| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,207,942 | (G)7→8 | coding (442/630 nt) | stfP → | e14 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,207,935 | 1 | . | G | 93.1% | 500.7 / 32.0 | 145 | coding (435/630 nt) | stfP | e14 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (5/5); new base G (69/66); total (74/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
GGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATC > NC_000913/1207837‑1208028 | ggACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑g > 2:89700/1‑100 (MQ=255) gACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑gg < 2:322064/100‑1 (MQ=255) cGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑g > 2:1460535/1‑100 (MQ=255) cACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑gg‑g > 2:1811989/1‑100 (MQ=255) cACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑gg‑g < 1:948474/100‑1 (MQ=255) ggTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑gg‑gggat > 1:86030/1‑97 (MQ=255) gTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑gg‑gggatg < 1:403662/100‑5 (MQ=255) tttCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑gg‑gggatgg > 1:1273145/1‑95 (MQ=255) tttCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑ggg‑gg‑gggatgg < 1:1990174/100‑6 (MQ=255) ttCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGa > 2:2288148/1‑100 (MQ=255) gatctgCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaa < 2:1492290/95‑1 (MQ=255) cATAGGTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa < 2:634296/100‑1 (MQ=255) cATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa > 2:129241/1‑100 (MQ=255) cATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa > 1:1719738/1‑100 (MQ=255) cATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa > 1:2867206/1‑100 (MQ=255) cATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa > 1:784856/1‑100 (MQ=255) cATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa > 1:118227/1‑100 (MQ=255) cATAGCTATACCGGTCATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaa < 2:3021426/100‑1 (MQ=255) aTAGCTATACCGGTTATGATTGGTGTTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAAt < 2:1087143/100‑1 (MQ=255) tAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAGGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATa < 1:470712/100‑1 (MQ=255) aGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATAc < 1:281359/100‑1 (MQ=255) aGCTATACCGGTTATGATTGGTGGTAGTGAGCAAGCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaa < 1:549386/96‑1 (MQ=255) gCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTCATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACa > 1:1890084/1‑100 (MQ=255) gCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGaaagatc > 1:1492285/1‑96 (MQ=255) ataCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATTGGAATACaag > 1:2920063/1‑97 (MQ=255) taCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTg > 1:2222896/1‑100 (MQ=255) taCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTg < 2:2722586/100‑1 (MQ=255) aCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGt > 2:82221/1‑100 (MQ=255) aCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGt < 2:326075/100‑1 (MQ=255) ccGGTGTTGATGGGTGTTATTGCGCATTCAGTAATAATTCGGTGGGGGTGGAAGCCCGCAAAAGCACGTGCCTC‑GG‑GGG‑GG‑GG‑ATGGAAATACAGTTg < 2:1890090/98‑1 (MQ=255) gTTATGATTGGTGGTATTGATCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTc > 1:1878030/1‑100 (MQ=255) gTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTcc > 2:33352/1‑100 (MQ=255) ttATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTcc > 1:1290968/1‑100 (MQ=255) gATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGtt > 2:1454432/1‑100 (MQ=255) aTTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGtt > 2:2414574/1‑100 (MQ=255) ggtggtATTGAGCAATCAGTAATCATTCAGGGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCg < 2:522577/100‑1 (MQ=255) gatgatATTGAGCAATCAACAATCATTCAGTGGGGGGGGAATGCCATAAAAGCATCTGCCGC‑T‑‑GGGAGG‑AG‑AAGGAAATACAGTTGTATTCCCGGTTGc < 1:1334448/94‑1 (MQ=255) gtggtATCGAGTAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGt > 1:1607228/1‑100 (MQ=255) tggtATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGtt > 1:2571131/1‑100 (MQ=255) gtATTGAGCAATCAGTAATCATTCAGTGGGGGGGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTta < 2:963691/100‑1 (MQ=255) tATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaa > 1:1773738/1‑100 (MQ=255) tATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaa > 2:883810/1‑100 (MQ=255) aTTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaat > 1:485699/1‑100 (MQ=255) aTTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaat > 2:566011/1‑100 (MQ=255) aTTGAGCAATCAGTAATCATGCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑GG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaat < 2:1997550/100‑1 (MQ=255) ttGAGCAATGAGTAATCATTCAGTGGGGGTAGAAAGCCGCAAAAGCATCTACCTC‑T‑‑GGG‑GGTGA‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaat < 1:696149/99‑1 (MQ=255) tGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaataa > 1:2479300/1‑100 (MQ=255) tGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTtaataa < 1:1735822/100‑1 (MQ=255) gAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTaataat > 2:647268/1‑100 (MQ=255) aGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATg < 2:2479314/100‑1 (MQ=255) gCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGc > 1:1455468/1‑100 (MQ=255) gCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCACGGTTGCGTTTAATAATGc > 2:784696/1‑100 (MQ=255) cAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGcc > 1:2944280/1‑100 (MQ=255) cAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGcc < 2:631961/100‑1 (MQ=255) cAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGcc < 2:1719745/100‑1 (MQ=255) cAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGcc < 1:883807/100‑1 (MQ=255) aagaGTAATCATTCAGTGGGGGGTGAATGCCGCAAAAGCATCTGCCTG‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTAGTCCCGGTTGCGTTTAATAATGcc < 1:2040666/95‑1 (MQ=255) cAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTgtgt > 2:1924236/1‑100 (MQ=255) aGTAATGATTCAGTGGGGGTAGAATGCCGCAAAAGCATCTGCTTT‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTgtgt < 2:2793914/100‑1 (MQ=255) aGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TGGGGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCtgtg > 1:905712/1‑100 (MQ=255) aGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCtgtg < 2:2576346/99‑1 (MQ=255) aGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCtgtg < 2:1282096/99‑1 (MQ=255) aGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCtgtct < 2:2079315/100‑3 (MQ=255) aGTAATCATTCAGTGGGGGGGGAATGCCGCAAAAGCATCTGCCTG‑T‑‑GGG‑GG‑GGAATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCtgtg < 1:1432339/99‑1 (MQ=255) tAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGtt > 1:2639619/1‑99 (MQ=255) aaTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATCCAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGc > 1:2897794/1‑100 (MQ=255) aaTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTg < 1:647267/99‑1 (MQ=255) aaTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGc > 2:34917/1‑100 (MQ=255) aaTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGc < 2:1625086/100‑1 (MQ=255) aaTCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGcc < 1:33352/100‑1 (MQ=255) aTTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCgtt > 2:1756290/1‑100 (MQ=255) aTTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCgt < 2:1290972/99‑1 (MQ=255) ttCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCgttg > 2:1908133/1‑100 (MQ=255) cAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCgttgtt < 1:2288139/100‑1 (MQ=255) aGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGttgttg > 1:1255495/1‑100 (MQ=255) tGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCa > 2:2115426/1‑100 (MQ=255) ggggggggAATGCAGCAAAAGCATCGGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCgttg < 1:1334905/94‑1 (MQ=255) gggggTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCaa > 2:1086918/1‑100 (MQ=255) gTGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTa < 1:566009/100‑1 (MQ=255) tGGAATGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTAt < 2:1255499/100‑1 (MQ=255) ggAATGACGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATg < 1:128974/100‑1 (MQ=255) aaTGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGAc < 2:2898572/100‑1 (MQ=255) aaTGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGAc < 2:2421338/100‑1 (MQ=255) aaTGCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGAc < 1:854617/100‑1 (MQ=255) gCCGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAAt > 2:2696380/1‑100 (MQ=255) ccGCAAAAGCATCTGCCTC‑TGGGGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAAt < 2:2167932/100‑1 (MQ=255) ccGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATg > 1:261574/1‑100 (MQ=255) cGCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGt > 2:3014093/1‑100 (MQ=255) gCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGaagatcgg > 1:1929517/1‑93 (MQ=255) gCAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTc > 2:350641/1‑100 (MQ=255) cAAAAGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCa < 1:1040323/100‑1 (MQ=255) aaaaGCGTCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGGTGTTGCAAATTATGACAATGTCAg < 1:1253692/100‑1 (MQ=255) aaaaGCATCTGCCTCGG‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATg < 1:2030152/96‑1 (MQ=255) aaaaGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAg < 2:2807447/100‑1 (MQ=255) aaaaGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAg > 1:477239/1‑100 (MQ=255) aaaaGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAg < 2:1260947/100‑1 (MQ=255) aaaaGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAg > 2:1942064/1‑100 (MQ=255) aaGCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAgcg < 1:2988138/100‑1 (MQ=255) gCATCTGCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCa > 1:2231409/1‑100 (MQ=255) gCCTC‑TG‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATc > 2:465488/1‑100 (MQ=255) | GGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTC‑T‑‑GGG‑GG‑GG‑ATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATC > NC_000913/1207837‑1208028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |