BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	39151 =	NA (NA)	3 (0.030)	3/164	NT	NA	noncoding (1/82 nt)	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	39181 =	NA (NA)	3 (0.030)	3/164	NT	NA	noncoding (31/82 nt)	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 146 total aligned reads displayed.

ACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTC  >  NC_000913/39082‑39280

cgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGcc                                                                                                     >  1:3026864‑M1/70‑100 (MQ=255)

 gctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgactgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCt                                                                                                    >  1:1797288‑M1/69‑100 (MQ=255)

  ggCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTa                                                                                                   >  2:493840/1‑100 (MQ=255)

     ccGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACAt                                                                                                <  1:2212057/100‑1 (MQ=255)

      cGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACAtt                                                                                               <  2:192338/100‑1 (MQ=255)

         aTTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCg                                                                                             <  1:1636690/99‑1 (MQ=255)

         aTTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGt                                                                                            <  2:1063608/100‑1 (MQ=255)

           ttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGc                                                                                          <  1:1313004/100‑1 (MQ=255)

             cGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTc                                                                                        >  1:2021937/1‑100 (MQ=255)

             cGGAATGGGTAGATGATCCATTATTTGATCCTGAAAAATTTATGTAGCGCATGAATGCCGGATGCGGCGTCAACACTTTATACGGTATACCTTCGTGc                                                                                          >  1:2656267/1‑98 (MQ=255)

              ggCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTcc                                                                                       <  1:2847813/100‑1 (MQ=255)

              ggCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCACATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTcc                                                                                       <  2:1605459/100‑1 (MQ=255)

               gCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTccc                                                                                      >  1:1043714/1‑100 (MQ=255)

               gCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTccc                                                                                      >  2:192705/1‑100 (MQ=255)

                cATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCg                                                                                     <  1:864488/100‑1 (MQ=255)

                 aTGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGt                                                                                    >  1:667159/1‑100 (MQ=255)

                  tGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTa                                                                                   >  1:2247371/1‑100 (MQ=255)

                    ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg                                                                                 <  2:1082895/100‑1 (MQ=255)

                    ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg                                                                                 >  1:1870037/1‑100 (MQ=255)

                        gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTg                                                                             >  1:1691015/1‑100 (MQ=255)

                        gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTg                                                                             >  2:553730/1‑100 (MQ=255)

                        gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTg                                                                             <  2:1696376/100‑1 (MQ=255)

                        gatgagCCATTATTTGCCCCTGAAAAATTGATGTAGCGCATGACTGCCGGAGGCGGCGTAAACGCTTTAGCCGGCCTACATTCGTGCTCCCGTAGGCCTg                                                                             <  2:3003563/100‑1 (MQ=255)

                         atgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGa                                                                            <  1:471215/100‑1 (MQ=255)

                          tgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGAt                                                                           <  2:1290699/100‑1 (MQ=255)

                          tgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGAt                                                                           <  1:2402643/100‑1 (MQ=255)

                            atCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATaa                                                                         >  2:1710602/1‑100 (MQ=255)

                             tCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAg                                                                        <  1:390278/100‑1 (MQ=255)

                             tCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAg                                                                        >  2:1191073/1‑100 (MQ=255)

                             tCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAg                                                                        >  1:1738689/1‑100 (MQ=255)

                              ccATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGa                                                                       >  1:732366/1‑100 (MQ=255)

                               cATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc                                                                      >  1:1190787/1‑100 (MQ=255)

                               cATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc                                                                      >  1:303468/1‑100 (MQ=255)

                                attattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACg                                                                     >  1:1352995/1‑100 (MQ=255)

                                attattTGCTCCTGAAAAATTTATGTAGCACATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACg                                                                     <  1:2197826/100‑1 (MQ=255)

                                 ttattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGc                                                                    <  1:1010911/100‑1 (MQ=255)

                                 ttattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGc                                                                    <  2:2671396/100‑1 (MQ=255)

                                  tattTGCTCCTGAAAAATTTATGTATCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGc                                                                    <  1:1065507/99‑1 (MQ=255)

                                  tattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc                                                                      <  1:633997/97‑1 (MQ=255)

                                  tattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCa                                                                   >  1:3203968/1‑100 (MQ=255)

                                   attTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCAt                                                                  >  1:1602137/1‑100 (MQ=255)

                                   attTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCAt                                                                  >  2:574046/1‑100 (MQ=255)

                                   attTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCAt                                                                  <  2:3261832/100‑1 (MQ=255)

                                        cTCCTGAAAAATTTATGTAGCGCATGACTTCCTGATTCTGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCg                                                             <  2:685164/100‑1 (MQ=37)

                                            tGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCg                                                          <  1:759706/99‑1 (MQ=255)

                                             gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCa                                                        >  1:2048857/1‑100 (MQ=255)

                                             gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGCAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAACGTCGCa                                                        >  1:1800646/1‑100 (MQ=255)

                                              aaaaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCAt                                                       >  2:2286335/1‑100 (MQ=255)

                                               aaaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATc                                                      >  1:1094472/1‑100 (MQ=255)

                                                aaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCa                                                     >  1:2891804/1‑100 (MQ=255)

                                                     tATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAg                                                <  1:322947/100‑1 (MQ=255)

                                                        gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACCTTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc                                             <  1:1159256/100‑1 (MQ=255)

                                                        gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc                                             >  1:1659275/1‑100 (MQ=255)

                                                         tAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCa                                            <  2:1514250/100‑1 (MQ=255)

                                                         tAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCa                                            <  2:683630/100‑1 (MQ=255)

                                                             gcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGa                                        <  1:903589/100‑1 (MQ=255)

                                                             gcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGa                                        >  2:1245739/1‑100 (MQ=255)

                                                              cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc                                       >  2:1625208/1‑100 (MQ=255)

                                                               aTGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACt                                      <  2:1145309/100‑1 (MQ=255)

                                                               aTGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACt                                      <  1:1099094/100‑1 (MQ=255)

                                                               aTGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACt                                      <  1:500083/100‑1 (MQ=255)

                                                                tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt                                     <  1:1503356/100‑1 (MQ=255)

                                                                 gACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCACCAGGCAGCGCACGGACTTa                                    >  1:1481896/1‑100 (MQ=255)

                                                                  aCTGCCGGATGTGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTan                                   <  1:1612307/100‑2 (MQ=255)

                                                                  aCTGCCGGATGCGGCGTAAACGCTTTATCCGGCGTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGGATCAGGCAGCGCACGGACTTAg                                   <  1:1951522/100‑1 (MQ=255)

                                                                   cTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc                                  >  2:1420995/1‑100 (MQ=255)

                                                                    tGCCGGATGCGGCGTAAACGCTTTATCTGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCg                                 <  2:585801/100‑1 (MQ=255)

                                                                     gccggataaagcgtttacgccgcatccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg                                >  1:2630191‑M2/31‑100 (MQ=255)

                                                                     GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg                                <  1:2361209‑M1/100‑1 (MQ=255)

                                                                     GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg                                >  2:1870049‑M1/1‑100 (MQ=255)

                                                                     GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg                                <  2:2490684‑M1/100‑1 (MQ=255)

                                                                      CCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGt                               >  2:2891830‑M1/1‑100 (MQ=255)

                                                                        GGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTAt                             <  1:349865‑M1/100‑1 (MQ=255)

                                                                           TGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGc                          >  2:414421‑M1/1‑100 (MQ=255)

                                                                            gcggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTCGGCCTGATAAGACGCATCAGCGTCGCACCAGGCAGCGCACGGACTTAGCGGTATCGCt                         <  1:2762613/100‑1 (MQ=255)

                                                                              ggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTc                       <  2:3069315/100‑1 (MQ=255)

                                                                               gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa                      >  2:1540987/1‑100 (MQ=255)

                                                                               gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa                      <  1:2903093/100‑1 (MQ=255)

                                                                               gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa                      <  2:2484243/100‑1 (MQ=255)

                                                                               gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa                      <  1:406792/100‑1 (MQ=255)

                                                                               gcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCa                      <  2:2877252/100‑1 (MQ=255)

                                                                                cgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg                     >  1:3324173/1‑100 (MQ=255)

                                                                                  tAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCa                   >  1:1927484/1‑100 (MQ=255)

                                                                                  tAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCa                   >  2:2659612/1‑100 (MQ=255)

                                                                                   aaaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAc                  <  2:1993370/100‑1 (MQ=255)

                                                                                   aaaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAc                  <  2:523758/100‑1 (MQ=255)

                                                                                   aaaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAc                  >  1:3060764/1‑100 (MQ=255)

                                                                                     aCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCg                >  2:1341329/1‑100 (MQ=255)

                                                                                      cGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGc               <  2:3203994/100‑1 (MQ=255)

                                                                                      cGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGc               >  2:2160698/1‑100 (MQ=255)

                                                                                        cTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCAc             >  2:404512/1‑100 (MQ=255)

                                                                                        cTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCAc             >  2:1875797/1‑100 (MQ=255)

                                                                                            atccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAcc         >  2:3183855‑M2/8‑100 (MQ=255)

                                                                                             tccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAccc        <  2:1447015‑M2/94‑1 (MQ=255)

                                                                                              ccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCa       >  1:994320‑M2/6‑100 (MQ=255)

                                                                                                 gcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCg    <  2:1352999‑M2/98‑1 (MQ=255)

                                                                                                  cCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGt   >  2:3189547‑M2/2‑100 (MQ=255)

                                                                                                  cCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGt   >  2:1227826‑M2/2‑100 (MQ=255)

                                                                                                   cTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTc  >  1:303767/1‑100 (MQ=255)

                                                                                                   cTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTc  <  1:3026052/100‑1 (MQ=255)

ACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTC  >  NC_000913/39082‑39280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.