New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 431035NA (NA)3 (0.030) 3/166 NT NA noncoding (68/98 nt) REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 431065 NA (NA)noncoding (98/98 nt) REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 159 total aligned reads displayed.

TTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCA  >  NC_000913/430966‑431164
                                                                                                   |                                                                                                   
ttGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGC                                                                                                     <  1:3340322‑M1/100‑1 (MQ=255)
  gCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCAt                                                                                                   <  2:2536979/100‑1 (MQ=255)
    cTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGa                                                                                                 <  1:2413032/100‑1 (MQ=255)
      gATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAAc                                                                                               >  1:1169095/1‑100 (MQ=255)
       aTGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACa                                                                                              <  1:2735744/100‑1 (MQ=255)
         gcgcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACaaa                                                                                            >  2:2776807/1‑100 (MQ=255)
          cgcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAg                                                                                           >  1:1345321/1‑100 (MQ=255)
          cgcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAg                                                                                           >  2:1829557/1‑100 (MQ=255)
          cgcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAg                                                                                           <  2:2567168/100‑1 (MQ=255)
            cTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGca                                                                                         >  1:1283038/1‑100 (MQ=255)
               cGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCacac                                                                                      >  1:1621709/1‑100 (MQ=255)
                gCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACg                                                                                     >  1:1404583/1‑100 (MQ=255)
                gCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACg                                                                                     >  2:626011/1‑100 (MQ=255)
                 cTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgt                                                                                    >  2:273384/1‑100 (MQ=255)
                 cTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgt                                                                                    >  1:2263678/1‑100 (MQ=255)
                  ttATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgtt                                                                                   <  1:1357017/100‑1 (MQ=255)
                   tATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgtt                                                                                   >  1:958400/1‑99 (MQ=255)
                     tCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgtt                                                                                >  2:1312888/1‑100 (MQ=255)
                     tCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgtt                                                                                <  2:2473545/100‑1 (MQ=255)
                     cgatctcTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgtt                                                                                <  2:874001/94‑1 (MQ=255)
                     cgatctcTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgtt                                                                                <  2:874139/94‑1 (MQ=255)
                      cAGGCCTGCGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTa                                                                               <  1:298006/100‑1 (MQ=255)
                      cAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTa                                                                               <  1:1405342/100‑1 (MQ=255)
                         gCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACa                                                                            <  2:1404588/100‑1 (MQ=255)
                         gCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACa                                                                            >  1:387322/1‑100 (MQ=255)
                         gCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACa                                                                            <  2:1861237/100‑1 (MQ=255)
                          ccTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACaa                                                                           <  1:1215218/100‑1 (MQ=255)
                           cTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTagatcg                                                                          >  1:874137/1‑95 (MQ=255)
                             aCGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCATACGTTGTTAACAATCa                                                                        >  1:3063626/1‑100 (MQ=255)
                             aCGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCa                                                                        >  1:3060784/1‑100 (MQ=255)
                              cGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAg                                                                       >  2:2036031/1‑100 (MQ=255)
                              cGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAg                                                                       <  2:157012/100‑1 (MQ=255)
                               gTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGa                                                                      <  2:3066139/100‑1 (MQ=255)
                                ttATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGaa                                                                     <  1:2116514/100‑1 (MQ=255)
                                     tCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGcc                                                                <  1:1892084/100‑1 (MQ=255)
                                     tCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGcc                                                                >  2:1382091/1‑100 (MQ=255)
                                     tCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGcc                                                                >  2:631060/1‑100 (MQ=255)
                                        gCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCggg                                                             >  1:1035700/1‑100 (MQ=255)
                                        gCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCggg                                                             <  1:668489/100‑1 (MQ=255)
                                        gCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCggg                                                             >  1:1700541/1‑100 (MQ=255)
                                           atatatTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGaan                                                          <  2:3194927/100‑2 (MQ=255)
                                            tatatTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATa                                                         <  2:3122130/100‑1 (MQ=255)
                                               atTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAt                                                      >  1:590661/1‑100 (MQ=255)
                                                ttGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATc                                                     <  2:1191345/100‑1 (MQ=255)
                                                ttGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATc                                                     >  2:2083267/1‑100 (MQ=255)
                                                ttGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATc                                                     >  2:3087818/1‑100 (MQ=255)
                                                ttGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATc                                                     >  2:1014281/1‑100 (MQ=255)
                                                 tGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATcc                                                    >  2:2892491/1‑100 (MQ=255)
                                                   aaTTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCg                                                  <  1:1781144/100‑1 (MQ=255)
                                                    aTTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCgg                                                 >  1:2540105/1‑100 (MQ=255)
                                                    aTTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCgg                                                 >  1:2363842/1‑100 (MQ=255)
                                                          gTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAtttt                                           <  2:2108365/100‑1 (MQ=255)
                                                           tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTc                                          <  2:1706836/100‑1 (MQ=255)
                                                             cTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTc                                          <  1:1025134/98‑1 (MQ=255)
                                                               tttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATan                                      <  1:575177/100‑2 (MQ=255)
                                                               tttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATaa                                      <  2:2676795/100‑1 (MQ=255)
                                                               tttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATaa                                      >  1:409459/1‑100 (MQ=255)
                                                               tttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATaa                                      >  1:2661326/1‑100 (MQ=255)
                                                                 tgttgGCCGGACAAAGCGTTTACGCCGCATCCGGCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatca                                    <  2:365166‑M2/100‑66 (MQ=255)
                                                                 tgtagGCCGGATAAGGCGTTCACGCCGCATCCGGCctacaaaatcgcttaaattcaatatattgcaccatcctcgtaggcctgataagcgtagcgcatca                                    >  2:2495163‑M1/1‑35 (MQ=255)
                                                                  gttgGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa                                   <  1:1952525/100‑1 (MQ=255)
                                                                  gttgGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa                                   >  2:3141493/1‑100 (MQ=255)
                                                                  gttgGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa                                   >  2:1282624/1‑100 (MQ=255)
                                                                   ttgGCCGGACAAAGCGTTTACGCCGCATCCGGCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatcagg                                  <  1:3245388‑M2/100‑68 (MQ=255)
                                                                     ggCCGGATAAGGCGTTCACGCCGCATCCGGCctacaaaatcgcttaaattcaatatattgcaccatcctcgtaggcctgataagcgtagcgcatcaggca                                >  1:993474‑M1/1‑31 (MQ=255)
                                                                     ggCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa                                >  1:2419091/1‑100 (MQ=255)
                                                                     ggCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa                                >  2:758758/1‑100 (MQ=255)
                                                                      gCCGGATAAGGCGTTCACGCCGCATCCGGCctacaaaatcgcttaaattcaatatattgcaccatcctcgtaggcctgataagcgtagcgcatcaggcaa                               >  1:2294953‑M1/1‑30 (MQ=255)
                                                                      gCCGGATAAGGCGTTCACGCCGCATCCGGCctacaaaatcgcttaaattcaatatattgcaccatcctcgtaggcctgataagcgtagcgcatcaggcaa                               >  1:2516914‑M1/1‑30 (MQ=255)
                                                                      gCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg                               <  2:1957909/100‑1 (MQ=255)
                                                                       ccGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt                              >  1:2648849/1‑100 (MQ=255)
                                                                       ccGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt                              <  2:2308529/100‑1 (MQ=255)
                                                                        cGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt                             <  2:642282/100‑1 (MQ=255)
                                                                           aCAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTa                          <  2:1488754/100‑1 (MQ=255)
                                                                            cAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa                         >  2:942035/1‑100 (MQ=255)
                                                                             aaaGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc                        >  1:1121179/1‑100 (MQ=255)
                                                                             aaaGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc                        <  2:2833590/100‑1 (MQ=255)
                                                                             aaaGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc                        >  2:1741465/1‑100 (MQ=255)
                                                                                 cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctac                    <  1:273384/100‑1 (MQ=255)
                                                                                 cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctac                    <  1:1473576/100‑1 (MQ=255)
                                                                                 cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctac                    <  2:1621715/100‑1 (MQ=255)
                                                                                  gTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctact                   >  1:93956/1‑100 (MQ=255)
                                                                                   tttACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctacta                  >  2:3150453/1‑100 (MQ=255)
                                                                                       cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAg              >  1:1132510/1‑100 (MQ=255)
                                                                                        gccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg             <  2:1579228/100‑1 (MQ=255)
                                                                                        gccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg             >  1:788842/1‑100 (MQ=255)
                                                                                        gccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg             >  2:2952257/1‑100 (MQ=255)
                                                                                         ccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt            >  1:260268/1‑100 (MQ=255)
                                                                                            cATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAac         <  2:2342409/100‑1 (MQ=255)
                                                                                              tCCGGCcaacaaaagcacgtaaattcaatatattgctgcaataacgtaggcctgataatcgtagcgcatcaggcaattttacgttttaatcacttcttct       >  1:1828982‑M2/1‑6 (MQ=255)
                                                                                              tCCGGCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatcaggcaattttacgttttaatcacttcttct       <  2:481115‑M2/100‑95 (MQ=255)
                                                                                              tCCGGCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatcaggcaattttacgttttaatcacttcttct       >  2:2215713‑M2/1‑6 (MQ=255)
                                                                                               ccGGCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatcaggcaattttacgttttaatcacttcttctt      >  2:2097959‑M2/1‑5 (MQ=255)
                                                                                                cGGCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatcaggcaattttacgttttcatcacttcttcttg     <  1:3162783‑M2/100‑97 (MQ=255)
                                                                                                 ggCcaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgataagcgtagcgcatcaggcaattttacgttttaatcacttcttcttgt    >  1:642282‑M2/1‑3 (MQ=255)
                                                                                                 ggCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAaccac      >  1:1763292/1‑98 (MQ=255)
                                                                                                  gCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAcccc   <  1:1965276/100‑1 (MQ=255)
                                                                                                  gCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAcccc   <  2:1035703/100‑1 (MQ=255)
                                                                                                  gCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAcccc   <  2:802908/100‑1 (MQ=255)
                                                                                                   cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCa  >  2:2988532/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCA  >  NC_000913/430966‑431164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.