BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2511409	NA (NA)	5 (0.040)	5/164	NT	NA	noncoding (58/88 nt)	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 2511439	NA (NA)	5 (0.040)	5/164	NT	NA	noncoding (88/88 nt)	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 143 total aligned reads displayed.

CATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCA  >  NC_000913/2511310‑2511508

cATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAg                                                                                                     >  1:1744826/1‑100 (MQ=255)

  tGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGgg                                                                                                   >  1:1325560‑M1/1‑98 (MQ=255)

  tGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGgg                                                                                                   <  1:765658‑M1/100‑3 (MQ=255)

  tGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGg                                                                                                    <  1:3074780‑M1/99‑2 (MQ=255)

   gggCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGggc                                                                                                  >  1:459932‑M1/1‑97 (MQ=255)

      cACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGggcgga                                                                                               >  2:1327615‑M1/1‑94 (MQ=255)

        ncGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATa                                                                                             >  1:1038779/2‑100 (MQ=255)

          gCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAg                                                                                           >  2:229117/1‑100 (MQ=255)

            cATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCTTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGc                                                                                         <  2:1755659/100‑1 (MQ=255)

             aTTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCg                                                                                        <  1:2853189/100‑1 (MQ=255)

               tAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGtt                                                                                      >  2:2413916/1‑100 (MQ=255)

               tAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCCAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGtt                                                                                      >  2:1786502/1‑100 (MQ=255)

                 aaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGttt                                                                                     <  1:212111/99‑1 (MQ=255)

                   cgcgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCGGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcg                                                                                  <  1:2747544/100‑1 (MQ=255)

                    gcgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgc                                                                                 <  2:836417/100‑1 (MQ=255)

                    gcgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgc                                                                                 <  1:2461934/100‑1 (MQ=255)

                    gcgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgc                                                                                 >  2:2354058/1‑100 (MQ=255)

                     cgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgcc                                                                                <  1:2193799/100‑1 (MQ=255)

                     cgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgcc                                                                                <  1:465878/100‑1 (MQ=255)

                      gTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgccg                                                                               >  2:3174514/1‑100 (MQ=255)

                        ccGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCA                                                                             <  1:666236‑M2/100‑1 (MQ=255)

                         cGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCAT                                                                            <  1:1849431‑M2/100‑1 (MQ=255)

                         cGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCAT                                                                            <  2:2048288‑M2/100‑1 (MQ=255)

                         cGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCAT                                                                            <  2:2074744‑M2/100‑1 (MQ=255)

                         cGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCAT                                                                            <  1:385524‑M2/100‑1 (MQ=255)

                         cGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCAT                                                                            <  2:2815308‑M2/100‑1 (MQ=255)

                          gCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATC                                                                           <  1:3011952‑M2/100‑1 (MQ=255)

                           ccAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAGCCGGCTCTTTAACGCGTAGggcggatgcggcgtaaacgccttatcc                                                                          <  1:549937‑M1/100‑28 (MQ=255)

                             aaTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGC                                                                        <  2:2631085‑M2/100‑1 (MQ=255)

                              aTGGAGGACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC                                                                       >  1:1418882‑M2/1‑100 (MQ=255)

                              aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC                                                                       <  1:538845‑M2/100‑1 (MQ=255)

                              aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC                                                                       >  2:3077543‑M2/1‑100 (MQ=255)

                              aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC                                                                       >  1:1887175‑M2/1‑100 (MQ=255)

                              aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC                                                                       >  1:2280412‑M2/1‑100 (MQ=255)

                              aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC                                                                       >  1:1942571‑M2/1‑100 (MQ=255)

                                  aGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGggcggatgcggcgtaaacgccttatccgccctac                                                                   <  1:479070‑M1/100‑35 (MQ=255)

                                    cacaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGggcggatgcggcgtaaacgccttatccgccctacgc                                                                 <  1:2245636‑M1/100‑37 (MQ=255)

                                    cacaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGt                                                                 >  1:1530172/1‑100 (MQ=255)

                                     acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTg                                                                <  1:3036771/100‑1 (MQ=255)

                                     acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTg                                                                <  2:2815341/100‑1 (MQ=255)

                                      caATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGc                                                               >  1:758860/1‑100 (MQ=255)

                                       actGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGcc                                                              <  1:1690628/98‑1 (MQ=255)

                                       aaTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCACTAGTGc                                                               <  2:148596/99‑1 (MQ=255)

                                        aTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCa                                                             >  2:1140630/1‑100 (MQ=255)

                                          gCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGa                                                           <  1:1496942/100‑1 (MQ=255)

                                           ccTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGAt                                                          >  1:1441519/1‑100 (MQ=255)

                                            cTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATg                                                         <  2:1188644/100‑1 (MQ=255)

                                            cTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATg                                                         <  1:1559676/100‑1 (MQ=255)

                                             tGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGc                                                        <  2:2988115/100‑1 (MQ=255)

                                              gATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGc                                                        <  2:2379757/99‑1 (MQ=255)

                                                tGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGACGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGAc                                                     <  2:1744821/100‑1 (MQ=255)

                                                 gCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACg                                                    <  1:376894/100‑1 (MQ=255)

                                                  cGACGCTAGTGCGTCTTATCAGGCCTACAAGCCAGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCGGATGCGACGc                                                   >  2:2152870/1‑100 (MQ=255)

                                                  cGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGc                                                   >  1:869799/1‑100 (MQ=255)

                                                  cGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGc                                                   >  1:43138/1‑100 (MQ=255)

                                                   gACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCt                                                  >  1:2967950/1‑100 (MQ=255)

                                                    aCGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTc                                                 <  2:2448765/100‑1 (MQ=255)

                                                     cGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCa                                                <  1:724974/100‑1 (MQ=255)

                                                      gCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCAt                                               <  2:2342718/100‑1 (MQ=255)

                                                           tGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAAc                                          >  1:1951452/1‑100 (MQ=255)

                                                                 ttATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACaa                                     <  1:880615/99‑1 (MQ=255)

                                                                 ttATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAAt                                    <  1:2970637/100‑1 (MQ=255)

                                                                 ttATCAGGCCTACAAACCGGCACTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCctacgcgttaaatagccggtttgtaggcctgcta                                     <  1:2663731‑M2/99‑35 (MQ=255)

                                                                  tagcaggCCTACAAACCGGCTATTTAACGCGTAGggcggatgcggcgtaaacgccttatccgccctacgcgttaaagtgccggtttgtaggcctgataa                                    <  1:2663731‑M1/96‑66 (MQ=255)

                                                                  tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc                                   <  2:1959612/100‑1 (MQ=255)

                                                                  tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc                                   <  1:1687259/100‑1 (MQ=255)

                                                                  tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc                                   >  1:3194683/1‑100 (MQ=255)

                                                                  tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc                                   >  1:1309326/1‑100 (MQ=255)

                                                                  tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCACTCAACTACAATc                                   <  1:361509/100‑1 (MQ=255)

                                                                    tCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATccc                                 <  2:160692/100‑1 (MQ=255)

                                                                     cAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCa                                >  2:1553528/1‑100 (MQ=255)

                                                                     cAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCa                                >  1:740987/1‑100 (MQ=255)

                                                                     cAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCa                                <  1:2487779/100‑1 (MQ=255)

                                                                      aGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAg                               <  2:420190/100‑1 (MQ=255)

                                                                       ggCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAgc                              >  1:3239883/1‑100 (MQ=255)

                                                                         ccTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCCgcgc                            >  2:1833245/1‑100 (MQ=255)

                                                                         ccTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAgcgc                            >  1:1126251/1‑100 (MQ=255)

                                                                          cTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGcc                           >  1:3142584/1‑100 (MQ=255)

                                                                           tACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCg                          <  2:1849425/100‑1 (MQ=255)

                                                                           tACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCg                          <  2:385521/100‑1 (MQ=255)

                                                                              aaaCCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCgaga                       >  2:1903795/1‑97 (MQ=255)

                                                                               aaCCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTcc                       <  1:801526/99‑1 (MQ=255)

                                                                                aCCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTcccc                     <  1:3108365/100‑1 (MQ=255)

                                                                                  cGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccac                   <  1:713883/100‑1 (MQ=255)

                                                                                   ggCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGCCGCTCATTCAACTACAATCCCAGCGCCGTCCccacc                  >  1:1370612/1‑100 (MQ=255)

                                                                                   ggCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccacc                  <  1:2354068/100‑1 (MQ=255)

                                                                                   ggCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCccacc                  <  1:229119/100‑1 (MQ=255)

                                                                                     ctctTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACcaa                >  2:3148405/1‑100 (MQ=255)

                                                                                      tctTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACcaac               >  1:1474377/1‑100 (MQ=255)

                                                                                       ctTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACcaaca              <  2:740985/100‑1 (MQ=255)

                                                                                        tttAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACcaacaa             >  1:2685235/1‑100 (MQ=255)

                                                                                        tttAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACcaacaa             <  2:3096999/100‑1 (MQ=255)

                                                                                           aaCGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCa          <  1:1130101/100‑1 (MQ=255)

                                                                                             cgcgTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGa        >  2:769089/1‑100 (MQ=255)

                                                                                              gcgTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCctacgcgttaaagagccggtttgtaggcctgataagacgcactagcgtcgcatcaggcattgtg       <  1:2245636‑M2/100‑65 (MQ=255)

                                                                                              gcgTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAGCAACCAGat       <  1:2790694/100‑1 (MQ=255)

                                                                                              gcgTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGat       <  2:500001/100‑1 (MQ=255)

                                                                                               cgTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGata      >  1:2874505/1‑100 (MQ=255)

                                                                                               cgTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGata      >  2:1399125/1‑100 (MQ=255)

                                                                                                gTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCctacgcgttaaagagccggtttgtaggcctgataagacgcactagcgtcgcatcaggcattgtgct     <  1:479070‑M2/100‑67 (MQ=255)

CATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCCGTCCCCACCAACAACCAGATATTCA  >  NC_000913/2511310‑2511508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.