New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	526259 =	NA (NA)	6 (0.050)	5/168	NT	100%	coding (2999/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	526275 =	0 (0.000)					coding (3015/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526176‑526374                                                                                                    |                                                                                                    tccgatctgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  2:1028706‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  2:1728696‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  2:1027974‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:2856650‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:690170‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:50208‑M2/1‑1 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  2:1463823‑M2/2‑1 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgcgagacccgttttgccattcgccttcccatcttgtcgtagaggtagcggctctCGa                                                                                                   >  1:276002‑M2/97‑99 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  2:769710‑M2/97‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  <  2:2409248‑M2/4‑1 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  <  2:2284053‑M2/4‑1 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  1:1710837‑M2/97‑100 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcgcgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1268073‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 >  2:3173315‑M2/96‑100 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1547419‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:2162801‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:1452089‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 >  1:1572334‑M2/96‑100 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1549940‑M2/5‑1 (MQ=255)         gacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctcagatcgga                                                                                             >  1:1028703‑M2/92‑92 (MQ=255)                                                     ccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGACCCCCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGAcc                                                 >  1:2389286‑M2/48‑100 (MQ=255)                                                                    ccgtcccagcgggtcgtagaggtagcggctctCGACCCGCTGGGACAGCGAATGGCAAAACGGGTCGGGCGGCGGGAGCGTGACCTGACGGGGAGGAcgt                                  >  1:584138‑M2/33‑100 (MQ=255)                                                                          cagcgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgt                            >  1:740320‑M2/27‑100 (MQ=255)                                                                             cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  2:1276998‑M2/24‑100 (MQ=255)                                                                             cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  2:2693300‑M2/24‑100 (MQ=255)                                                                              ggtcgtagaggtagcggctctaCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTcgcg                        >  2:1776908‑M2/23‑100 (MQ=255)                                                                                                    CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGGCGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  <  2:25158‑M2/100‑1 (MQ=255)                                                                                                    CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  <  1:287080‑M2/100‑1 (MQ=255)                                                                                                    |                                                                                                    CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526176‑526374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.