New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 147909 =126 (1.040)5 (0.050) 5/178 14.4 4.3% intergenic (+39/+35) yadD/panC transposase_31 family protein/pantothenate synthetase
?NC_000913 147940 = 108 (0.990)intergenic (+70/+4) yadD/panC transposase_31 family protein/pantothenate synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 126 total aligned reads displayed.

GAGATTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGAAACT  >  NC_000913/147841‑148037
                                                                                                   |                                                                                                 
gagaTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTaa                                                                                                   >  1:1721430/1‑100 (MQ=255)
gagaTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTaa                                                                                                   >  2:1160079/1‑100 (MQ=255)
 agaTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAg                                                                                                  <  1:498717/100‑1 (MQ=255)
 agaTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAg                                                                                                  <  2:2506373/100‑1 (MQ=255)
  gaTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGt                                                                                                 >  2:202760/1‑100 (MQ=255)
  gaTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTAAGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGt                                                                                                 >  1:1678789/1‑100 (MQ=255)
   aTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTa                                                                                                >  1:2523575/1‑100 (MQ=255)
   aTTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTa                                                                                                <  1:1659097/100‑1 (MQ=255)
     tGAAAAGTTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTa                                                                                                <  2:60432/98‑1 (MQ=255)
      gATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTa                                                                                             >  2:1813195/1‑100 (MQ=255)
      gATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTa                                                                                             <  2:275533/100‑1 (MQ=255)
      gATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTAGGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTa                                                                                             >  1:1637282/1‑100 (MQ=255)
        tAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTAc                                                                                            >  1:2526728/1‑99 (MQ=255)
         aaGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAgatcggaag                                                                                          >  2:688130/1‑92 (MQ=255)
         aaGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGc                                                                                          >  1:1190113/1‑100 (MQ=255)
         aaGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGc                                                                                          >  1:1283203/1‑100 (MQ=255)
          aGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGcc                                                                                         >  1:2798354/1‑100 (MQ=255)
           ggTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCa                                                                                        >  1:2624603/1‑100 (MQ=255)
           ggTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCa                                                                                        >  1:1184842/1‑100 (MQ=255)
             tAAGTAACCTTATTTAAGTTAACTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGc                                                                                      <  1:1994135/100‑1 (MQ=255)
              aaTTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCt                                                                                     >  1:1399837/1‑100 (MQ=255)
               aTTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTc                                                                                    <  1:307256/100‑1 (MQ=255)
                    ccTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCa                                                                               >  1:2622509/1‑100 (MQ=255)
                    ccTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCa                                                                               >  2:1140554/1‑100 (MQ=255)
                      ttATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCAtt                                                                             <  2:1283207/100‑1 (MQ=255)
                       tATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCAttt                                                                            <  2:921556/100‑1 (MQ=255)
                       tATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCAttt                                                                            <  2:1839762/100‑1 (MQ=255)
                        aTTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCAtttt                                                                           <  1:2124181/100‑1 (MQ=255)
                         tttAAGTTAACTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTttg                                                                          >  1:753212/1‑100 (MQ=255)
                          ttAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTttgt                                                                         <  2:1165853/100‑1 (MQ=255)
                          ttAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTttgt                                                                         <  2:187320/100‑1 (MQ=255)
                           tAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTttgtt                                                                        >  1:76571/1‑100 (MQ=255)
                            aaGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTttgttg                                                                       >  1:2442791/1‑100 (MQ=255)
                            aaGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTttgttg                                                                       <  1:953936/100‑1 (MQ=255)
                             aGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTtgttgt                                                                      <  1:312537/100‑1 (MQ=255)
                              gTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTc                                                                     <  2:1710883/100‑1 (MQ=255)
                               ttACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCg                                                                    <  1:1812371/100‑1 (MQ=255)
                               ntACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCg                                                                    >  1:1731951/2‑100 (MQ=255)
                                 aCCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGAt                                                                  <  1:2825223/100‑1 (MQ=255)
                                  ccTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTACGTATTACGCCAGCTCGACCATTTTGTTGTCGATc                                                                 >  2:453935/1‑100 (MQ=255)
                                  ccTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATc                                                                 <  2:1043708/100‑1 (MQ=255)
                                  ccTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATc                                                                 <  1:1160075/100‑1 (MQ=255)
                                   cTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCa                                                                <  2:2275508/100‑1 (MQ=255)
                                   cTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCa                                                                >  2:257645/1‑100 (MQ=255)
                                    tgtgTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAg                                                               <  2:1300630/100‑1 (MQ=255)
                                     gtgtTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAgg                                                              >  2:446045/1‑100 (MQ=255)
                                      tgtTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGc                                                             <  2:76571/100‑1 (MQ=255)
                                       gtTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCg                                                            <  2:1678796/100‑1 (MQ=255)
                                       gtTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCg                                                            <  2:516714/100‑1 (MQ=255)
                                         tATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAg                                                          >  1:1745665/1‑100 (MQ=255)
                                         tATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAg                                                          <  2:2442804/100‑1 (MQ=255)
                                           tGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCa                                                        <  2:2476519/100‑1 (MQ=255)
                                           tGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCa                                                        <  2:1399842/100‑1 (MQ=255)
                                           tGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCa                                                        >  1:85163/1‑100 (MQ=255)
                                            gACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCAt                                                       >  1:2247272/1‑100 (MQ=255)
                                            gACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCAt                                                       >  1:1623545/1‑100 (MQ=255)
                                              cAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTGGATCAGGCGAGCATCg                                                     >  1:1796463/1‑100 (MQ=255)
                                              cAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCg                                                     >  2:2659088/1‑100 (MQ=255)
                                              cAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCg                                                     <  2:2435919/100‑1 (MQ=255)
                                              cAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCg                                                     >  2:2183957/1‑100 (MQ=255)
                                              cAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCg                                                     >  1:761902/1‑100 (MQ=255)
                                               aGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGc                                                    >  1:778396/1‑100 (MQ=255)
                                                gATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGcc                                                   >  1:90012/1‑100 (MQ=255)
                                                gATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGcc                                                   <  2:1583807/100‑1 (MQ=255)
                                                    aCGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGc                                               <  1:2183947/100‑1 (MQ=255)
                                                        ggggTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAgg                                           >  2:2715439/1‑100 (MQ=255)
                                                         gggTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAggc                                          <  2:2716230/100‑1 (MQ=255)
                                                          ggTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAggcg                                         <  2:785293/100‑1 (MQ=255)
                                                             aaaTTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCt                                      >  2:477416/1‑100 (MQ=255)
                                                                 taataaCTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTAcga                                  >  2:1586725/1‑98 (MQ=255)
                                                                  aataaCTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAg                                 >  2:673338/1‑100 (MQ=255)
                                                                    taaCTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGaa                               >  2:1431143/1‑100 (MQ=255)
                                                                    taaCTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGaa                               <  1:1661958/100‑1 (MQ=255)
                                                                       cTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCGGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTa                            <  2:2164764/100‑1 (MQ=255)
                                                                        tGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTAc                           <  2:2696134/100‑1 (MQ=255)
                                                                          gcgcCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTg                         <  2:761904/100‑1 (MQ=255)
                                                                          gcgcCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTg                         >  1:1697246/1‑100 (MQ=255)
                                                                           cgcCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGc                        <  1:202760/100‑1 (MQ=255)
                                                                            gcCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGcc                       >  1:231723/1‑100 (MQ=255)
                                                                            gcCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGcc                       >  1:2352871/1‑100 (MQ=255)
                                                                                 cAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGttt                  >  2:1607208/1‑100 (MQ=255)
                                                                                 cAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCAACGCCAGGCCAGGCGGCTACCAGAATTACTGCCCGttt                  >  1:2061296/1‑100 (MQ=255)
                                                                                  aGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTg                 >  2:1672239/1‑100 (MQ=255)
                                                                                   gCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGc                >  2:2330209/1‑100 (MQ=255)
                                                                                    ccGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCt               >  1:2042446/1‑100 (MQ=255)
                                                                                     cGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTg              >  2:743681/1‑100 (MQ=255)
                                                                                          cgcCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTc         <  1:1140550/100‑1 (MQ=255)
                                                                                          cgcCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTc         >  1:2472919/1‑100 (MQ=255)
                                                                                           gcCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCa        <  2:91582/100‑1 (MQ=255)
                                                                                            ccAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAg       <  2:1122112/100‑1 (MQ=255)
                                                                                             cAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGa      >  1:96570/1‑100 (MQ=255)
                                                                                             cAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGa      >  1:1656009/1‑100 (MQ=255)
                                                                                             cAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGa      >  2:2451663/1‑100 (MQ=255)
                                                                                             cAGTCAAGTATTACGCTAGCTCGACCATTGTGTTCTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAg       <  1:2646585/99‑1 (MQ=255)
                                                                                              aGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGaa     <  2:451674/100‑1 (MQ=255)
                                                                                              aGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGaa     <  1:910534/100‑1 (MQ=255)
                                                                                              aGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGaa     <  2:1623552/100‑1 (MQ=255)
                                                                                               gTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGaaa    <  2:1697253/100‑1 (MQ=255)
                                                                                                 tAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGAAACt  <  1:2659073/100‑1 (MQ=255)
                                                                                                 tAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGAAACt  >  2:882898/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
GAGATTGATAAGGTAATTAACCTTATTTAAGTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCCAGCTCGACCATTTTGTTGTCGATCAGGCGAGCATCGCCAAGCCAGGCGGCTACCAGAATTACTGCCCGTTTGCTGGTTTCAGAAACT  >  NC_000913/147841‑148037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.