New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2097239 =NA (NA)8 (0.070) 3/162 NT NA noncoding (3/30 nt) REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2097265 = NA (NA)noncoding (29/30 nt) REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences REP143 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 129 total aligned reads displayed.

TGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAA  >  NC_000913/2097140‑2097336
                                                                                                   |                                                                                                 
tGATGTATCACCTGCCGGCGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGc                                                                                                   >  1:2724757/1‑100 (MQ=255)
 gtgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCg                                                                                                  <  1:1211992‑M1/2‑1 (MQ=255)
 gtgctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCg                                                                                                  <  2:1379498‑M1/2‑1 (MQ=255)
 gATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCg                                                                                                  <  2:3291889/100‑1 (MQ=255)
 gATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCg                                                                                                  >  2:3241256/1‑100 (MQ=255)
 gATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCg                                                                                                  <  2:2437461/100‑1 (MQ=255)
   tGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGa                                                                                                >  2:380080/1‑100 (MQ=255)
    ctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGAt                                                                                               >  1:132362‑M1/96‑100 (MQ=255)
    ctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGAt                                                                                               <  1:148208‑M1/5‑1 (MQ=255)
    ctggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGAt                                                                                               <  2:1943818‑M1/5‑1 (MQ=255)
      ggggcgtaatgctctacgcaattacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGc                                                                                             <  1:3272281‑M1/7‑1 (MQ=255)
      aTCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGc                                                                                             >  1:302336/1‑100 (MQ=255)
       tCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCg                                                                                            <  2:2565654/100‑1 (MQ=255)
       tCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTCAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCTGGCGAAGCGGCTGc                                                                                             >  1:2721966/1‑99 (MQ=255)
        cACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGa                                                                                           >  1:17991/1‑100 (MQ=255)
        cACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGa                                                                                           >  2:2451396/1‑100 (MQ=255)
         aCCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCCGAGTAAGCGGATGCGat                                                                                          <  1:997289/100‑1 (MQ=255)
             gctgGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATAttg                                                                                      >  2:2948699/1‑100 (MQ=255)
              ctgGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATAttgt                                                                                     >  2:1513577/1‑100 (MQ=255)
              ctgGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATAttgt                                                                                     <  2:2652456/100‑1 (MQ=255)
                 gtgtTGTTGCAGGATCAGGCGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGTCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGc                                                                                  <  1:3286968/100‑1 (MQ=255)
                   gttgttGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCg                                                                                <  2:1780113/100‑1 (MQ=255)
                      gttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCAt                                                                             >  1:1954969/1‑100 (MQ=255)
                      gttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCAt                                                                             >  2:2990740/1‑100 (MQ=255)
                       ttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATc                                                                            <  1:642415/100‑1 (MQ=255)
                        tgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATcc                                                                           >  2:858155/1‑100 (MQ=255)
                         gCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCg                                                                          >  1:227030/1‑100 (MQ=255)
                         gCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCg                                                                          <  2:1816585/100‑1 (MQ=255)
                         gCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCg                                                                          >  2:1520582/1‑100 (MQ=255)
                           ttacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGc                                                                        >  2:3132735‑M1/73‑100 (MQ=255)
                           ttacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGc                                                                        >  1:150165‑M1/73‑100 (MQ=255)
                           aGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGc                                                                        <  1:972995/100‑1 (MQ=255)
                            tacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGCa                                                                       >  2:1788273‑M1/72‑100 (MQ=255)
                            tacaacgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGCa                                                                       >  2:1626105‑M1/72‑100 (MQ=255)
                            ggATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCa                                                                       >  1:692653/1‑100 (MQ=255)
                            ggATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCa                                                                       >  1:3068090/1‑100 (MQ=255)
                             gATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaa                                                                      >  2:2878631/1‑100 (MQ=255)
                              aTCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaa                                                                     >  1:383222/1‑100 (MQ=255)
                              aTCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaa                                                                     >  2:3085857/1‑100 (MQ=255)
                               tCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaa                                                                    >  1:2057816/1‑100 (MQ=255)
                                 cgcgaagtaatcttttcggttttaaagaaaaagggcagggtggtgacaccttgcccgtttttttgcCGGATGCGATATTGTTGCCGCATCCGGCaaaaaa                                                                  >  1:1616914‑M1/67‑100 (MQ=255)
                                  ggggCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaaaa                                                                 >  2:2245918/1‑100 (MQ=255)
                                    ggCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACg                                                               >  1:1379493/1‑100 (MQ=255)
                                    ggCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACg                                                               <  2:460039/100‑1 (MQ=255)
                                     gCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGTCGCATCCGGCAAAAAAACgg                                                              <  1:2046155/100‑1 (MQ=255)
                                     gCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACgg                                                              >  1:1461962/1‑100 (MQ=255)
                                     gCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACgg                                                              <  2:597875/100‑1 (MQ=255)
                                        ggATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCa                                                           >  2:2913837/1‑100 (MQ=255)
                                          aTTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAg                                                         <  1:1897830/100‑1 (MQ=255)
                                          aTTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAg                                                         >  2:1282583/1‑100 (MQ=255)
                                             tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                      >  2:2293706/1‑100 (MQ=255)
                                             tAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGgtg                                                      >  2:1078259/1‑100 (MQ=255)
                                               acgacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTc                                                    >  1:1456136/1‑100 (MQ=255)
                                               acgacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTc                                                    >  1:1512421/1‑100 (MQ=255)
                                                cgacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTca                                                   >  1:1275692/1‑100 (MQ=255)
                                                 gacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTcac                                                  >  2:2981483/1‑100 (MQ=255)
                                                 gacgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTcac                                                  >  2:2639988/1‑100 (MQ=255)
                                                  acgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTcacc                                                 <  2:3122052/100‑1 (MQ=255)
                                                   cgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTcacca                                                >  1:2223089/1‑100 (MQ=255)
                                                     gTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCaccacc                                              >  2:2100310/1‑100 (MQ=255)
                                                        aTTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACTGGCAAGGTGTCACCACCCTg                                           <  1:2050724/100‑1 (MQ=255)
                                                         ttGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTg                                           >  1:1919810/1‑99 (MQ=255)
                                                         ttGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGc                                          <  1:3315884/100‑1 (MQ=255)
                                                         ttGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGc                                          >  2:342373/1‑100 (MQ=255)
                                                          tGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGcc                                         >  1:2811768/1‑100 (MQ=255)
                                                          tGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGca                                         >  2:3315910/1‑99 (MQ=255)
                                                           nagaACCTGCGTAAACGACATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGccc                                        >  1:459731/2‑100 (MQ=255)
                                                           gagaACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGccc                                        >  2:1801307/1‑100 (MQ=255)
                                                             gaACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCtt                                      >  2:3009103/1‑100 (MQ=255)
                                                               aCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCtttt                                    <  1:2451378/100‑1 (MQ=255)
                                                               aCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCtttt                                    <  2:1051375/100‑1 (MQ=255)
                                                               aCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCtttt                                    >  1:2425831/1‑100 (MQ=255)
                                                                ccTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCttttt                                   >  2:1263819/1‑100 (MQ=255)
                                                                ccTGCGTAAACGGCAACAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCttttt                                   <  2:3303388/100‑1 (MQ=255)
                                                                  tGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTc                                  >  1:1136497/1‑99 (MQ=255)
                                                                   gCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCtt                                <  2:593615/100‑1 (MQ=255)
                                                                   gCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCtt                                <  2:874243/100‑1 (MQ=255)
                                                                   gCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTACCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCtt                                <  2:530521/100‑1 (MQ=255)
                                                                     gTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGGTGCGATATTGTAAACAAAAAAAAAAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTa                              <  1:2806541/100‑1 (MQ=255)
                                                                      tAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAACACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaa                             <  1:1513571/100‑1 (MQ=255)
                                                                      tAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaa                             <  1:380080/100‑1 (MQ=255)
                                                                      tAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaa                             >  1:1867551/1‑100 (MQ=255)
                                                                        aaCGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaaaa                           <  1:2293689/100‑1 (MQ=255)
                                                                         aCGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaa                             <  1:1792635/97‑1 (MQ=255)
                                                                            gCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGa                       >  1:2566495/1‑100 (MQ=255)
                                                                               tgaGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGaaaa                    >  2:2264638/3‑100 (MQ=255)
                                                                               tCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGaaaa                    >  1:2750367/1‑100 (MQ=255)
                                                                                cAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAg                   <  2:1136282/100‑1 (MQ=255)
                                                                                  gTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGAt                 >  2:172995/1‑100 (MQ=255)
                                                                                  gTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGAt                 <  1:466800/100‑1 (MQ=255)
                                                                                     aGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTAc              >  1:365901/1‑100 (MQ=255)
                                                                                         gCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcg          <  1:3320901/100‑1 (MQ=255)
                                                                                         gCGGAGTAAGCGTATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcg          <  2:3129598/100‑1 (MQ=255)
                                                                                          cGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcgc         <  2:2750390/100‑1 (MQ=255)
                                                                                           ggggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcgcg        <  1:2713198/100‑1 (MQ=255)
                                                                                            gggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGt       <  1:3085830/100‑1 (MQ=255)
                                                                                            gggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGt       >  2:387433/1‑100 (MQ=255)
                                                                                            gggTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGt       <  2:2851402/100‑1 (MQ=255)
                                                                                                aaGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTa   >  1:2863456/1‑100 (MQ=255)
                                                                                                 aGCGGATGCGATATTGTTGCCGCATCCTGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGCAAAGATTACTTCGCGTTGTaa  >  1:2169306/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
TGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAA  >  NC_000913/2097140‑2097336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.