New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4611642118 (0.950)5 (0.040) 4/166 NT 4.4% coding (247/606 nt) osmY salt‑inducible putative ABC transporter periplasmic binding protein
?NC_000913 = 4611664 105 (0.910)coding (269/606 nt) osmY salt‑inducible putative ABC transporter periplasmic binding protein
Rejected: Frequency below cutoff threshold.

Only 100 of 151 total aligned reads displayed.

TCGGTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTCA  >  NC_000913/4611544‑4611741
                                                                                                  |                                                                                                   
tCGGTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGa                                                                                                    <  1:194054/100‑1 (MQ=255)
  ggTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATc                                                                                                  <  1:329529/100‑1 (MQ=255)
  ggTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATc                                                                                                  <  2:2449674/100‑1 (MQ=255)
  ggTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATc                                                                                                  <  1:1817363/100‑1 (MQ=255)
  ggTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATc                                                                                                  <  2:606865/100‑1 (MQ=255)
   gTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCa                                                                                                 <  1:1327241/100‑1 (MQ=255)
    tAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCaa                                                                                                >  1:200465/1‑100 (MQ=255)
     aaTTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCaaa                                                                                               <  2:3165673/100‑1 (MQ=255)
      aTTTCATGGATGACAGCGCCATCACCGCGAGAGGGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAGCCGATCaaaa                                                                                              >  1:2196986/1‑100 (MQ=255)
        ttCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAg                                                                                            <  2:1685009/100‑1 (MQ=255)
           aTGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCg                                                                                         <  1:2200170/100‑1 (MQ=255)
            tGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCagatcggaag                                                                                        >  2:2664462/1‑91 (MQ=255)
            tGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGt                                                                                        <  2:805427/100‑1 (MQ=255)
             ggATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTg                                                                                       <  2:318310/100‑1 (MQ=255)
             ggATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTg                                                                                       <  2:1465401/100‑1 (MQ=255)
               aTGACAGCGCCATCACCGCGAAAGAGCAGCCGGCACCGCCGCACCATGACAACAGCAAGAGCACGCACATCTCTGTCAAACCCCAACAACAAgcacacac                                                                                     >  1:2694939/1‑93 (MQ=255)
                tGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGAcc                                                                                    >  2:820771/1‑100 (MQ=255)
                tGACAGCGCCATCACCACGAACGTAAAGGCGGCGCGGGGGGAACCAGACAACAAGCGGAGAACTCACAGCGGTGTACGAACCGATCAAAAAGACGTGAcc                                                                                    >  1:2849574/1‑100 (MQ=255)
                 gACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGAccc                                                                                   >  2:3240168/1‑100 (MQ=255)
                 gACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTAGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGAccc                                                                                   >  1:2517359/1‑100 (MQ=255)
                   cAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTg                                                                                 >  2:952160/1‑100 (MQ=255)
                     gcgcCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAg                                                                               >  1:2797319/1‑100 (MQ=255)
                      cgcCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAAAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAg                                                                               >  1:3131869/1‑99 (MQ=255)
                       gcCATCACCGCGAAAGTGAAGGCGGCCCCGGCGGATCATGCCAACATCAAGAGCACCGCTATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGCGcg                                                                             <  1:1321433‑M2/100‑3 (MQ=255)
                            cACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGCTATCTCTGTAAAAACCGACCAAAAAGCCGTGACCCTGAGCGGTTTc                                                                        >  1:600772/1‑100 (MQ=255)
                            cACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTc                                                                        >  1:1091863/1‑100 (MQ=255)
                             aCCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCg                                                                       >  2:23336/1‑100 (MQ=255)
                              ccGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCgc                                                                      >  1:2418969/1‑99 (MQ=255)
                              ccGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGt                                                                      <  1:1018335/100‑1 (MQ=255)
                              ccGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGt                                                                      <  1:2271340/100‑1 (MQ=255)
                              ccGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGt                                                                      >  1:2444188/1‑100 (MQ=255)
                               cgcgAAAGTGAAGGCGGCCGTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTGGTGACACTGAGCGGTTTCGtt                                                                     >  1:3099416/1‑100 (MQ=255)
                               cgcgAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGctcagggtcacgactttttgatcggtttttac                                                                     <  1:1850604‑M1/100‑33 (MQ=255)
                               cgcgAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGtt                                                                     <  2:645176/100‑1 (MQ=255)
                               cgcgAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGtt                                                                     <  1:1649093/100‑1 (MQ=255)
                                 cgAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGctcagggtcacgactttttgatcggtttttacag                                                                   <  1:2091461‑M1/100‑35 (MQ=255)
                                 cgAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGa                                                                   <  2:899303/100‑1 (MQ=255)
                                       tGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGcca                                                             <  2:1561601/100‑1 (MQ=255)
                                       tGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGGGACCCTGAGCGGTGTCGTTGAAAGcca                                                             >  2:672176/1‑100 (MQ=255)
                                         aaGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGccagg                                                           <  1:2878707/100‑1 (MQ=255)
                                          aGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGccaggc                                                          >  1:1552670/1‑100 (MQ=255)
                                          aGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGccaggc                                                          <  1:772749/100‑1 (MQ=255)
                                           ggcggcCCTGGTGGATCATGACTACATCAAGAGCAGCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGccaggcc                                                         >  1:2339480/1‑100 (MQ=255)
                                               gcCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGccaggcccagg                                                     >  2:2284804/1‑100 (MQ=255)
                                                   tggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGa                                                 <  1:1603176/100‑1 (MQ=255)
                                                   tggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGa                                                 >  1:1207446/1‑100 (MQ=255)
                                                   tggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGa                                                 <  2:737128/100‑1 (MQ=255)
                                                    ggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGaa                                                >  1:551861/1‑100 (MQ=255)
                                                    ggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGaa                                                >  2:1663645/1‑100 (MQ=255)
                                                    ggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGaa                                                >  2:19294/1‑100 (MQ=255)
                                                    ggtggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGaa                                                >  2:2024482/1‑100 (MQ=255)
                                                       ggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAagag                                             <  1:19293/100‑1 (MQ=255)
                                                       ggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAagag                                             >  2:2099466/1‑100 (MQ=255)
                                                       ggATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAagag                                             <  1:3197861/100‑1 (MQ=255)
                                                        natCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGcggtttttacagagatatcggtgctcttgatgttg                                            <  2:2628486‑M2/99‑36 (MQ=255)
                                                         aTCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGc                                           <  1:376064/100‑1 (MQ=255)
                                                         aTCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGc                                           <  2:419268/100‑1 (MQ=255)
                                                            aTGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGt                                        <  1:757574/100‑1 (MQ=255)
                                                             tGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTg                                       >  2:2856915/1‑100 (MQ=255)
                                                             tGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTg                                       <  2:2672513/100‑1 (MQ=255)
                                                               acaacaTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCCGTg                                       >  2:57839/1‑98 (MQ=255)
                                                               acaacaTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGaa                                     >  2:2606225/1‑100 (MQ=255)
                                                                caacaTCAAGAGCACCGATATCTCTGTAAAAACCGctcagggtcacgactttttgatcggtttttacagagatatcggtgctcttgatgttgtcatgatc                                    <  2:2630533‑M1/100‑66 (MQ=255)
                                                                 aacaTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAg                                   <  1:2001934/100‑1 (MQ=255)
                                                                 aacaTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAg                                   >  2:2344258/1‑100 (MQ=255)
                                                                 aacaTCAAGAGCACCGATATCTCTGTAAAAACCGAGCAAAAAGCCGTGACCCTGAGCGGTTGCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAg                                   <  2:1321971/100‑1 (MQ=255)
                                                                  acaTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGt                                  >  2:1112293/1‑100 (MQ=255)
                                                                   caTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTg                                 >  2:3081349/1‑100 (MQ=255)
                                                                    aTCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTgg                                >  1:1024371/1‑100 (MQ=255)
                                                                      cAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCg                              <  1:333371/100‑1 (MQ=255)
                                                                        agagCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGaa                            <  2:1638606/100‑1 (MQ=255)
                                                                        agagCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGaa                            >  1:1747835/1‑100 (MQ=255)
                                                                         gagCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGaaa                           <  2:427004/100‑1 (MQ=255)
                                                                           gCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAgg                         <  2:2085161/100‑1 (MQ=255)
                                                                              ccGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGt                      >  1:1122078/1‑100 (MQ=255)
                                                                                gATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTg                    >  2:2554308/1‑100 (MQ=255)
                                                                                 atatCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGa                   <  1:549161/100‑1 (MQ=255)
                                                                                 atatCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGa                   <  1:1529535/100‑1 (MQ=255)
                                                                                  tatCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGaa                  <  2:200466/100‑1 (MQ=255)
                                                                                    tctcTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAgg                >  1:56905/1‑100 (MQ=255)
                                                                                     ctctGTAAAAACCGCTAAAAAAGTCGTGACTCTGCGCGGCTTCGTTGAAACCCAGGCACACCCCGGAGACGCAGTGAAAGTCGCGAAAGGCgcaggagg                >  1:1656568/1‑92 (MQ=255)
                                                                                      tctGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAATCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCTAAAGGCGTTGAAgggg              <  1:2661330/100‑1 (MQ=255)
                                                                                      tctGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAgggg              >  2:1307549/1‑100 (MQ=255)
                                                                                       ctGTAAAAACCGATCAAAAAGTCGTGACCCTGAGcggtttttacagagatatcggtgctcttgatgttgtcatgatccaccagggccgccttcactttcg             <  1:2091461‑M2/100‑67 (MQ=255)
                                                                                       ctGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGt             >  1:296963/1‑100 (MQ=255)
                                                                                       ctGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGt             >  1:2653503/1‑100 (MQ=255)
                                                                                        tGTAAAAACCGATCAAAAAGTCGTGACCCTGAGcggtttttacagagatatcggtgctcttgatgttgtcatgatccaccagggccgccttcactttcgc            <  1:3214599‑M2/100‑68 (MQ=255)
                                                                                         gtcaaaaCCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAACGGCGTTGAAgggg              >  1:2407412/4‑97 (MQ=255)
                                                                                          tAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGCAGGGGTGAc          >  1:120248/1‑100 (MQ=255)
                                                                                          tAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGAc          <  2:2802634/100‑1 (MQ=255)
                                                                                          tAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGAc          >  1:797741/1‑100 (MQ=255)
                                                                                           aaaaaCCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGAcc         <  2:1442131/100‑1 (MQ=255)
                                                                                           aaaaaCCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGAcc         <  1:952157/100‑1 (MQ=255)
                                                                                             aaaCCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACctc       <  2:2493669/100‑1 (MQ=255)
                                                                                             aaaCCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACctc       <  2:2341165/100‑1 (MQ=255)
                                                                                              aaCCGctcagggtcacgactttttgatcggtttttacagagatatcggtgctcttgatgttgtcatgatccaccagggccgccttcactttcgcggtgat      <  2:2003306‑M1/100‑96 (MQ=255)
                                                                                                 cGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTc   <  2:1956084/100‑1 (MQ=255)
                                                                                                  gATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTCa  >  2:1876688/1‑100 (MQ=255)
                                                                                                  gATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTCa  >  1:1736583/1‑100 (MQ=255)
                                                                                                  gATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGACAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTCa  >  1:1517007/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TCGGTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTCA  >  NC_000913/4611544‑4611741

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.