New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2950597 | NA (NA) | 5 (0.050) | 5/158 | NT | NA | intergenic (+24/+38) | argA/recD | amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain |
? | NC_000913 | = 2950614 | NA (NA) | noncoding (2/14 nt) | REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences |
GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2950490‑2950597 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcgacGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTTT < NC_000913/2950614‑2950516 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG < 2:193523/100‑1 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG > 1:713646/1‑100 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG < 1:183669/100‑1 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG < 1:1837977/100‑1 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG < 1:2264587/100‑1 ATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGG > 2:2536246/1‑100 TATTGATTTACTGACCGAGAGCAAAAAGCAGTTGTACACCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG > 1:2065937/1‑98 ATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGCTTTAGGGTAAGCGATGAAAATCGTCGGAT > 1:2609847/1‑100 ATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGAT < 1:1376608/100‑1 TGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGC > 1:3099891/1‑100 TGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGC < 1:2503504/100‑1 TGATTTACTGCCAGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGC < 1:2463494/100‑1 GATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCn < 1:2453924/100‑2 GATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCG < 1:418941/100‑1 GATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCG < 1:606506/100‑1 GATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCG < 2:631798/100‑1 ATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTAGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGA > 2:2454789/1‑100 cttccgatctGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC < 2:1774242/90‑1 TTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC < 1:1635126/100‑1 TTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC < 2:1523853/100‑1 AGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCA < 1:408744/100‑1 TTGTACAACTACTAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATC < 1:3163900/100‑1 TGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCC < 1:2164233/100‑1 ACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGAC < 2:2824467/100‑1 CAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACG < 2:3268745/100‑1 CGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTAC < 1:868210/100‑1 CGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTAC < 1:1482102/100‑1 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACA < 1:1411712/100‑1 nTGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAAC > 1:774895/2‑100 ctCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACT < 1:921858/98‑1 TGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACT < 1:3085170/100‑1 TGCGACGCACGAGTGTTACGCATGTCGCATCCGGCGATTTTCATCGCTTACCCCAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACT > 1:728202/1‑100 CGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTag > 2:921861/1‑98 CGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGC > 2:1785978/1‑100 CGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGC < 1:446659/100‑1 ACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCTCTTACCCCACATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTT < 1:1034691/100‑1 ACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTT < 1:1767936/100‑1 CGTACGAGTGTTACGCATGTCGCAACCGACGATTTTCATCGCTTACCCTAAATACGCCATCAACACTTTGGATTTACGCTGGTAGTTTTACAACTGCTTT > 1:1355164/1‑100 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2950490‑2950597 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcgacGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTTT < NC_000913/2950614‑2950516 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |