MQ=255)
                                tCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggatgcgacgctatgcgtcttatccgacc                                                                     <  1:1060903‑M1/100‑33 (MQ=255)
                                tCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGaca                                                                     <  1:2780314/100‑1 (MQ=33)
                                  cGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaac                                                                   >  1:2962683/1‑100 (MQ=33)
                                   gACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaaca                                                                  >  1:1671676/1‑100 (MQ=35)
                                    aCAGCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaac                                                                   <  1:615063/98‑1 (MQ=17)
                                     ccgccgatGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggatgcgacgctatgcgtcttatccgacctacag                                                                <  2:24313‑M1/97‑38 (MQ=255)
                                        ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtctc                                                             <  1:1843198/100‑1 (MQ=40)
                                        ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtctc                                                             >  1:175484/1‑100 (MQ=40)
                                        ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtctc                                                             >  1:1146705/1‑100 (MQ=40)
                                         cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                            <  2:3077106/100‑1 (MQ=40)
                                         cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGCTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                            <  2:2092307/100‑1 (MQ=255)
                                           aTGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAc                                                          <  1:1677273/100‑1 (MQ=255)
                                             gCCTGATGCGCCGCTGACGCGACTTATCAGGCCTAGGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAccc                                                        <  2:1844547/100‑1 (MQ=255)
                                             gCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAccc                                                        <  1:3091656/100‑1 (MQ=255)
                                             gCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAccc                                                        <  1:49099/100‑1 (MQ=255)
                                             gCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAccc                                                        <  1:1413356/100‑1 (MQ=255)
                                             gCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATACGACAACAATCTCGAccc                                                        >  2:973554/1‑100 (MQ=255)
                                              ccTGATGCGCCGCTGACGCGGCTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCt                                                       <  2:550245/100‑1 (MQ=255)
                                                tGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTAc                                                     <  1:452692/100‑1 (MQ=255)
                                                   tGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACaaa                                                  >  2:1944759/1‑100 (MQ=255)
                                                    gcgcCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAAt                                                 <  2:570429/100‑1 (MQ=255)
                                                    gcgcCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACaaa                                                  >  2:2028141/1‑99 (MQ=255)
                                                    gcgcCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAAt                                                 >  1:3159176/1‑100 (MQ=255)
                                                     cgccgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATg                                                <  1:2399762/100‑1 (MQ=255)
                                                       ccgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGAt                                              <  1:287524/100‑1 (MQ=255)
                                                              cgtgACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATTTCGACCCTACAAATGATAACaa                                         >  2:3217432/4‑98 (MQ=255)
                                                                cgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGAc                                     <  2:150815/100‑1 (MQ=255)
                                                                 gACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACg                                    >  2:1608317/1‑100 (MQ=255)
                                                                 gACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACg                                    <  2:2870625/100‑1 (MQ=255)
                                                                  aCTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGa                                   >  1:1736870/1‑100 (MQ=255)
                                                                   cTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCCTAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGa                                   >  2:954984/1‑99 (MQ=255)
                                                                   cTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAg                                  <  2:614161/100‑1 (MQ=255)
                                                                   cTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAg                                  >  2:2929389/1‑100 (MQ=255)
                                                                   cTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAg                                  <  2:22267/100‑1 (MQ=255)
                                                                    ttATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCGTAGCGTCGCATACGACcaacagttcaggtcaccgcgtaggcctggtatgtcgc                                 <  1:31026‑M2/100‑38 (MQ=255)
                                                                     tATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGa                                >  2:899372/1‑100 (MQ=255)
                                                                     tATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGa                                >  2:2592000/1‑100 (MQ=255)
                                                                      aTCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGac                               >  1:2991121/1‑100 (MQ=255)
                                                                         aGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                            >  1:3241938/1‑100 (MQ=255)
                                                                          ggCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaaca                           <  1:1486102/100‑1 (MQ=255)
                                                                          ggCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaaca                           <  1:2493659/100‑1 (MQ=255)
                                                                            ccTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATg                         <  2:1548139/100‑1 (MQ=255)
                                                                                cGGGGTGAACTGAACAGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCg                     <  1:667387/100‑1 (MQ=255)
                                                                                 ggggTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGa                    <  1:505703/100‑1 (MQ=255)
                                                                                  gggTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGac                   <  2:2488254/100‑1 (MQ=255)
                                                                                    gTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGacac                 <  1:2828010/100‑1 (MQ=255)
                                                                                      gaactgaactGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACaa               <  1:2468290/100‑1 (MQ=255)
                                                                                       aactgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAAc              >  1:1000012/1‑100 (MQ=255)
                                                                                         ctgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGa            >  1:1223761/1‑100 (MQ=255)
                                                                                           gaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATc          >  2:1666307/1‑100 (MQ=255)
                                                                                           gaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATc          >  2:1328768/1‑100 (MQ=255)
                                                                                            aactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATcc         <  1:205089/100‑1 (MQ=255)
                                                                                            aactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATcc         <  1:179990/100‑1 (MQ=255)
                                                                                             actgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCt        >  2:3132330/1‑100 (MQ=255)
                                                                                              ctgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTg       >  2:596986/1‑100 (MQ=255)
                                                                                               tgTAGGTCGGATAAGACGGATGGCGTCGCATCCGACctacagttcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgt      <  2:2087807‑M2/100‑65 (MQ=255)
                                                                                               tgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGc      <  2:1876900/100‑1 (MQ=255)
                                                                                               tgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGc      <  2:1233153/100‑1 (MQ=255)
                                                                                                 tAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCaa    <  2:2048504/100‑1 (MQ=255)
                                                                                                  aGGTCGGATAAGACGGATGGCGTCGCATCCGACctacagttcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcatcggctgtcga   <  2:1077965‑M2/100‑68 (MQ=255)
                                                                                                   ggTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcgga  <  1:2185279‑M2/100‑69 (MQ=255)
                                                                                                   ggTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCaaaa  >  1:743436/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAA  >  NC_000913/349839‑350037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.