| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3423804 | 0 (0.000) | 33 (0.290) | 7/166 | NT | 100% | intergenic (‑17/+76) | rrfD/rrlD | 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 4040488 = | NA (NA) | intergenic (+65/‑29) | rrlA/rrfA | 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon | |||||
CACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT > NC_000913/3423705‑3423902 | cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 2:12588‑M1/1‑100 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 2:1785994‑M1/1‑100 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 2:2662284‑M1/1‑100 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA < 1:1739873‑M1/100‑1 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 2:1695184‑M1/1‑100 (MQ=255)cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA < 2:911418‑M1/100‑1 (MQ=255) gcTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCTCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtct < 2:845001‑M1/100‑16 (MQ=255) cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 1:1302104‑M1/100‑20 (MQ=255) ggCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgatga < 2:2263531‑M1/100‑21 (MQ=255) ggCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataa < 2:2392776‑M1/100‑21 (MQ=255) ggCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataa < 2:928582‑M1/100‑21 (MQ=255) ggCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataa < 2:466045‑M1/100‑21 (MQ=255) ggCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataa < 2:1487867‑M1/100‑21 (MQ=255) gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaa < 2:396495‑M1/100‑22 (MQ=255) cGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaa < 2:1585566‑M1/100‑23 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCTCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:2136713‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:1630829‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:243098‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:570691‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:38996‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:798470‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:1666802‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:2359423‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:798422‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 2:1703975‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 2:1970295‑M1/100‑24 (MQ=255) gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 2:2991319‑M1/100‑24 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 2:507331‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:1388331‑M1/100‑25 (MQ=255) tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaaca < 2:885223‑M1/100‑25 (MQ=255) tttCACTTCTGAGTGCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:543235‑M1/100‑25 (MQ=255) ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 2:2074686‑M1/100‑26 (MQ=255) ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaacag < 2:190092‑M1/100‑26 (MQ=255) tCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:2120184‑M1/99‑26 (MQ=255) tCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacaga < 2:1695570‑M1/100‑27 (MQ=255) aCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaat < 2:2833796‑M1/100‑29 (MQ=255) aCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaat < 2:2433238‑M1/100‑29 (MQ=255) tCTGAGTTCGGCATGGGGTCAGGTGGGACCACCCCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:2680098‑M1/93‑25 (MQ=255) ttCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaatttgcctggc < 1:512806‑M1/100‑38 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt < 1:1026724‑M1/100‑95 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt > 2:932357‑M1/1‑6 (MQ=255) aTCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgt < 2:2384407‑M1/100‑95 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta > 2:2477430‑M1/1‑5 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta > 1:268025‑M1/1‑5 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta < 2:2935925‑M1/100‑96 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta > 1:920483‑M1/1‑5 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta < 2:1696316‑M1/100‑96 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta > 2:3328168‑M1/1‑5 (MQ=255) tCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgta > 2:1774851‑M1/1‑5 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag > 1:1200376‑M1/1‑4 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag < 1:1764050‑M1/100‑97 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag > 2:1998550‑M1/1‑4 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag < 2:2726901‑M1/100‑97 (MQ=255) cAGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtagtcccacctgaccccatgccgaactcagaagtgaaacgccgtag < 2:1836892‑M1/100‑97 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaccgccgtagc > 2:3025819‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 2:789489‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc < 1:830673‑M1/100‑98 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 1:561845‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 1:2772171‑M1/1‑3 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc < 1:2270766‑M1/100‑98 (MQ=255) aGAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc < 2:2713554‑M1/100‑98 (MQ=255) gAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcg < 2:480976‑M1/100‑99 (MQ=255) gAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcg > 2:1642561‑M1/1‑2 (MQ=255) gAacgcagaagcggtctgataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcg > 2:517974‑M1/1‑2 (MQ=255) | CACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATT > NC_000913/3423705‑3423902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |