Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,489,197 C→T 100% D322D (GAC→GAT aldA → aldehyde dehydrogenase A, NAD‑linked

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,489,1970CT95.6% 334.8 / 3.1 107D322D (GAC→GATaldAaldehyde dehydrogenase A, NAD‑linked
Reads supporting (aligned to +/- strand):  ref base C (3/2);  new base T (57/45);  total (60/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.77e-01

Only 100 of 108 total aligned reads displayed.

TGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGG  >  NC_000913/1489101‑1489292
                                                                                                |                                                                                               
tgtTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATAtt                                                                                              >  1:306601/1‑100 (MQ=255)
  tttATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGc                                                                                            <  1:2016135/100‑1 (MQ=255)
    tATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGa                                                                                          >  1:2986406/1‑100 (MQ=255)
    tATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGa                                                                                          >  1:1475799/1‑100 (MQ=255)
       gTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATgg                                                                                       <  1:1708177/100‑1 (MQ=255)
        tACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATggg                                                                                      <  1:917578/100‑1 (MQ=255)
        tACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATggg                                                                                      >  1:2226759/1‑100 (MQ=255)
        tACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATggg                                                                                      >  2:2071564/1‑100 (MQ=255)
        tACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATgg                                                                                       >  2:2115493/1‑99 (MQ=255)
        tACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATggg                                                                                      >  2:413434/1‑100 (MQ=255)
          cAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGc                                                                                    <  1:810875/100‑1 (MQ=255)
          cAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGc                                                                                    >  2:3214434/1‑100 (MQ=255)
          cAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGc                                                                                    <  1:1644072/100‑1 (MQ=255)
          cAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGc                                                                                    <  2:1847549/100‑1 (MQ=255)
           aGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGcc                                                                                   >  1:1073730/1‑100 (MQ=255)
           aGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGcc                                                                                   >  1:2326859/1‑100 (MQ=255)
            gAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCg                                                                                  >  2:2960837/1‑100 (MQ=255)
            gAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCg                                                                                  >  2:1097135/1‑100 (MQ=255)
              aaGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGtt                                                                                >  2:2437036/1‑100 (MQ=255)
              aaGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGtt                                                                                <  1:1184955/100‑1 (MQ=255)
               aGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCg                                                                                  >  2:2910654/1‑97 (MQ=255)
               aGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTg                                                                               <  2:3119539/100‑1 (MQ=255)
                ggCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGa                                                                              >  2:1714987/1‑100 (MQ=255)
                agCATTTATGATCAGGTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCTGCTGAACGCAACGACATTGCGATGGGACCGTTGa                                                                              <  1:3236140/99‑1 (MQ=255)
                     ttATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATGGGGCCGTTGATTAAc                                                                         <  2:2946384/100‑1 (MQ=255)
                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAAcg                                                                        <  2:201724/100‑1 (MQ=255)
                      tATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAAcg                                                                        >  2:82966/1‑100 (MQ=255)
                         gATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAAcgccg                                                                     >  2:846918/1‑100 (MQ=255)
                         gATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAAcgc                                                                       >  2:2996799/1‑98 (MQ=255)
                          aTCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAAcgccgc                                                                    >  2:820006/1‑100 (MQ=255)
                            cAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCgcgg                                                                  >  2:2906039/1‑100 (MQ=255)
                            cAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCgcgg                                                                  <  1:3164841/100‑1 (MQ=255)
                             aGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCgcggc                                                                 >  2:2001162/1‑100 (MQ=255)
                             aGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCgcggc                                                                 >  2:563958/1‑100 (MQ=255)
                              gTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGGTTAACGCCgcggcg                                                                >  1:503822/1‑100 (MQ=255)
                              gTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCAGTGATTAACGCCgcggcg                                                                >  1:1473166/1‑100 (MQ=255)
                                tCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCt                                                              <  2:1699861/100‑1 (MQ=255)
                                 cGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTg                                                             >  2:2833754/1‑100 (MQ=255)
                                  gTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGCTTAACGCCGCGGCGCTgg                                                            >  2:180509/1‑100 (MQ=255)
                                  gTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTgg                                                            >  1:1077668/1‑100 (MQ=255)
                                   tCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGa                                                           <  1:2930193/100‑1 (MQ=255)
                                   tCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGa                                                           >  1:2377448/1‑100 (MQ=255)
                                   tCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGa                                                           <  2:1541582/100‑1 (MQ=255)
                                   tCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGa                                                           <  1:2071571/100‑1 (MQ=255)
                                   tCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGa                                                           >  2:2380142/1‑100 (MQ=255)
                                        cGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCTATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAggg                                                      <  2:1746821/100‑1 (MQ=255)
                                        cGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAggg                                                      >  2:2199409/1‑100 (MQ=255)
                                        cGGCTGGGTGAAGCGATGCAGGCGGTCCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAgg                                                       <  1:2323710/99‑1 (MQ=255)
                                         ngCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAggg                                                      >  1:2589516/2‑99 (MQ=255)
                                         ggCTGGGTGATGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGt                                                     >  2:819835/1‑100 (MQ=255)
                                          gCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAggggc                                                    >  1:509995/1‑98 (MQ=255)
                                            tGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGa                                                  <  1:2910670/100‑1 (MQ=255)
                                             gggTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAg                                                 <  1:2541556/100‑1 (MQ=255)
                                             gggTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAg                                                 <  1:1702607/100‑1 (MQ=255)
                                              ggTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGGCGAGc                                                >  1:1453661/1‑100 (MQ=255)
                                               gTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGGCGAGCa                                               >  1:3026644/1‑100 (MQ=255)
                                                tGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCaa                                              >  1:228170/1‑100 (MQ=255)
                                                tGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCaa                                              >  1:259808/1‑100 (MQ=255)
                                                 gAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGCTTAACGGCGGGGCGGTGGAAAGGGGCGAGcga                                              >  1:1027606/1‑97 (MQ=255)
                                                  aaGCGAGGCAGGCGGTTCAATTTGGTTACCCCGGTGAATGCAACTGTATTGCGTTTGGGCGGTGGATTAACGCCGCGGCGCGGGAAAGGGGCGAGGaa                                              >  2:657665/1‑98 (MQ=255)
                                                   aGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCaaaa                                            >  1:2591939/1‑99 (MQ=255)
                                                    gCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAg                                          <  1:593783/100‑1 (MQ=255)
                                                    gCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAg                                          <  1:2573722/100‑1 (MQ=255)
                                                       aTGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACCATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTgg                                       <  1:2346410/100‑1 (MQ=255)
                                                        tGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGgc                                      >  2:553503/1‑100 (MQ=255)
                                                            ggCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGgcgcgc                                  >  1:632865/1‑100 (MQ=255)
                                                            ggCGGTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGgcgcgc                                  >  1:3008028/1‑100 (MQ=255)
                                                               ggTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCa                               >  1:352049/1‑100 (MQ=255)
                                                               ggTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGGTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGAGCa                               >  1:1308884/1‑100 (MQ=255)
                                                                gTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAg                              >  1:238783/1‑100 (MQ=255)
                                                                gTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAg                              >  1:318111/1‑100 (MQ=255)
                                                                gTTCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAg                              >  1:1874335/1‑100 (MQ=255)
                                                                 ttCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGt                             <  1:2998584/100‑1 (MQ=255)
                                                                  tCAATTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGt                             >  2:1899876/1‑99 (MQ=255)
                                                                    aaTTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTaga                          <  2:2226749/100‑1 (MQ=255)
                                                                    aaTTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTaga                          >  1:473420/1‑100 (MQ=255)
                                                                     aTTTGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAGAGGGTCGAGCAAAAAGTGGCGCGCGCAGTagaa                         >  1:323080/1‑100 (MQ=255)
                                                                      tttGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTagaag                        <  2:3159791/100‑1 (MQ=255)
                                                                        tGGTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAgaagaa                      <  1:853934/100‑1 (MQ=255)
                                                                         ggTAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGaagaag                     >  1:2632092/1‑100 (MQ=255)
                                                                           tAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAggg                   <  2:306598/100‑1 (MQ=255)
                                                                           tAACCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAggg                   <  2:259806/100‑1 (MQ=255)
                                                                            aaCCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAgggg                  <  2:2696572/100‑1 (MQ=255)
                                                                             aCCCCGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGc                 <  1:3099672/100‑1 (MQ=255)
                                                                              ccccGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGGGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCg                >  2:142147/1‑100 (MQ=255)
                                                                              ccccGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCg                >  2:1731077/1‑100 (MQ=255)
                                                                              ccccGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCg                >  1:461284/1‑100 (MQ=255)
                                                                               cccGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCga               <  1:9677/100‑1 (MQ=255)
                                                                                ccGCTGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCgag              <  1:2959735/100‑1 (MQ=255)
                                                                                    tGAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTg          <  1:82966/100‑1 (MQ=255)
                                                                                     gAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTgg         >  2:1344579/1‑100 (MQ=255)
                                                                                     gAACGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTgg         <  1:2182462/100‑1 (MQ=255)
                                                                                      aaCGCAACGATATTGCCATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGc        <  2:1915232/100‑1 (MQ=255)
                                                                                       aCGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCg       <  2:803187/100‑1 (MQ=255)
                                                                                        cGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGt      <  1:2428880/100‑1 (MQ=255)
                                                                                        cGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGt      >  2:1219929/1‑100 (MQ=255)
                                                                                        cGCAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGt      <  1:1626578/100‑1 (MQ=255)
                                                                                          cAACGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTc    >  2:1547721/1‑100 (MQ=255)
                                                                                          cAACGATATTGCGATGGGGCCATTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTc    <  2:1473162/100‑1 (MQ=255)
                                                                                            aCGATATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCgg  >  1:2172862/1‑100 (MQ=255)
                                                                                                |                                                                                               
TGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGG  >  NC_000913/1489101‑1489292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: