BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2146653	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (54/84 nt)	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 2146683	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (84/84 nt)	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP147 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 152 total aligned reads displayed.

GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGC  >  NC_000913/2146554‑2146752

gTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAg                                                                                                     <  1:1903284/100‑1 (MQ=255)

 tGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGg                                                                                                    >  1:1125281‑M1/1‑99 (MQ=255)

 tGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAACCGCTCATTCCCCAGg                                                                                                    >  2:3297196‑M1/1‑99 (MQ=255)

     tagtagTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgg                                                                                                >  1:815417‑M1/1‑95 (MQ=255)

     tagtagTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccgg                                                                                                <  1:2599202‑M1/100‑6 (MQ=255)

      agtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggn                                                                                               <  2:1432433‑M1/100‑7 (MQ=255)

       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                              >  2:3260032‑M1/1‑93 (MQ=255)

       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                              >  2:1008055‑M1/1‑93 (MQ=255)

       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                              >  1:1461426‑M1/1‑93 (MQ=255)

       gtagtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggat                                                                                              >  2:3325740‑M1/1‑93 (MQ=255)

         agtTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATaa                                                                                            >  1:2048918/1‑100 (MQ=255)

           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                          <  2:226312/100‑1 (MQ=255)

           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                          <  1:3072776/100‑1 (MQ=255)

           ttATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAgg                                                                                          <  2:513511/100‑1 (MQ=255)

            tATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgc                                                                                         <  1:1022195/100‑1 (MQ=255)

             aTTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcg                                                                                        >  1:2294560/1‑100 (MQ=255)

              tttCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGAGGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGgcgc                                                                                       <  2:2009677/100‑1 (MQ=255)

                  gcgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGc                                                                                   >  2:754129/1‑100 (MQ=255)

                   cgATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCa                                                                                  >  1:1425444/1‑100 (MQ=255)

                     aTTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACATATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCAcc                                                                                <  1:1789704/100‑1 (MQ=255)

                      ttAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCg                                                                               <  1:128430/100‑1 (MQ=255)

                       tAACTGAGGCGTGCTTCCCCATCGCCTGATGCGAAGCAAACGCGTCTTATCATGCCTACAAATCGCTCATTACCCAGGCCGGATAACGCGCTCTCAccac                                                                              >  1:531359/1‑98 (MQ=37)

                        aaCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCA                                                                             <  1:2304156‑M2/100‑1 (MQ=255)

                         aCTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCAT                                                                            <  2:3283327‑M2/100‑1 (MQ=255)

                          cTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATC                                                                           <  1:987592‑M2/100‑1 (MQ=255)

                            gAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCG                                                                         <  2:3149966‑M2/100‑1 (MQ=255)

                             aGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGG                                                                        <  1:392020‑M2/100‑1 (MQ=255)

                             aGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCC                                                                          >  1:395322‑M2/1‑98 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggc                                                                       <  1:557189‑M1/100‑31 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                       >  2:469468‑M2/1‑100 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                       >  1:1627994‑M2/1‑100 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                       <  1:1731070‑M2/100‑1 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                       <  1:1991218‑M2/100‑1 (MQ=255)

                              ggCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGC                                                                       <  2:2656187‑M2/100‑1 (MQ=255)

                                   gCTTCCCCATCGCCTGATGCGACGCTAACGCGTGTTATGATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGAcc                                                                   <  1:1400758/99‑1 (MQ=255)

                                   gCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctggg                                                                  <  2:253483‑M1/100‑36 (MQ=255)

                                   gCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCa                                                                  <  1:126002/100‑1 (MQ=255)

                                    cTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctgggg                                                                 <  2:2814617‑M1/100‑37 (MQ=255)

                                    cTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCaa                                                                 >  1:2978898/1‑100 (MQ=255)

                                    cTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAAGCGCTCATTCCCCAGgccggatgcggtgcgagcgccttatccggcctgggg                                                                 <  1:617928‑M1/100‑37 (MQ=255)

                                      tCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACg                                                               >  1:2777973/1‑100 (MQ=255)

                                        cccATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTc                                                             <  2:607749/100‑1 (MQ=255)

                                          cATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                           >  2:3180135/1‑100 (MQ=255)

                                          cATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCAt                                                           >  2:82149/1‑100 (MQ=255)

                                            tCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGc                                                         <  1:2693128/100‑1 (MQ=255)

                                              gCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCtt                                                       >  2:3095402/1‑100 (MQ=255)

                                              gCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCtt                                                       >  2:1789463/1‑100 (MQ=255)

                                                 tGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGt                                                    >  1:429465/1‑100 (MQ=255)

                                                  gATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTc                                                   <  2:2304173/100‑1 (MQ=255)

                                                   aTGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCt                                                  >  2:741659/1‑100 (MQ=255)

                                                    tGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTg                                                 >  1:451186/1‑100 (MQ=255)

                                                      cGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGt                                               >  1:2619242/1‑100 (MQ=255)

                                                      cGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGt                                               <  1:3325714/100‑1 (MQ=255)

                                                       gACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGtt                                              >  2:1076618/1‑100 (MQ=255)

                                                       gACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGtt                                              <  2:587637/100‑1 (MQ=255)

                                                        aCGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTg                                             <  1:2455895/100‑1 (MQ=255)

                                                         cGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGc                                            >  2:1104759/1‑100 (MQ=255)

                                                         cGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGc                                            >  1:3126697/1‑100 (MQ=255)

                                                          gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGcc                                           <  1:3243453/100‑1 (MQ=255)

                                                          gCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGcc                                           >  1:2729187/1‑100 (MQ=255)

                                                             aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAgn                                        <  2:1735545/100‑2 (MQ=255)

                                                             aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGc                                        >  2:440146/1‑100 (MQ=255)

                                                             aaCGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGc                                        >  2:443880/1‑100 (MQ=255)

                                                               cgcgTCTCATCATGCCTACAAATCGCTCATTCCCCAGGCCTGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGcc                                       <  1:3300191/99‑1 (MQ=255)

                                                                  gTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTcc                                   <  2:1425450/100‑1 (MQ=255)

                                                                   tCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCg                                  <  1:710503/100‑1 (MQ=255)

                                                                    cTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGt                                 <  1:3208461/100‑1 (MQ=255)

                                                                      tATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtat                               <  2:1631492/100‑1 (MQ=255)

                                                                      tATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtat                               >  2:1578813/1‑100 (MQ=255)

                                                                       aTCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtata                              <  2:1963459/100‑1 (MQ=255)

                                                                       aTCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtata                              <  1:2372447/100‑1 (MQ=255)

                                                                       aTCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGtata                              <  1:2348261/100‑1 (MQ=255)

                                                                        tCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAc                             >  2:1639478/1‑100 (MQ=255)

                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            >  1:47858/1‑100 (MQ=255)

                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            <  2:1277964/100‑1 (MQ=255)

                                                                         cATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATAcc                            <  2:2162510/100‑1 (MQ=255)

                                                                          aTGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCa                           <  2:3072821/100‑1 (MQ=255)

                                                                          aTGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCa                           <  2:1507695/100‑1 (MQ=255)

                                                                          aTGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCa                           <  1:443880/100‑1 (MQ=255)

                                                                           tGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAg                          >  2:1219774/1‑100 (MQ=255)

                                                                           tGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAg                          >  2:2245966/1‑100 (MQ=255)

                                                                            gCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGa                         <  2:2064769/100‑1 (MQ=255)

                                                                             cgatctaaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        <  2:2970487/94‑1 (MQ=255)

                                                                             ccTACCAATCGCTCATTCACCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGa                         >  1:3027838/1‑99 (MQ=255)

                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        >  1:720828/1‑100 (MQ=255)

                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        <  2:3071166/100‑1 (MQ=255)

                                                                             ccTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCACATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGat                        >  2:2972830/1‑100 (MQ=255)

                                                                                  aaaTCGCTCATTCCCCAGGCCTGATAAGGCGCTCGCACCGCATCCGGCGACCATCGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCa                   <  1:414454/100‑1 (MQ=255)

                                                                                   aaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGatagatcg                  >  1:2970461/1‑95 (MQ=255)

                                                                                   aaTCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGc                    >  1:493393/1‑98 (MQ=255)

                                                                                     tCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTG‑CAGCCTTCCGTATACCAGATATGCAACAg               <  1:19342/100‑1 (MQ=255)

                                                                                      cGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAg               <  2:2448968/100‑1 (MQ=255)

                                                                                           aTTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCAt          >  2:3022229/1‑100 (MQ=255)

                                                                                             tCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATaa        >  2:372656/1‑100 (MQ=255)

                                                                                              ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgctttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaag       <  1:617928‑M2/100‑65 (MQ=255)

                                                                                              ccccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaag       <  2:2814617‑M2/100‑65 (MQ=255)

                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCctggggaatgagcgatttgtaggcatgataagacgcgttagcgtcgcatcaggcgatggggaagc      <  2:253483‑M2/100‑66 (MQ=255)

                                                                                               cccAGGCCGGATAAGGCGCTCGCACCGCATCCGGCCACCACGGTCATGCTTCCTACGGTTCCCAGCCCTACGTACACCCGTTATGCAACATCGCATacaa      >  1:3051698/1‑97 (MQ=16)

                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCCACAGCGCATAAGAACGc  >  1:2870715/1‑100 (MQ=255)

                                                                                                   ggCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGc  >  2:3016229/1‑100 (MQ=255)

GTGAATAGTAGTTATTTCGCGATTAACTGAGGCGTGCTTCCCCATCGCCTGATGCGACGCTAACGCGTCTTATCATGCCTACAAATCGCTCATTCCCCAGGCCGGATAAGGCGCTCGCACCGCATCCGGCGACCAACGTCATGCTTCGTCTGGTTGCCAGCCTTCCGTATACCAGATATGCAACAGCGCATAAGAACGC  >  NC_000913/2146554‑2146752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.