BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	303617 =	154 (1.270)	6 (0.060)	5/172	14.1	4.0%	intergenic (+12/+236)	yagU/ykgJ	DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein
*	?	NC_000913	303650 =	153 (1.450)	6 (0.060)	5/172	14.1	4.0%	intergenic (+45/+203)	yagU/ykgJ	DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 156 total aligned reads displayed.

TGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGA  >  NC_000913/303519‑303716

tggtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGAt                                                                                                    >  2:2321628/1‑100 (MQ=255)

  gtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATaa                                                                                                  >  2:650064/1‑100 (MQ=255)

  gtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATaa                                                                                                  <  2:1594782/100‑1 (MQ=255)

   tCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGACTGATaaa                                                                                                 >  1:1931868/1‑100 (MQ=255)

     tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATaaaaa                                                                                               >  2:714658/1‑100 (MQ=255)

     tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATaaaaa                                                                                               >  1:2932612/1‑100 (MQ=255)

      aTTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAAt                                                                                              <  1:2365882/100‑1 (MQ=255)

      aTTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAAt                                                                                              >  1:695420/1‑100 (MQ=255)

         gAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGgc                                                                                           <  1:1375198/100‑1 (MQ=255)

         gAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGgc                                                                                           >  2:2902793/1‑100 (MQ=255)

         gAAATTATTCGCAGAGATTTACGAAACAGAATGACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGgc                                                                                           >  2:2906067/1‑100 (MQ=255)

           aaTTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGgcgn                                                                                         <  2:1560499/100‑2 (MQ=255)

            attattCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCa                                                                                        <  2:880650/100‑1 (MQ=255)

              tattCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCaaa                                                                                      >  1:2539240/1‑100 (MQ=255)

               attCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAAt                                                                                     <  2:2844496/100‑1 (MQ=255)

                  cGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACa                                                                                  <  2:364588/100‑1 (MQ=255)

                  cGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACa                                                                                  <  1:2312591/100‑1 (MQ=255)

                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                >  2:2345094/1‑100 (MQ=255)

                    cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                <  1:2357281/100‑1 (MQ=255)

                            tACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCTCTTTAGGCTCAAACAGATACTGCATTGAATGATAAAAATGGCGCAAATACAGCGCCAtttt                                                                        <  1:1672379/100‑1 (MQ=255)

                              ctaaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTta                                                                      >  2:2068989/3‑100 (MQ=255)

                              cGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTta                                                                      >  1:1893391/1‑100 (MQ=255)

                               gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtat                                                                     >  2:447824/1‑100 (MQ=255)

                                aaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                    >  2:2721198/1‑100 (MQ=255)

                                aaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                    >  1:1751598/1‑100 (MQ=255)

                                aaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                    >  1:2261566/1‑100 (MQ=255)

                                 aaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAg                                                                   <  1:1250687/100‑1 (MQ=255)

                                   cAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGt                                                                 >  2:2350850/1‑100 (MQ=255)

                                   cAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGt                                                                 >  1:375752/1‑100 (MQ=255)

                                     gAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTa                                                               >  2:387206/1‑100 (MQ=255)

                                     cgatctcTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTa                                                               <  2:675665/94‑1 (MQ=255)

                                           cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTaagatcg                                                         >  1:675664/1‑95 (MQ=255)

                                           cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACa                                                         >  1:2512467/1‑100 (MQ=255)

                                           cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACa                                                         >  2:1439798/1‑100 (MQ=255)

                                              aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                      <  2:27084/100‑1 (MQ=255)

                                              aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                      <  1:2211697/100‑1 (MQ=255)

                                                 aGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGTTTAAAAACATTGCtt                                                   >  1:1828863/1‑100 (MQ=255)

                                                 aGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCtt                                                   >  1:73041/1‑100 (MQ=255)

                                                  gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                  >  2:3008382/1‑100 (MQ=255)

                                                  gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATAGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                  >  1:1955083/1‑100 (MQ=255)

                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt                                                <  1:2072285/100‑1 (MQ=255)

                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt                                                <  2:2041138/100‑1 (MQ=255)

                                                    cAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt                                                >  2:572979/1‑100 (MQ=255)

                                                     aGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTta                                               >  1:1225361/1‑100 (MQ=255)

                                                     aGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTta                                               <  2:1295807/100‑1 (MQ=255)

                                                      gtcccTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTtat                                              <  1:1025933/98‑1 (MQ=255)

                                                      gACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTta                                               <  2:2984797/99‑1 (MQ=255)

                                                       aCCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTtata                                             >  2:2550472/1‑100 (MQ=255)

                                                         ccTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATAtt                                           >  1:2170974/1‑100 (MQ=255)

                                                          cTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTc                                          <  2:2859078/100‑1 (MQ=255)

                                                          cTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTc                                          >  1:1000828/1‑100 (MQ=255)

                                                           tGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTc                                          <  1:55294/99‑1 (MQ=255)

                                                           tGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCt                                         <  2:1691890/100‑1 (MQ=255)

                                                              gaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGa                                       <  2:1925159/99‑1 (MQ=255)

                                                              gaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAt                                      >  1:647279/1‑100 (MQ=255)

                                                              gaTCCCTTTAGGCTCAAACAGATAATGCATTGAATAATAAAAATGGCGGAAATACAGAGTCATTTTTATAGGTTAAAAACATTGCTTTTTatat                                            <  1:472918/94‑1 (MQ=255)

                                                               aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                     >  1:1596643/1‑100 (MQ=255)

                                                               aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                     >  2:264160/1‑100 (MQ=255)

                                                               aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                     >  1:1775186/1‑100 (MQ=255)

                                                               aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCAGTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                     <  1:1890038/100‑1 (MQ=255)

                                                                tCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGaaga                                    >  2:154838/1‑97 (MQ=255)

                                                                tCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGc                                    <  1:1101630/100‑1 (MQ=255)

                                                                 cccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCa                                   <  2:2180852/100‑1 (MQ=255)

                                                                 cccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCa                                   <  2:1000832/100‑1 (MQ=255)

                                                                  ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAg                                  >  2:1983561/1‑100 (MQ=255)

                                                                  ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAg                                  >  1:2847902/1‑100 (MQ=255)

                                                                  ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAg                                  <  1:2321619/100‑1 (MQ=255)

                                                                   cTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGa                                 <  2:1040125/100‑1 (MQ=255)

                                                                    tttAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGAt                                >  1:115163/1‑100 (MQ=255)

                                                                       aGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAg                              <  1:3008363/99‑1 (MQ=255)

                                                                       aGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGt                             >  2:2528553/1‑100 (MQ=255)

                                                                        ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                            <  1:506798/100‑1 (MQ=255)

                                                                        ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                            <  2:1045159/100‑1 (MQ=255)

                                                                        ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                            >  1:1489628/1‑100 (MQ=255)

                                                                         gCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGagatcgg                           >  1:2710081/1‑94 (MQ=255)

                                                                          cTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAg                          >  2:698080/1‑100 (MQ=255)

                                                                            cAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                        <  1:2112249/100‑1 (MQ=255)

                                                                            cAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                        <  2:1751605/100‑1 (MQ=255)

                                                                            cAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                        >  2:1655445/1‑100 (MQ=255)

                                                                             aaaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                        <  1:2926073/99‑1 (MQ=255)

                                                                              aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAg                      >  2:681396/1‑100 (MQ=255)

                                                                              aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAg                      <  2:1201102/100‑1 (MQ=255)

                                                                               aCAGATAATGCATTGAATGATAAAAATGGCGCAAACACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt                     <  1:39494/100‑1 (MQ=255)

                                                                                cAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta                    <  1:2800474/100‑1 (MQ=255)

                                                                                cAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta                    <  1:2902775/100‑1 (MQ=255)

                                                                                cAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta                    <  1:2906049/100‑1 (MQ=255)

                                                                                cAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGta                    <  1:2424619/100‑1 (MQ=255)

                                                                                 aGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtat                   >  1:436255/1‑100 (MQ=255)

                                                                                  gATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtata                  >  2:1234154/1‑100 (MQ=255)

                                                                                  gATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtata                  >  1:1651034/1‑100 (MQ=255)

                                                                                    tAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATc                >  1:171083/1‑100 (MQ=255)

                                                                                     aaTGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcg               >  1:2569582/1‑100 (MQ=255)

                                                                                       tGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcgcg             >  2:1397327/1‑100 (MQ=255)

                                                                                        gCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCgcgc            <  2:1743987/100‑1 (MQ=255)

                                                                                        gCATTGAATGATAAAAAAGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCgcgc            <  1:464436/100‑1 (MQ=255)

                                                                                             gAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACtt       >  1:813181/1‑100 (MQ=255)

                                                                                              aaTGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTc      >  1:314311/1‑100 (MQ=255)

                                                                                                 gATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAgg   <  1:750372/100‑1 (MQ=255)

                                                                                                 gATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAgg   <  1:1949862/100‑1 (MQ=255)

                                                                                                  aTAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGga  >  2:2309739/1‑100 (MQ=255)

TGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGA  >  NC_000913/303519‑303716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.