New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3910443 =NA (NA)3 (0.030) 3/168 NT NA noncoding (1/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3910474 = NA (NA)noncoding (32/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 160 total aligned reads displayed.

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573
                                                                                                   |                                                                                                   
aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     >  1:1818374/1‑100 (MQ=255)
aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     <  2:2829005/100‑1 (MQ=255)
aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGGTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     <  1:2538337/100‑1 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  1:2324304/1‑100 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  1:826211/1‑100 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  1:2974703/1‑100 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  2:75931/1‑100 (MQ=255)
  aaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                                                   <  2:2603571/100‑1 (MQ=255)
   aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                                                  <  2:1099478/100‑1 (MQ=255)
   aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                                                  >  2:409201/1‑100 (MQ=255)
     cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                 <  1:780626/99‑1 (MQ=255)
     cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                <  1:2934110/100‑1 (MQ=255)
      gctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGt                                                                                               >  1:1138032‑M1/63‑100 (MQ=255)
       ggCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtt                                                                                              >  1:2720175/1‑100 (MQ=255)
         cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                                                            <  2:2075669/100‑1 (MQ=255)
          cgtggaagacaaatatcaaagacagtagcggtaagccgctgtactaataaaactccacGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                           >  1:1802525‑M1/59‑100 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:3233006/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:2241594/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  2:1217600/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:1771890/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  2:2720198/100‑1 (MQ=255)
             gTTGCAGCCTTAAGTTACTCTTCAGTTAAACGCGTTTACAAATTCATTTTGTAATGCCGGATGCGACGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:2198634/99‑1 (MQ=255)
             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        <  1:913387/100‑1 (MQ=255)
             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        <  2:603849/100‑1 (MQ=255)
               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      >  2:1442296/1‑100 (MQ=255)
                 cAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc                                                                                    >  1:140478/1‑100 (MQ=255)
                  aGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACa                                                                                   <  2:1082601/100‑1 (MQ=255)
                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                  >  2:92336/1‑100 (MQ=255)
                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGAGTAAAACACCGTACCCGGCCTGGAGATTTATTAGTAc                                                                                    >  1:1944267/1‑98 (MQ=255)
                    ccATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCGGGAGTTTTATTAGTACAGc                                                                                 >  1:1029429/1‑100 (MQ=255)
                     cATTAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCg                                                                                <  1:2643045/100‑1 (MQ=255)
                       tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                                                              <  1:914164/100‑1 (MQ=255)
                       tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                                                              <  2:941802/100‑1 (MQ=255)
                           ttACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAc                                                                          <  1:448818/100‑1 (MQ=255)
                             aCTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg                                                                        <  1:2360617/100‑1 (MQ=255)
                             aCTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg                                                                        <  1:1372240/100‑1 (MQ=255)
                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  1:748830/1‑100 (MQ=255)
                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:1489177/1‑100 (MQ=255)
                                 ttCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTAc                                                                    <  2:604586/100‑1 (MQ=255)
                                  tCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACt                                                                   >  1:3067811/1‑100 (MQ=255)
                                  tCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACt                                                                   >  2:2331488/1‑100 (MQ=255)
                                   cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                  <  2:338156/100‑1 (MQ=255)
                                   cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                  <  2:1905503/100‑1 (MQ=255)
                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                >  2:341068/1‑100 (MQ=255)
                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                >  1:3225103/1‑100 (MQ=255)
                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                <  2:252351/100‑1 (MQ=255)
                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                >  2:19438/1‑100 (MQ=255)
                                      ttAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCt                                                               <  2:3111951/100‑1 (MQ=255)
                                      ttAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCt                                                               <  2:2020582/100‑1 (MQ=255)
                                       tAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt                                                              >  2:1892214/1‑100 (MQ=255)
                                        aaaCGCGTTTACAAAGTCATTTTGGAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             <  2:1811223/100‑1 (MQ=255)
                                             cgTTTACAAAGTCATTTTGTAATGCGGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        <  1:2443471/100‑1 (MQ=255)
                                             cgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        <  1:2086493/100‑1 (MQ=255)
                                              gTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATAtt                                                       >  2:136942/1‑100 (MQ=255)
                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGTGTAAAACACCGTACCCCGCCTTGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgc                                                     <  1:3122686/100‑2 (MQ=255)
                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:2412496/100‑1 (MQ=255)
                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:2896714/100‑1 (MQ=255)
                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  1:2825381/100‑1 (MQ=255)
                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  1:2281693/100‑1 (MQ=255)
                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  1:591400/1‑100 (MQ=255)
                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTATCTTTAATATTGGTCt                                                  >  1:1953525/1‑100 (MQ=255)
                                                    aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCtt                                                 <  1:1892202/100‑1 (MQ=255)
                                                     aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTc                                                >  2:1329868/1‑100 (MQ=255)
                                                     aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTc                                                >  1:2953600/1‑100 (MQ=255)
                                                        tCATTTTGTAATGCCGGATGCGGCATAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCAc                                             <  1:2784882/100‑1 (MQ=255)
                                                         cATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACg                                            >  1:3285175/1‑100 (MQ=255)
                                                             actccaggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgc                                        >  1:1138032‑M2/39‑100 (MQ=255)
                                                              tGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgcg                                       >  1:795081/1‑100 (MQ=255)
                                                              tGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgcg                                       >  1:1646360/1‑100 (MQ=255)
                                                               gTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgcgc                                      >  1:1209130/1‑100 (MQ=255)
                                                                tAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                     >  2:1453366/1‑100 (MQ=255)
                                                                   tGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAc                                  <  2:717354/100‑1 (MQ=255)
                                                                   tGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAc                                  <  2:1946578/100‑1 (MQ=255)
                                                                   ggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAc                                  >  1:627547‑M2/33‑100 (MQ=255)
                                                                    GCCGGATGTGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  2:1524664‑M1/1‑100 (MQ=255)
                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  2:1782864‑M1/1‑100 (MQ=255)
                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  1:1310493‑M1/1‑100 (MQ=255)
                                                                        GATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGtt                             <  2:56512‑M1/100‑1 (MQ=255)
                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           >  2:1282639/1‑100 (MQ=255)
                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:1646910/100‑1 (MQ=255)
                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:499181/100‑1 (MQ=255)
                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         >  1:1063302/1‑100 (MQ=255)
                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         >  2:240411/1‑100 (MQ=255)
                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         <  2:1582477/100‑1 (MQ=255)
                                                                              gcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTa                       >  2:2814779/1‑100 (MQ=255)
                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  1:345027/100‑1 (MQ=255)
                                                                                   aaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTa                  >  2:3215605/1‑100 (MQ=255)
                                                                                    aaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTAt                 <  2:2844945/100‑1 (MQ=255)
                                                                                      cacCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATcc               <  1:1282635/100‑1 (MQ=255)
                                                                                         cGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  1:409201/100‑1 (MQ=255)
                                                                                         cGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  1:136941/100‑1 (MQ=255)
                                                                                          gTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCa           <  1:1853142/100‑1 (MQ=255)
                                                                                            aCCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAgg         >  2:2138780/1‑100 (MQ=255)
                                                                                              ccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCCACTACACTATCCGGCAGGCt       >  2:1312096‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCt       >  2:679736‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCt       <  2:912651‑M2/95‑1 (MQ=255)
                                                                                               cggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTg      >  2:421100‑M2/5‑100 (MQ=255)
                                                                                                ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     <  2:1105786‑M2/97‑1 (MQ=255)
                                                                                                ggcCTGAAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     <  2:2974729‑M2/97‑1 (MQ=255)
                                                                                                   cTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGt  <  1:2121711/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.