New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)13 (0.120) 9/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 139 total aligned reads displayed.

CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931
                                                                                                   |                                                                                                   
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  1:3029304‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  1:906582‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:1176354‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:811344‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  1:719437‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:1447236‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:2912097‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:2558801‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:2611151‑M1/1‑100 (MQ=255)
                                tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacca                                                                     <  2:229693‑M1/100‑33 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  2:3341136‑M1/100‑37 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  1:1803293‑M1/100‑37 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATTGCGTTGCTGCTCTTTGTTCTTTGTCGAtgccaccatcagtgaggcacccagctcgaccaagaac                                                                <  2:1953950‑M1/100‑38 (MQ=255)
                                          tGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccaccattgaggcacccagctcgaccaagaacaaaga                                                           <  2:971770‑M1/100‑43 (MQ=255)
                                                                     gATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcactgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatca                                <  1:1012986‑M1/100‑70 (MQ=255)
                                                                                          nctTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtg           >  2:1859316‑M1/2‑10 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:406888‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:95547‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:3053144‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:1096420‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2445857‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1353363‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1286348‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2885224‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagt            <  1:3287633‑M1/98‑90 (MQ=255)
                                                                                            ttcgtcgAtgccaccatcattgaggcacccagctcgaccaagaacaaacagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2530962‑M1/97‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:548150‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:1183635‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:466047‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:96675‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1140128‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:1454468‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1963130‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2014588‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2393102‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2438682‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2791371‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:302011‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:498360‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  1:101801‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1129171‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2599925‑M1/100‑93 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:2963084‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:2885989‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  1:742022‑M1/1‑7 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:190905‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:2322970‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:639170‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:2229831‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:789977‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:1334989‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:2776943‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:2560501‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:2670892‑M1/1‑6 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaggaaaggcaatcagtggcact      >  2:3323219‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  2:495111‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2608068‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:382167‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:1216026‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:977055‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:584782‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1118072‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:101143‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:2378046‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:820356‑M1/1‑5 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:566062‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  1:2237557‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     <  2:2052943‑M1/100‑97 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  1:3268326‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  1:3141274‑M1/1‑4 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggggatgcgtcagaccaggaaaggcaatcagtggcacttt    >  1:2252495‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaagtcaatcagtggcacttt    >  1:2838367‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:851208‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  1:2966570‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:2753373‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgacgcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccatgaaaggcaatcagtggcacttt    <  1:1949001‑M1/100‑98 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1209361‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:765107‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:754912‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:2140219‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1803541‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:3326292‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:50150‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1401791‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:1708461‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1578520‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:2902597‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcatcgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:3214408‑M1/1‑2 (MQ=255)
                                                                                                   atgccaccatcattgtggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:3295078‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacctagctcgaccaagaactaagatcagcaacgcgatccggagatgcatcataccaagaaaggcaatcagtggcactttgg  <  1:1265564‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgttccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:1834427‑M1/96‑96 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:395687‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2084193‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1538720‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2843223‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:1600001‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:1505190‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:2682227‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:3248468‑M1/100‑100 (MQ=255)
                                                                                                   atgacaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:2162449‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.