BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4450948 =	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (5/85 nt)	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4450978 =	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (35/85 nt)	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 143 total aligned reads displayed.

AAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCA  >  NC_000913/4450880‑4451077

aaaGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGa                                                                                                    >  1:1037454/1‑100 (MQ=255)

 gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                                                   >  1:858023‑M1/68‑100 (MQ=255)

 gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                                                   >  2:277355‑M1/68‑100 (MQ=255)

 aagaagAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                                                   >  1:1408430/1‑100 (MQ=255)

   gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                                 >  1:2373997/1‑100 (MQ=255)

   gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                                 <  1:875507/100‑1 (MQ=255)

     agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTg                                                                                               >  2:1514382/1‑100 (MQ=255)

      gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGc                                                                                              >  1:2120383/1‑100 (MQ=255)

      gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGc                                                                                              >  2:1202269/1‑100 (MQ=255)

         ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                                                           <  1:2957485/100‑1 (MQ=255)

         ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                                                           >  1:1706748/1‑100 (MQ=255)

         ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                                                           <  2:2871866/100‑1 (MQ=255)

         ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                                                           <  2:2856028/100‑1 (MQ=255)

           agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGa                                                                                         >  2:210370/1‑100 (MQ=255)

           agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGa                                                                                         >  1:1510037/1‑100 (MQ=255)

              gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                                                      >  2:1291143/1‑100 (MQ=255)

               aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGcn                                                                                     <  2:2548237/100‑2 (MQ=255)

               aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGcc                                                                                     <  2:1911644/100‑1 (MQ=255)

               aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGcc                                                                                     <  1:3142580/100‑1 (MQ=255)

                agaagaaAAATATGTGGTATTGAGGGGTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                    <  2:1949947/100‑1 (MQ=255)

                agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                    <  2:1592602/100‑1 (MQ=255)

                agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                    <  2:3305878/100‑1 (MQ=255)

                  tcttccgatctGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                                                  <  1:1816720/90‑1 (MQ=255)

                  aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                                                  <  1:1750527/100‑1 (MQ=255)

                  aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                                                  <  1:2173933/100‑1 (MQ=255)

                   agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                                                  >  1:1130534/1‑99 (MQ=255)

                   agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                                                 >  2:1152373/1‑100 (MQ=255)

                    gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                                >  2:773285/1‑100 (MQ=255)

                    gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                                <  2:661456/100‑1 (MQ=255)

                    gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                                <  2:2764459/100‑1 (MQ=255)

                     aaaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGc                                                                               <  2:614520/100‑1 (MQ=255)

                      aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGTTTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                                              >  1:2056069/1‑100 (MQ=255)

                        aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                                                            >  2:3259524/1‑100 (MQ=255)

                         atatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACg                                                                           >  1:661763/1‑100 (MQ=255)

                           atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt                                                                         <  1:889365/100‑1 (MQ=255)

                             ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                                                       >  2:1878462/1‑100 (MQ=255)

                             ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                                                       >  2:2810693/1‑100 (MQ=255)

                              gggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAc                                                                      <  2:3000769/100‑1 (MQ=255)

                                gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg                                                                    >  2:2073010/1‑100 (MQ=255)

                                  aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAGGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGACGCCTGCTGCGCCCCttgc                                                                      >  1:2895435/1‑94 (MQ=37)

                                   ttGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt                                                                 >  2:1199454/1‑100 (MQ=255)

                                    tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGt                                                                 <  2:1927421/99‑1 (MQ=255)

                                    tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                                <  2:1037457/100‑1 (MQ=255)

                                    tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                                <  2:2734381/100‑1 (MQ=255)

                                    tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                                <  1:733801/100‑1 (MQ=255)

                                     gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                                >  1:905126/1‑99 (MQ=255)

                                     gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                               >  1:2002264/1‑100 (MQ=255)

                                        ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                                                            >  2:2372980/1‑100 (MQ=255)

                                         gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc                                                           <  2:3043006/100‑1 (MQ=255)

                                          ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                                                          <  1:151668/100‑1 (MQ=255)

                                          ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                                                          <  2:1650195/100‑1 (MQ=255)

                                             cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc                                                       >  2:2749616/1‑100 (MQ=255)

                                             cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGc                                                       >  1:3310055/1‑100 (MQ=255)

                                              tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc                                                      >  1:1045847/1‑100 (MQ=255)

                                               aTGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt                                                     <  2:1510043/100‑1 (MQ=255)

                                                 gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc                                                   >  2:2518438/1‑100 (MQ=255)

                                                  ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt                                                  >  2:1086808/1‑100 (MQ=255)

                                                  ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt                                                  >  1:529932/1‑100 (MQ=255)

                                                    tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg                                                <  2:312903/100‑1 (MQ=255)

                                                     gATGCCGATTCGGAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                                               >  2:2193366/1‑100 (MQ=255)

                                                      aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                                              >  1:2244500/1‑100 (MQ=255)

                                                      aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                                              <  2:2425887/100‑1 (MQ=255)

                                                      aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                                              <  1:1908872/100‑1 (MQ=255)

                                                       tGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg                                             <  1:1485479/100‑1 (MQ=255)

                                                       tGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg                                             <  1:173053/100‑1 (MQ=255)

                                                        gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                            <  2:110853/100‑1 (MQ=255)

                                                        gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                            >  2:1725034/1‑100 (MQ=255)

                                                         ccGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa                                           >  2:1744162/1‑100 (MQ=255)

                                                             ttCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt                                       >  2:1599595/1‑100 (MQ=255)

                                                              accatcgccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCtt                                      >  2:368222‑M2/37‑100 (MQ=255)

                                                               cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                                     <  2:539689/100‑1 (MQ=255)

                                                               cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                                     >  2:2942970/1‑100 (MQ=255)

                                                               cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                                     >  1:472203/1‑100 (MQ=255)

                                                               cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAGGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGc                                        <  1:1058139/97‑1 (MQ=255)

                                                                gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGGCTTATCATGCCTACTGGGAGCACGCTTTa                                    >  2:3347183/1‑100 (MQ=255)

                                                                 tAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac                                   <  2:371559/100‑1 (MQ=255)

                                                                  aGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca                                  >  1:2279954/1‑100 (MQ=255)

                                                                  aGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca                                  >  2:2416857/1‑100 (MQ=255)

                                                                    gccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc                                >  1:59968‑M2/31‑100 (MQ=255)

                                                                      CGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgg                              >  2:378186‑M1/1‑100 (MQ=255)

                                                                       GGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTTCCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCggg                             >  2:2263966‑M1/1‑100 (MQ=255)

                                                                       GGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTCCCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAccgtg                             >  2:2264255‑M1/1‑98 (MQ=255)

                                                                       GGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCggg                             <  2:2713214‑M1/100‑1 (MQ=255)

                                                                        GATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgggg                            >  2:2306188‑M1/1‑100 (MQ=255)

                                                                           aaGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGaa                         <  2:73257/100‑1 (MQ=255)

                                                                            aGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGaaa                        <  2:661764/100‑1 (MQ=255)

                                                                             ggCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAc                       >  1:62224/1‑100 (MQ=255)

                                                                              gcgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAcc                      >  1:830577/1‑100 (MQ=255)

                                                                              gcgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAcc                      >  2:367015/1‑100 (MQ=255)

                                                                               cgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa                     >  1:1455677/1‑100 (MQ=255)

                                                                                 ccatcgccggATGCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATg                   >  1:1605735/5‑100 (MQ=38)

                                                                                 cTCGCGCCGCATCCGGAGATGGTGCACTGAAGCCTGTTGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATg                   <  2:2313743/100‑1 (MQ=255)

                                                                                       ccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgacc             <  1:3259498/100‑1 (MQ=255)

                                                                                        cgcATCCGGCGATGGTGCACTAAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccg            >  1:1780385/1‑100 (MQ=255)

                                                                                         gcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccga           <  1:1152370/100‑1 (MQ=255)

                                                                                           atccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACgaccgacc         <  1:1878450‑M2/93‑1 (MQ=255)

                                                                                              cggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAac      >  1:1258674‑M2/5‑100 (MQ=255)

                                                                                               ggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCa        >  1:474717‑M2/4‑97 (MQ=255)

                                                                                                 cGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACAcc   <  1:2417658‑M2/99‑1 (MQ=255)

                                                                                                 cGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACAcc   <  1:210369‑M2/99‑1 (MQ=255)

AAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACCA  >  NC_000913/4450880‑4451077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.