| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,757,662 | (T)8→7 | coding (939/957 nt) | yfjH ← | CP4‑57 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,757,655 | 0 | T | . | 95.0% | 585.7 / 24.4 | 141 | coding (946/957 nt) | yfjH | CP4‑57 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base T (6/1); new base . (67/67); total (73/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 | |||||||||||
Only 100 of 157 total aligned reads displayed.
TGCTCCTTTTGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCATCTTG > NC_000913/2757557‑2757748 | cTCCTTTTGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttt < 1:969924/100‑1 (MQ=255) tCCTTTTGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCttttt < 1:859716/100‑1 (MQ=255) ccTTTTGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttt > 1:2202956/1‑100 (MQ=255) ttttGCAACGTATCACTTGTAAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttttc < 2:2087364/100‑2 (MQ=255) tttGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttttct < 2:1145888/100‑3 (MQ=255) tttGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttttct > 2:137730/1‑98 (MQ=255) ttGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttttcta < 1:2522066/100‑4 (MQ=255) ttGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCCATATGGCAAGTAGTAATTATTTACTTCtttttttcta < 1:1636688/100‑4 (MQ=255) tGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttttctac < 2:1488023/100‑5 (MQ=255) tGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCtttttttctac < 1:1408431/100‑5 (MQ=255) gCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACg > 1:348703/1‑100 (MQ=255) gCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACg < 1:2579652/100‑1 (MQ=255) cAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGa > 2:2194851/1‑100 (MQ=255) cttATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACa < 1:1368607/98‑1 (MQ=255) tATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACaag > 2:1368612/1‑98 (MQ=255) aTCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAgcg < 2:2035705/100‑1 (MQ=255) aTCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAgcg < 2:2222301/100‑1 (MQ=255) cACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCt > 2:505666/1‑100 (MQ=255) cACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCt > 1:1990500/1‑100 (MQ=255) aCTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTa > 1:3061172/1‑100 (MQ=255) tGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCg > 2:2733939/1‑100 (MQ=255) tGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCg > 1:875769/1‑100 (MQ=255) tGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCg > 2:764757/1‑100 (MQ=255) tCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGaa < 1:1648951/100‑1 (MQ=255) cAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGaaa > 1:1697870/1‑100 (MQ=255) cAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGaaa > 2:21089/1‑100 (MQ=255) aataaataGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTTCTACGAACAGCGCTATCGaaa < 2:614389/100‑1 (MQ=255) aataaataGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAg > 1:2217482/1‑100 (MQ=255) aataaataGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCAAAAg > 1:1480553/1‑100 (MQ=255) ataaataGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGc < 2:2936524/100‑1 (MQ=255) ataGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGt > 2:3033516/1‑100 (MQ=255) ccgatctgtAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGttt < 2:2057657/94‑1 (MQ=255) aGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGttt < 1:1625487/100‑1 (MQ=255) aaaGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTT‑TTTTTATTGCGCTATCGAAAGCTTAtttt > 1:2552850/1‑99 (MQ=255) aaGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTGCTTCTTTTTTTT‑TTTTTTTAACGCTATCGAAAGCTTTTTTTa > 1:1960116/1‑99 (MQ=255) aGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACa > 2:1109015/1‑100 (MQ=255) gtgtAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACAt > 2:2952213/1‑100 (MQ=255) gtgtAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACAt > 2:1839733/1‑100 (MQ=255) gtAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGtttagatcgg > 1:2057649/1‑93 (MQ=255) gtAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCt < 1:446288/100‑1 (MQ=255) tAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCtt > 1:1735448/1‑100 (MQ=255) aGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTc < 1:1262821/100‑1 (MQ=255) gATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCa < 2:395980/100‑1 (MQ=255) gATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCa > 1:1227233/1‑100 (MQ=255) aTTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCAttttt > 1:327895/1‑100 (MQ=255) aTTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCAttttt < 2:1553266/100‑1 (MQ=255) aTTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCAttttt < 2:1780508/100‑1 (MQ=255) aTTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCAttttt < 1:2250347/100‑1 (MQ=255) ttAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCAtttttt < 1:1097358/100‑1 (MQ=255) aGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTaa > 2:2579383/1‑100 (MQ=255) aGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTaa > 2:2705844/1‑100 (MQ=255) ggCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTaaa > 2:1175173/1‑100 (MQ=255) ggCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTaaa < 2:1051910/100‑1 (MQ=255) gcgcAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTaaa < 1:770092/99‑1 (MQ=255) gcgcAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAg < 2:948688/100‑1 (MQ=255) ctcAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTaa < 1:1497327/95‑1 (MQ=255) cgcAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAg > 1:2428201/1‑100 (MQ=255) cgcAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGa > 1:1110136/1‑100 (MQ=255) gcAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGAc < 1:2324517/100‑1 (MQ=255) aGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCa < 1:1109011/100‑1 (MQ=255) tatttattCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCAt < 1:531089/98‑1 (MQ=255) tATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCAtt > 1:1080292/1‑99 (MQ=255) tATTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTg < 1:1175169/100‑1 (MQ=255) aTTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGa < 2:1886892/100‑1 (MQ=255) aTTTAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGa < 2:1966992/100‑1 (MQ=255) ttAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGAtt < 2:63832/100‑1 (MQ=255) ttAGTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGAtt < 2:2792445/100‑1 (MQ=255) aGTCTATATGGCAAGTAGTAATTATTTACTCC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTa > 1:1266102/1‑100 (MQ=255) gTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTaa > 2:2680866/1‑100 (MQ=255) gTCTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTaa < 1:2117028/100‑1 (MQ=255) tCTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTT‑TATGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTaaa > 1:2239442/1‑100 (MQ=255) cTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTT‑TTTTTTTTGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTaa > 1:2458332/1‑98 (MQ=255) cTATATGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTaaaa > 1:1821354/1‑100 (MQ=255) tataTGGTAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAAt > 2:1452883/1‑100 (MQ=255) tataTGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAAt < 1:2579369/100‑1 (MQ=255) tataTGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAAt < 1:829081/100‑1 (MQ=255) atatGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATa < 2:1227237/100‑1 (MQ=255) atGGCAAGTAGTAATTATTTACTTCTTTTTTTT‑TTTTTTTTTCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGt > 1:1413666/1‑100 (MQ=255) atGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGt > 2:2675191/1‑100 (MQ=255) tGGCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTa > 1:696227/1‑100 (MQ=255) gCAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTa < 2:2053087/98‑1 (MQ=255) cAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCa > 1:446746/1‑100 (MQ=255) cAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCa < 2:3060912/100‑1 (MQ=255) cAAGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCa > 1:2779915/1‑100 (MQ=255) aaGTAGTAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCaa < 2:2235001/100‑1 (MQ=255) agtagtAATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAAc < 2:261247/100‑1 (MQ=255) gtagtaATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAAcc < 1:162490/100‑1 (MQ=255) gtagtaATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAAcc < 1:2680850/100‑1 (MQ=255) gtagtaATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAAcc < 2:749589/100‑1 (MQ=255) tagtaATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCa > 1:530464/1‑100 (MQ=255) taATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAg < 1:2666487/100‑1 (MQ=255) taATTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAg < 2:1682722/100‑1 (MQ=255) aaTTATTTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGc > 2:1687099/1‑100 (MQ=255) attattTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCa < 1:2138926/100‑1 (MQ=255) attattTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCa < 2:1888534/100‑1 (MQ=255) attattTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCa < 2:490547/100‑1 (MQ=255) attattTACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCa > 1:3013379/1‑100 (MQ=255) ttACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCATCTTg > 1:941097/1‑100 (MQ=255) ttACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCATCTTg < 2:1990507/100‑1 (MQ=255) ttACTTC‑TTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCATCTTg < 1:3033497/100‑1 (MQ=255) | TGCTCCTTTTGCAACGTATCACTTGTCAATAAATAGAAAGTGTAGATGTATTAGGCGCAGCTATTTAGTCTATATGGCAAGTAGTAATTATTTACTTCTTTTTTTTCTACGAACAGCGCTATCGAAAGCTTGTTTTACATCTTCATTTTTTAAAGACCATTGATTTAAAATAGTATCAACCAAAGCATCTTG > NC_000913/2757557‑2757748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |