New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4623916 =136 (1.100)4 (0.030) 4/166 NT 3.2% coding (202/1017 nt) lplA lipoate‑protein ligase A
?NC_000913 4623943 = 114 (0.990)coding (175/1017 nt) lplA lipoate‑protein ligase A
Rejected: Frequency below cutoff threshold.

Only 100 of 164 total aligned reads displayed.

AGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAG  >  NC_000913/4623817‑4624015
                                                                                                   |                                                                                                   
agaTAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAg                                                                                                     >  1:450520/1‑100 (MQ=255)
agaTAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAg                                                                                                     <  2:1975421/100‑1 (MQ=255)
 ccaaatgcccgccacgcagcgcgttctgtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccgg                                                                                                    <  2:2330604‑M1/2‑1 (MQ=255)
 ccaaatgcccgccacgcagcgcgttctgtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccgg                                                                                                    <  2:1513492‑M1/2‑1 (MQ=255)
   tAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCg                                                                                                  <  1:2446128/100‑1 (MQ=255)
   tAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCg                                                                                                  <  1:2367079/100‑1 (MQ=255)
   tAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCg                                                                                                  >  2:159328/1‑100 (MQ=255)
    aGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCgg                                                                                                 >  1:1306047/1‑100 (MQ=255)
     gTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTCCTGCGCCGCGCCAGGCgg                                                                                                 >  1:197248/1‑99 (MQ=255)
     gTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCgg                                                                                                 >  1:3051580/1‑99 (MQ=255)
     gTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGa                                                                                                >  1:1001364/1‑100 (MQ=255)
     gTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGa                                                                                                >  1:3272498/1‑100 (MQ=255)
     gTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGa                                                                                                >  1:74765/1‑100 (MQ=255)
      ttttATCGTACTCCGGCTTGCCAGCCATAAAGGTACAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCCCCAGGCGGAc                                                                                               >  2:3027928/1‑100 (MQ=255)
      ttttATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGAc                                                                                               <  1:3310363/100‑1 (MQ=255)
       tttATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACg                                                                                              <  2:2292644/100‑1 (MQ=255)
             gTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTAtct                                                                                        >  2:171664/1‑100 (MQ=255)
             gTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTAtct                                                                                        <  2:2948695/100‑1 (MQ=255)
               aCTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTAtcttc                                                                                      >  1:2509743/1‑100 (MQ=255)
                cTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCCCCGCTACTGCGCCGCGCCAGGCGGACGTTAtcttct                                                                                     >  2:292639/1‑100 (MQ=255)
                cTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTAtcttct                                                                                     >  2:914653/1‑100 (MQ=255)
                 tCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTAtcttct                                                                                     <  1:2182070/99‑1 (MQ=255)
                 tCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATcttctt                                                                                    >  2:2016921/1‑100 (MQ=255)
                  ccGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCttcttc                                                                                   <  1:845255/100‑1 (MQ=255)
                  ccGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCttcttc                                                                                   <  1:602930/100‑1 (MQ=255)
                  ccGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCttcttc                                                                                   <  2:399335/100‑1 (MQ=255)
                  ccGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCttcttc                                                                                   <  1:437360/100‑1 (MQ=255)
                  ccGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCttcttc                                                                                   <  2:1772331/100‑1 (MQ=255)
                    ggCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCa                                                                                 <  1:896441/100‑1 (MQ=255)
                      cTTGCCAGCCATACAGGTAAAGCAGGTATTGCCGAGATCGTCGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATc                                                                               <  2:986928/100‑1 (MQ=255)
                        tGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATccg                                                                             <  1:3313543/100‑1 (MQ=255)
                          ccagccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCTGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATccgcc                                                                           >  2:1116244/1‑100 (MQ=255)
                            gtttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccGGCGGACGTTATCTTCTTCCATCCGCCgg                                                                         >  2:1754911‑M1/72‑100 (MQ=255)
                             tttctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccGGCGGACGTTATCTTCTTCCATCCGCCggg                                                                        >  1:1454373‑M1/71‑100 (MQ=255)
                             gccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCggg                                                                        >  2:1253140/1‑100 (MQ=255)
                             gccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCggg                                                                        <  2:1233563/100‑1 (MQ=255)
                             gccaTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTCATCTTCTTCCATCCGCCggg                                                                        <  1:2047058/100‑1 (MQ=255)
                               caTAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTa                                                                      >  1:2328128/1‑100 (MQ=255)
                                ntAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTAt                                                                     >  2:1518991/2‑100 (MQ=255)
                                ctctggcgcaatgccgacacggtagtaattggtcgcgcgcagaacccgtggaaagagtgtaatacccGGCGGACGTTATCTTCTTCCATCCGCCGGGTAt                                                                     >  1:1749355‑M1/68‑100 (MQ=255)
                                 tAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTAtt                                                                    <  1:3108984/100‑1 (MQ=255)
                                 tAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTAtt                                                                    >  1:500739/1‑100 (MQ=255)
                                   aaGGTAAAGCAGGCATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTac                                                                  <  1:1538945/100‑1 (MQ=255)
                                    aGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTaca                                                                 >  1:703922/1‑100 (MQ=255)
                                     ggTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGCCGTCATCTTCTTCCATCCGCCGGGTATTacac                                                                >  1:2820714/1‑100 (MQ=255)
                                     ggTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTacac                                                                <  1:3022181/100‑1 (MQ=255)
                                     ggTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTacac                                                                >  1:1896791/1‑100 (MQ=255)
                                     ggTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTacac                                                                <  1:2767607/100‑1 (MQ=255)
                                        aaaGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACActct                                                             >  2:2491857/1‑100 (MQ=255)
                                          aGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACActct                                                             >  2:3231738/1‑98 (MQ=255)
                                          aGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTCCTTCCATCCGCCGGGTATTACACTCttt                                                           >  1:3274026/1‑100 (MQ=255)
                                           gCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTc                                                          >  1:1517373/1‑100 (MQ=255)
                                            cAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTcc                                                         >  1:2956685/1‑100 (MQ=255)
                                                tATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACgg                                                     <  2:1834228/100‑1 (MQ=255)
                                                 aTTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACggg                                                    >  1:958853/1‑100 (MQ=255)
                                                 aTTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACGGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACggg                                                    <  1:1567307/100‑1 (MQ=255)
                                                    gCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTc                                                 >  1:66103/1‑100 (MQ=255)
                                                    gCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGGGATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTc                                                 >  2:490411/1‑100 (MQ=255)
                                                      cGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTg                                               <  1:1847875/100‑1 (MQ=255)
                                                       gagaTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgc                                              >  1:221515/1‑100 (MQ=255)
                                                       gagaTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgc                                              >  2:451427/1‑100 (MQ=255)
                                                        agaTCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcg                                             <  2:2275375/100‑1 (MQ=255)
                                                           tCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcgcgc                                          <  1:942866/100‑1 (MQ=255)
                                                            cGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTgcgc                                            >  1:2675913/1‑97 (MQ=255)
                                                            cGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGcgcgcg                                         >  2:962640/1‑100 (MQ=255)
                                                            cGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGcgcgcg                                         <  1:1206129/100‑1 (MQ=255)
                                                             gTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGa                                        >  1:750547/1‑100 (MQ=255)
                                                              tGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGAc                                       <  1:2828197/100‑1 (MQ=255)
                                                              tGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGAc                                       <  1:428315/100‑1 (MQ=255)
                                                               ggAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGAcc                                      >  2:424844/1‑100 (MQ=255)
                                                                  acacCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAAt                                   <  2:1698440/100‑1 (MQ=255)
                                                                  acacCGCGCCGCCACCGCTACTGCGCCGCGACAGTCGGACGTTATCTTCTTCCATCCGCCCGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCa                                     >  2:2768562/1‑98 (MQ=255)
                                                                    acCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATta                                 <  2:905517/100‑1 (MQ=255)
                                                                     ccGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtac                                >  2:1306893/1‑100 (MQ=255)
                                                                     ccGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtac                                >  1:1807760/1‑100 (MQ=255)
                                                                       gcgcCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtacta                              <  2:3272524/100‑1 (MQ=255)
                                                                         gccgccACCGGTACTGCGCCGCGCCAGGCGGACGTTATCTTCGTCCATCCGCCGGGTATTACACTCCTTTCACGGGTTCTGCGCGCGACCAATTACTAcc                            <  1:2196375/100‑1 (MQ=255)
                                                                         gccgccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTAcc                            <  1:2491838/100‑1 (MQ=255)
                                                                           cgccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgt                          >  2:845763/1‑100 (MQ=255)
                                                                            gccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgtg                         >  2:81348/1‑100 (MQ=255)
                                                                             cccccGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATtactac                             <  1:2729826/92‑1 (MQ=255)
                                                                             ccACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCgtgt                        <  1:327952/100‑1 (MQ=255)
                                                                              cACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTc                       <  1:51386/100‑1 (MQ=255)
                                                                               aCCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCTGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCg                      <  1:2144439/100‑1 (MQ=255)
                                                                                ccGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCgg                     >  2:1024246/1‑100 (MQ=255)
                                                                                ccGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCgg                     <  1:2016907/100‑1 (MQ=255)
                                                                                    tACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCAtt                 >  1:230547/1‑100 (MQ=255)
                                                                                      cTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTgc               <  2:1001367/100‑1 (MQ=255)
                                                                                      cTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTgc               <  2:74766/100‑1 (MQ=255)
                                                                                      cTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTgc               >  2:435549/1‑100 (MQ=255)
                                                                                        gcgccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTgcgc             >  2:3196171/1‑100 (MQ=255)
                                                                                        gcgccgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTgcgc             >  2:1702516/1‑100 (MQ=255)
                                                                                            cgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCaga         <  2:2863543/100‑1 (MQ=255)
                                                                                            cgcgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCaga         <  2:2690842/100‑1 (MQ=255)
                                                                                              cgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAgaga       <  1:689376/100‑1 (MQ=255)
                                                                                              cgccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAgaga       <  2:2834994/100‑1 (MQ=255)
                                                                                               gccAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGaa      >  2:3270923/1‑100 (MQ=255)
                                                                                                 cAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAAc    <  2:3210398/100‑1 (MQ=255)
                                                                                                 cAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAAc    <  2:2213754/100‑1 (MQ=255)
                                                                                                   GGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAg  <  2:1461443‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCACCGCTACTGCGCCGCGCCAGGCGGACGTTATCTTCTTCCATCCGCCGGGTATTACACTCTTTCCACGGGTTCTGCGCGCGACCAATTACTACCGTGTCGGCATTGCGCCAGAGAAACAG  >  NC_000913/4623817‑4624015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.