BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2662311 =	NA (NA)	8 (0.070)	7/168	NT	NA	noncoding (3/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
*	?	NC_000913	2662337 =	NA (NA)	8 (0.070)	7/168	NT	NA	noncoding (29/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 169 total aligned reads displayed.

GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410

ncgtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggc                                                                                                     <  2:2641722‑M1/1‑1 (MQ=255)

gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCCTTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     >  1:410498/1‑100 (MQ=255)

gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     >  1:306559/1‑100 (MQ=255)

gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     >  2:2916829/1‑100 (MQ=255)

 aCATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCg                                                                                                    <  2:506919/100‑1 (MQ=255)

  cATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCgg                                                                                                   <  2:825365/100‑1 (MQ=255)

   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  <  2:1042427‑M1/4‑1 (MQ=255)

     ggtcggataaggcgttcacgccgcagccgacagccgttgcctgatgcgacgcgtaatgcggcttatcaggcctacagtgtacagaaccccagggCGGAt                                                                                                 <  2:2914268‑M1/5‑1 (MQ=255)

      cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgc                                                                                               >  2:334477/1‑100 (MQ=255)

           gTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGt                                                                                          >  1:1714147/1‑100 (MQ=255)

            tAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTg                                                                                         <  1:852097/100‑1 (MQ=255)

            tAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTg                                                                                         <  1:2132853/100‑1 (MQ=255)

              acttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGaa                                                                                       >  1:2209138/3‑100 (MQ=255)

              aaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGaa                                                                                       <  1:334480/100‑1 (MQ=255)

              aaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGaa                                                                                       >  2:2456671/1‑100 (MQ=255)

                ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                     <  2:2976145/100‑1 (MQ=255)

                 tGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGc                                                                                    <  2:1212033/100‑1 (MQ=255)

                  ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCGTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   <  1:1540923/100‑1 (MQ=255)

                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  >  2:409700/1‑100 (MQ=255)

                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  <  2:1526680/100‑1 (MQ=255)

                     cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  2:2861413/1‑100 (MQ=255)

                       aCTATTTACTTGACTGATTTAGTCAGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              >  2:1990700/1‑100 (MQ=255)

                        cTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATcc                                                                             <  2:1018526/100‑1 (MQ=255)

                          aTTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTCAACGCCATATcc                                                                             <  2:636157/98‑1 (MQ=255)

                           tttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACATGTTGTCGGATGCGGCGTGAACGCCATATCCGcc                                                                          >  2:941328/1‑100 (MQ=255)

                           gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGcc                                                                          >  1:20548‑M1/73‑100 (MQ=255)

                            catccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGccc                                                                         >  1:472284‑M1/72‑100 (MQ=255)

                             tACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCt                                                                        <  1:983989/100‑1 (MQ=255)

                             atccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCt                                                                        >  1:2542928‑M1/71‑100 (MQ=255)

                              tccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTg                                                                       >  1:1740330‑M1/70‑100 (MQ=255)

                              aCTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTg                                                                       >  1:2496832/1‑100 (MQ=255)

                               cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                      <  1:531687/100‑1 (MQ=255)

                                ttGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTggg                                                                     >  1:2317868/1‑100 (MQ=255)

                                 gacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    >  2:1078715‑M1/67‑100 (MQ=255)

                                    ntGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 >  1:2641734/2‑100 (MQ=255)

                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  1:2693236/100‑1 (MQ=255)

                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  1:530356/100‑1 (MQ=255)

                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTGTTATCGTGGCGTTTGTACCTGTGGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  2:1426162/100‑1 (MQ=255)

                                       aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTTTTTTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              >  1:2860415/1‑100 (MQ=255)

                                       aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              <  1:1227100/100‑1 (MQ=255)

                                         ttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTac                                                            <  2:2535523/100‑1 (MQ=255)

                                         ttAGGCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              <  2:27441/98‑1 (MQ=255)

                                           aGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                          <  2:2009966/100‑1 (MQ=255)

                                            gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCTTATCCGCCCTGCGGTTCTGTTCACt                                                         >  2:2056966/1‑100 (MQ=255)

                                            gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                         >  1:3144057/1‑100 (MQ=255)

                                            gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                         >  2:2358349/1‑100 (MQ=255)

                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  1:1163373/1‑100 (MQ=255)

                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  2:2533577/1‑100 (MQ=255)

                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  1:1944068/1‑100 (MQ=255)

                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGGTCTGTACACTGt                                                       >  2:2334839/1‑100 (MQ=255)

                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATAGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  1:3105461/1‑100 (MQ=255)

                                               gggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTa                                                      >  2:164915/1‑100 (MQ=255)

                                                ggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAg                                                     <  2:3067336/100‑1 (MQ=255)

                                                 gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAgg                                                    <  1:2352512/100‑1 (MQ=255)

                                                   aTTTAACCTTCAGTGCCATTTTTTTATCTTTTCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGc                                                   >  2:2549350/1‑99 (MQ=255)

                                                   aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                  <  1:1372479/100‑1 (MQ=255)

                                                    tttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCt                                                 >  2:2875465/1‑100 (MQ=255)

                                                     ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                >  2:3207058/1‑100 (MQ=255)

                                                       aaCCTTCAGTGCCATTTTTTTATCTTGGCGTTTGTACCTGTTTTCAGATTCGTCGTGAACGCCATATCCGCGCTGCGGTTCTGTACCCTCTAGGCCTGa                                               >  2:1063650/1‑99 (MQ=255)

                                                       aaCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGAt                                              <  1:306100/100‑1 (MQ=255)

                                                        aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             >  2:455904/1‑100 (MQ=255)

                                                        aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             <  2:1492069/100‑1 (MQ=255)

                                                        aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             >  1:450669/1‑100 (MQ=255)

                                                         ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                            <  1:1990706/100‑1 (MQ=255)

                                                         ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                            >  1:810673/1‑100 (MQ=255)

                                                            tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                         <  2:1858109/100‑1 (MQ=255)

                                                              aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACg                                        <  2:541542/99‑1 (MQ=255)

                                                              aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGc                                       <  1:2870735/100‑1 (MQ=255)

                                                               gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                      <  1:879218/100‑1 (MQ=255)

                                                               gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                      <  2:2318763/100‑1 (MQ=255)

                                                                 gCCATTTTTTTATTTTGTCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCAtt                                    >  2:1293929/1‑100 (MQ=255)

                                                                 gCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCAtt                                    >  2:330606/1‑100 (MQ=255)

                                                                   cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTAc                                  >  2:2239043/1‑100 (MQ=255)

                                                                    aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                 >  1:1236034/1‑100 (MQ=255)

                                                                    aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                 >  1:1659372/1‑100 (MQ=255)

                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             >  2:3101668/1‑100 (MQ=255)

                                                                          ttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGc                           >  1:2188373/1‑100 (MQ=255)

                                                                          ttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGc                           >  1:2973593/1‑100 (MQ=255)

                                                                              cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCa                       <  1:2456681/100‑1 (MQ=255)

                                                                              cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCa                       >  1:829257/1‑100 (MQ=255)

                                                                                tGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAgg                     <  2:700084/100‑1 (MQ=255)

                                                                                tGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAgg                     >  1:718754/1‑100 (MQ=255)

                                                                                   cGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCaa                  >  1:1042429/1‑100 (MQ=255)

                                                                                    gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGGATTACGCGTCGCATCAGGCAAc                 <  2:1901716/100‑1 (MQ=255)

                                                                                     tttGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACg                >  2:208495/1‑100 (MQ=255)

                                                                                     tttGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACg                <  2:1560760/100‑1 (MQ=255)

                                                                                       tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              <  1:2995183/100‑1 (MQ=255)

                                                                                       tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              >  1:1387086/1‑100 (MQ=255)

                                                                                       tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              <  2:1659368/100‑1 (MQ=255)

                                                                                         tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg            >  2:1737614/1‑100 (MQ=255)

                                                                                         tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg            <  2:1361441/100‑1 (MQ=255)

                                                                                          aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt           >  2:2136542/1‑100 (MQ=255)

                                                                                          aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt           >  1:2482366/1‑100 (MQ=255)

                                                                                          aCCTGTCGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt           >  2:1092809/1‑100 (MQ=255)

                                                                                             tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGGCGCATCAGGCAACGGCTGTCg         <  1:501235/99‑1 (MQ=255)

                                                                                              gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc          >  2:2153635/1‑97 (MQ=255)

                                                                                              gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       >  1:345508/1‑100 (MQ=255)

                                                                                                 gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc    >  1:1362416/1‑100 (MQ=255)

                                                                                                  gCGGATATGGCGTTCACGCCGCATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc    <  1:2277928‑M1/98‑1 (MQ=255)

                                                                                                   CGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcgg  <  1:1048434‑M1/100‑1 (MQ=255)

GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.