New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 72136 =NA (NA)7 (0.060) 6/164 NT NA noncoding (1/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 72169 = NA (NA)noncoding (34/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 156 total aligned reads displayed.

GGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCC  >  NC_000913/72037‑72235
                                                                                                   |                                                                                                   
aaggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagg                                                                                                     >  2:2716860‑M1/100‑100 (MQ=255)
 aggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGc                                                                                                    >  2:1788024‑M1/99‑100 (MQ=255)
  tggCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGc                                                                                                    >  1:475516/1‑99 (MQ=255)
  ggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGcc                                                                                                   <  1:1396962‑M1/3‑1 (MQ=255)
  ggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGcc                                                                                                   <  1:1589956‑M1/3‑1 (MQ=255)
   ggCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCt                                                                                                  <  2:790010/100‑1 (MQ=255)
    cgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTg                                                                                                 >  1:124331‑M1/96‑100 (MQ=255)
    cgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTg                                                                                                 >  1:1535929‑M1/96‑100 (MQ=255)
    cgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTg                                                                                                 >  2:3055007‑M1/96‑100 (MQ=255)
    cgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTg                                                                                                 >  2:450394‑M1/96‑100 (MQ=255)
     cgcTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGa                                                                                                >  2:818987/1‑100 (MQ=255)
     cgcTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGa                                                                                                >  1:1346610/1‑100 (MQ=255)
        tggtggTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGc                                                                                             <  1:2856477/100‑1 (MQ=255)
        tggtggTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGc                                                                                             <  2:688120/100‑1 (MQ=255)
        tggtggTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGc                                                                                             <  1:1586234/100‑1 (MQ=255)
         ggtggtGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATg                                                                                              <  1:444435/98‑1 (MQ=255)
         ggtggtGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCg                                                                                            >  1:2204988/1‑100 (MQ=255)
          gtggtgTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGa                                                                                           >  2:2092865/1‑100 (MQ=255)
              tgtTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGTCTGATGCGACGCt                                                                                       >  2:2953187/1‑100 (MQ=255)
              tgtTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCt                                                                                       >  1:480450/1‑100 (MQ=255)
               gtTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGc                                                                                        <  1:2509317/98‑1 (MQ=255)
               gtTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCtt                                                                                      >  1:3274321/1‑100 (MQ=255)
               gtTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCtt                                                                                      >  2:2398965/1‑100 (MQ=255)
                 tAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGc                                                                                    >  2:1901171/1‑100 (MQ=255)
                 tAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGc                                                                                    >  2:1900896/1‑100 (MQ=255)
                 tAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGc                                                                                    <  1:2850049/100‑1 (MQ=255)
                      cGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGt                                                                               >  2:3103150/1‑100 (MQ=255)
                       gCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTc                                                                              >  2:229214/1‑100 (MQ=255)
                       gCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTc                                                                              >  2:2628581/1‑100 (MQ=255)
                       gCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTc                                                                              >  1:19751/1‑100 (MQ=255)
                         cACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCtt                                                                            <  1:1015464/100‑1 (MQ=255)
                           cccGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                          >  1:227539/1‑100 (MQ=255)
                            ccGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                         >  1:590379/1‑100 (MQ=255)
                              gTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                       <  1:2550097/100‑1 (MQ=255)
                              gTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                       >  2:1568692/1‑100 (MQ=255)
                              gTTGATGCCGGTGTATAGCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                       <  1:2997201/100‑1 (MQ=255)
                               ttGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                       <  1:869596/99‑1 (MQ=255)
                               cgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAgg                                                                      >  2:2503673‑M1/69‑100 (MQ=255)
                                 ggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    >  2:1396967‑M1/67‑100 (MQ=255)
                                 gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    >  1:1090174/1‑100 (MQ=255)
                                 gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    >  1:411227/1‑100 (MQ=255)
                                 gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    <  1:2127569/100‑1 (MQ=255)
                                  gttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                   >  1:249220‑M1/66‑100 (MQ=255)
                                  aTGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                   >  1:953440/1‑100 (MQ=255)
                                   ttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                  >  1:1730472‑M1/65‑100 (MQ=255)
                                   tGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                  <  2:2772639/100‑1 (MQ=255)
                                   tGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                  >  1:2826219/1‑100 (MQ=255)
                                    tagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                 >  1:465885‑M1/64‑100 (MQ=255)
                                    tagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                 >  2:2424831‑M1/64‑100 (MQ=255)
                                    gCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                 <  1:2122297/100‑1 (MQ=255)
                                         tgtATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGACTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAc                                                            >  1:2451000/1‑100 (MQ=255)
                                           tataTCGATATTTTGGGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                          <  1:1672149/100‑1 (MQ=255)
                                           tataTCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                          >  1:3233152/1‑100 (MQ=255)
                                           tataTCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                          <  1:2426882/100‑1 (MQ=255)
                                           tataTCGATATTATGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                          >  2:2193980/1‑100 (MQ=255)
                                             tatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                                                        >  2:691526/1‑100 (MQ=255)
                                              atCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACt                                                       >  2:3028688/1‑100 (MQ=255)
                                              atCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACt                                                       >  2:553638/1‑100 (MQ=255)
                                               tCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTa                                                      >  2:1072104/1‑100 (MQ=255)
                                                cGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAc                                                     >  1:910845/1‑100 (MQ=255)
                                                 gATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAcc                                                    <  2:3338896/100‑1 (MQ=255)
                                                 gATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAcc                                                    <  1:1568686/100‑1 (MQ=255)
                                                    atTTTGCGTAAAGAGGTTGGGGTTTAGGAGATAGTCTTCTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGt                                                 >  1:2071103/1‑100 (MQ=255)
                                                     ttttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTa                                                <  2:3216587/100‑1 (MQ=255)
                                                       ttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                                              <  2:2714236/100‑1 (MQ=255)
                                                         gCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTc                                            >  1:2650441/1‑100 (MQ=255)
                                                         gCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTc                                            >  1:1875159/1‑100 (MQ=255)
                                                          cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCg                                           <  2:227540/100‑1 (MQ=255)
                                                          cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCg                                           >  2:1341449/1‑100 (MQ=255)
                                                          cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCg                                           <  1:3230461/100‑1 (MQ=255)
                                                          cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCGTATCAGGCCTACAAAACGCACTACCCGTAGGTCg                                           >  1:749663/1‑100 (MQ=255)
                                                           gTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCAGCGTCTTATCAGGCCTACAAAACGCACTCCCCGTAGGTCgg                                          >  2:777163/1‑100 (MQ=255)
                                                            tAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGa                                         >  1:266361/1‑100 (MQ=255)
                                                            tAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGa                                         >  1:123683/1‑100 (MQ=255)
                                                             aaaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGAt                                        >  1:82379/1‑100 (MQ=255)
                                                                 tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                    <  1:375416/100‑1 (MQ=255)
                                                                   gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCggctgcggcg                                  >  1:1162515/1‑92 (MQ=255)
                                                                    ttGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGt                                 >  1:2942100/1‑100 (MQ=255)
                                                                    ttGGGGTTTACGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTTCAGAACGCACTACCCGTAGGTCGGATAAGGCGt                                 <  1:2193963/100‑1 (MQ=255)
                                                                     tGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGtt                                <  1:563737/100‑1 (MQ=255)
                                                                      ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                               >  2:1233669/1‑100 (MQ=255)
                                                                      ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                               >  2:1231723/1‑100 (MQ=255)
                                                                      ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                               >  1:521602/1‑100 (MQ=255)
                                                                       gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGAtgcggcgtgaa                              <  2:1162518/100‑11 (MQ=255)
                                                                        ggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGCTAAGGCGTTCAc                             >  1:2099425/1‑100 (MQ=255)
                                                                         gTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                            <  1:1901285/100‑1 (MQ=255)
                                                                            tAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgccg                         <  2:2008128/100‑1 (MQ=255)
                                                                             aGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgccgc                        >  2:2124696/1‑100 (MQ=255)
                                                                              ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCa                       >  1:762738/1‑100 (MQ=255)
                                                                              ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCa                       >  2:1103266/1‑100 (MQ=255)
                                                                              ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCa                       >  2:1170040/1‑100 (MQ=255)
                                                                              ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTGCACGCCGCa                       >  2:3004565/1‑100 (MQ=255)
                                                                                       cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt              >  2:1977548/1‑100 (MQ=255)
                                                                                         tgtgCGGGTTGCCTAATGCGACGCTTGCCGCGTCTTATCAGGCATACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGAATCCGACa                <  1:1472805/96‑1 (MQ=255)
                                                                                          gtgtgggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa           <  2:1086256/96‑1 (MQ=255)
                                                                                          gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa           >  2:1515932/1‑100 (MQ=255)
                                                                                           tgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCAt          <  1:2563266/100‑1 (MQ=255)
                                                                                             cGGGTTGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATAc        >  2:3074955/1‑100 (MQ=255)
                                                                                             cGGGTTGCCGGATGCGACGCTTGCCGCGTCTGATCAGGCCTACAGAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATAc        <  2:3024152/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc  <  1:1070351‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCC  >  NC_000913/72037‑72235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.