BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4254000	NA (NA)	10 (0.090)	6/164	NT	NA	noncoding (100/130 nt)	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
*	?	NC_000913	= 4254030	NA (NA)	10 (0.090)	6/164	NT	NA	noncoding (130/130 nt)	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 163 total aligned reads displayed.

GCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAA  >  NC_000913/4253901‑4254099

gCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAg                                                                                                     <  1:2938786/100‑1 (MQ=255)

  cGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgc                                                                                                   >  2:3189862‑M1/1‑98 (MQ=255)

   ggATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCACTTTATTGAATTTGCAGATTATGGAAGgcc                                                                                                  >  1:1439875‑M1/1‑97 (MQ=255)

    gatgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgcc                                                                                                  <  2:1448750‑M1/99‑4 (MQ=255)

     atgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccgg                                                                                                <  1:1796500‑M1/100‑6 (MQ=255)

      tgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccgga                                                                                               >  2:675266‑M1/1‑94 (MQ=255)

       gatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggat                                                                                              >  1:1324871‑M1/1‑93 (MQ=255)

        atcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATa                                                                                             >  1:1709259/1‑100 (MQ=255)

          catcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAg                                                                                           >  1:811355/1‑100 (MQ=255)

          catcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAg                                                                                           >  2:1282038/1‑100 (MQ=255)

          catcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAg                                                                                           <  1:54164/100‑1 (MQ=255)

            tcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGc                                                                                         <  2:384272/100‑1 (MQ=255)

             ccGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCGCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCg                                                                                        >  2:1754094/1‑100 (MQ=255)

                 cTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGtttt                                                                                    >  1:2460071/1‑100 (MQ=255)

                    tcttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcgc                                                                                 >  1:2588078/1‑100 (MQ=255)

                    tcttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcgc                                                                                 >  1:1451762/1‑100 (MQ=255)

                     cttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcgcc                                                                                <  1:2706346/100‑1 (MQ=255)

                     cttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcgcc                                                                                <  2:2739618/100‑1 (MQ=255)

                     cttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcgcc                                                                                <  1:1260633/100‑1 (MQ=255)

                      ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggatgcggcgaaaacgcct                                                                               >  2:371058‑M1/1‑78 (MQ=255)

                         tGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCAT                                                                            <  1:786369‑M2/100‑1 (MQ=255)

                          gggTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggatgcggcgaaaacgccttatc                                                                           <  1:1126896‑M1/100‑27 (MQ=255)

                          gggTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATC                                                                           <  2:2901211‑M2/100‑1 (MQ=255)

                           ggTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggatgcggcgaaaacgccttatcc                                                                          <  1:120452‑M1/100‑28 (MQ=255)

                            gTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCG                                                                         <  1:780840‑M2/100‑1 (MQ=255)

                             ttGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggatgcggcgaaaacgccttatccgg                                                                        <  1:2235484‑M1/100‑30 (MQ=255)

                              tGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgcctgatgcggcgaaaacgccttatccggc                                                                       <  1:1996310‑M1/100‑31 (MQ=255)

                              tGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGC                                                                       <  2:1491892‑M2/100‑1 (MQ=255)

                               gCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCa                                                                      >  1:2899978/1‑100 (MQ=255)

                               gCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCa                                                                      >  2:2079172/1‑100 (MQ=255)

                               gCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCa                                                                      <  1:3268890/100‑1 (MQ=255)

                                ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaa                                                                     >  1:2445721/1‑100 (MQ=255)

                                 cTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAAt                                                                    >  2:2183023/1‑100 (MQ=255)

                                   gATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtc                                                                  >  1:4137/1‑100 (MQ=255)

                                     tGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctc                                                                <  1:105126/100‑1 (MQ=255)

                                       cgcgGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctctc                                                              >  2:1156397/1‑100 (MQ=255)

                                       cgcgGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctctc                                                              >  2:171527/1‑100 (MQ=255)

                                          ggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGa                                                           >  2:2888082/1‑100 (MQ=255)

                                            cgcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAtt                                                         >  1:2295279/1‑100 (MQ=255)

                                            cgcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGAtt                                                         >  2:1765858/1‑100 (MQ=255)

                                              cTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTAc                                                       >  2:2953111/1‑100 (MQ=255)

                                              cTTCTCAGGCCTACACAACACATCGCAATTTATTAAATTTGCAGATTATGGAAGGCCGGATAAAGCGATTTCGCCGCATCCAGCAATTCTCTCTGATTa                                                        <  2:657052/99‑1 (MQ=38)

                                                   cAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTc                                                  >  1:219094/1‑100 (MQ=255)

                                                     ggCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGc                                                <  1:1675269/100‑1 (MQ=255)

                                                     ggCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGc                                                >  1:497307/1‑100 (MQ=255)

                                                      gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                               <  1:3110749/100‑1 (MQ=255)

                                                      gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                               <  2:1444472/100‑1 (MQ=255)

                                                        cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCt                                             <  1:1543732/100‑1 (MQ=255)

                                                         tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTg                                            <  2:1324868/100‑1 (MQ=255)

                                                         tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTg                                            <  1:2404620/100‑1 (MQ=255)

                                                          acacaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTgn                                           <  1:649290/100‑2 (MQ=255)

                                                             caacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCAGGCAATTCTATCTGATTACCCTTCGCCCTGCGt                                         >  2:1620876/1‑99 (MQ=255)

                                                              aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCg                                       <  1:3099177/100‑1 (MQ=255)

                                                              aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCg                                       <  1:956606/100‑1 (MQ=255)

                                                              aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCg                                       <  1:1754099/100‑1 (MQ=255)

                                                                cacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCa                                     <  2:1927687/100‑1 (MQ=255)

                                                                  caTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCAct                                   >  2:2116990/1‑100 (MQ=255)

                                                                  caTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCAct                                   >  1:287970/1‑100 (MQ=255)

                                                                   aTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCActc                                  >  1:2197613/1‑100 (MQ=255)

                                                                     cgaaagttATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGGCGCATCCGGCAATTCTCTCTGATTTCCCTTCGCCCTGCGTCGCACtctc                                <  2:860088/94‑1 (MQ=37)

                                                                     cGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAGGGGGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACtctc                                <  2:2295270/100‑1 (MQ=255)

                                                                     cGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCcttccataatctgcaaattcaataaattgcgatgtgttg                                <  1:371061‑M2/100‑40 (MQ=255)

                                                                     cGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACtctc                                <  2:1639941/100‑1 (MQ=255)

                                                                     cGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACtctc                                >  1:1985130/1‑100 (MQ=255)

                                                                      gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCa                               <  2:2588066/100‑1 (MQ=255)

                                                                      gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCa                               >  1:1919965/1‑100 (MQ=255)

                                                                       cAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCaa                              <  2:2465319/100‑1 (MQ=255)

                                                                        aaTTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAAt                             >  2:2405001/1‑100 (MQ=255)

                                                                          tttATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCg                           <  2:2992058/100‑1 (MQ=255)

                                                                            tATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTc                         <  1:164825/100‑1 (MQ=255)

                                                                            tATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTc                         >  2:2980291/1‑100 (MQ=255)

                                                                             aTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCa                        <  1:1356488/100‑1 (MQ=255)

                                                                              ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaa                       >  1:286403/1‑100 (MQ=255)

                                                                              ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaa                       >  2:1384492/1‑100 (MQ=255)

                                                                              ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaa                       >  1:3051148/1‑100 (MQ=255)

                                                                              ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaa                       <  1:3169679/100‑1 (MQ=255)

                                                                               tGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaaa                      >  1:2939382/1‑100 (MQ=255)

                                                                               tGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCaaa                      >  1:1546286/1‑100 (MQ=255)

                                                                                gAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAAc                     >  1:105978/1‑100 (MQ=255)

                                                                                gAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAAc                     <  2:3042014/100‑1 (MQ=255)

                                                                                gAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAAc                     >  1:1089971/1‑100 (MQ=255)

                                                                                gAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAAc                     <  1:27915/100‑1 (MQ=255)

                                                                                    ttGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCAc                 <  1:257089/100‑1 (MQ=255)

                                                                                      gCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGt               >  1:2284932/1‑100 (MQ=255)

                                                                                       cAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTc              >  2:1207805/1‑100 (MQ=255)

                                                                                       cAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTc              >  2:326955/1‑100 (MQ=255)

                                                                                         gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTg            >  2:2660759/1‑100 (MQ=255)

                                                                                         gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTg            >  2:1298848/1‑100 (MQ=255)

                                                                                         gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTg            >  1:2730720/1‑100 (MQ=255)

                                                                                         gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCGCTGATCACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCt             >  2:517703/1‑99 (MQ=255)

                                                                                           ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGAt          >  2:2141243/1‑100 (MQ=255)

                                                                                              tGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTa       >  2:3064707/1‑100 (MQ=255)

                                                                                              tGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTa       >  2:2868850/1‑100 (MQ=255)

                                                                                               ggAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTaa      >  2:16991/1‑100 (MQ=255)

                                                                                                gAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAAt     >  2:1492596/1‑100 (MQ=255)

                                                                                                gAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAAt     <  1:2096291/100‑1 (MQ=255)

                                                                                                gAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAAt     >  2:2415498/1‑100 (MQ=255)

                                                                                                 aaGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATc    <  1:3235984/100‑1 (MQ=255)

                                                                                                  aGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCa   <  1:675268/100‑1 (MQ=255)

                                                                                                   ggCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCaa  >  1:863608/1‑100 (MQ=255)

GCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAA  >  NC_000913/4253901‑4254099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.