| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,115,627 | C→T | 100% | intergenic (‑137/+35) | mdtG ← / ← lpxL | putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,115,627 | 0 | C | T | 99.2% | 423.4 / ‑4.7 | 119 | intergenic (‑137/+35) | mdtG/lpxL | putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (55/63); total (55/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
AAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACT > NC_000913/1115531‑1115723 | aagaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCgg > 2:1909033/1‑100 (MQ=255) agaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGa < 2:710528/100‑1 (MQ=255) aaaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATg > 2:1993547/1‑100 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGc > 2:2468263/1‑100 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGc < 2:516057/100‑1 (MQ=255) aaaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGc < 2:3121497/100‑1 (MQ=255) aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGcc > 1:2625490/1‑100 (MQ=255) aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGcc < 2:2059157/100‑1 (MQ=255) gATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCAt > 1:362615/1‑100 (MQ=255) gATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCAt < 1:1902117/100‑1 (MQ=255) tAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCTAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTc < 1:3215388/100‑1 (MQ=255) tAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTc < 2:2640879/100‑1 (MQ=255) aGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTg > 1:1252544/1‑100 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 2:79314/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 2:2618923/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 2:1422225/100‑1 (MQ=255) acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAg < 1:267363/100‑1 (MQ=255) aaTTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATcc > 1:2873372/1‑100 (MQ=255) aaTTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATcc > 1:493845/1‑100 (MQ=255) gatctcccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCa < 1:896102/95‑1 (MQ=255) aTGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCa < 2:2305222/100‑1 (MQ=255) tGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCAt < 2:2571947/100‑1 (MQ=255) gcgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATg < 2:165179/100‑1 (MQ=255) gcgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATg < 2:2657321/100‑1 (MQ=255) cgcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATgg < 2:452290/100‑1 (MQ=255) gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATggg > 1:1752606/1‑100 (MQ=255) gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATggg < 1:794475/100‑1 (MQ=255) cccGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCaagatc > 2:896105/1‑95 (MQ=255) cGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGgaga < 2:1598447/100‑1 (MQ=255) gACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGAt < 2:1056457/100‑1 (MQ=255) gACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGGGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGgaga > 1:1500434/1‑99 (MQ=255) cTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGAttt > 1:1448105/1‑100 (MQ=255) ttCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTa < 2:2521595/100‑1 (MQ=255) tCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTaa < 1:2505395/100‑1 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt < 1:3311085/100‑1 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt < 1:290180/100‑1 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt > 1:1148958/1‑100 (MQ=255) ccAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt < 2:1239727/100‑1 (MQ=255) caggggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAAt > 2:2702666/4‑100 (MQ=255) cAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATa > 2:470759/1‑100 (MQ=255) cAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATa > 2:923603/1‑100 (MQ=255) cAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATa < 1:1607087/100‑1 (MQ=255) gggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGc < 2:919654/100‑1 (MQ=255) ggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCg < 2:2764657/100‑1 (MQ=255) ggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCg > 1:47554/1‑100 (MQ=255) cgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGCTTTAATAGCGTGaa > 1:135081/1‑100 (MQ=255) cgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGaa > 2:1277845/1‑100 (MQ=255) gcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAg > 1:513275/1‑100 (MQ=255) cAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAgg < 2:221772/100‑1 (MQ=255) aaTCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGa > 2:1218794/1‑100 (MQ=255) aaTCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGa < 2:3132341/100‑1 (MQ=255) tCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAAc > 2:2998966/1‑100 (MQ=255) ccAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACg < 1:2431873/100‑1 (MQ=255) ccAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATAGGAGATTTAATAGCGTGAAGGAACg > 1:648768/1‑100 (MQ=255) cAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGc > 1:1960045/1‑100 (MQ=255) gCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCg > 2:1128867/1‑100 (MQ=255) gCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCg > 2:1107304/1‑100 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 2:3275469/100‑1 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg > 1:3123222/1‑100 (MQ=255) ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 2:637088/100‑1 (MQ=255) cttccgatcTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCggg < 1:563435/92‑1 (MQ=255) tttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGc < 2:3287347/100‑1 (MQ=255) tttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGc > 2:2480465/1‑100 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATTGCGTGAAGGAACGCCTTCCGGGCgtg < 2:2040065/100‑1 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg < 2:2229542/100‑1 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg < 2:493845/100‑1 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg > 2:2311929/1‑100 (MQ=255) aTCGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg > 2:184386/1‑100 (MQ=255) cGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt > 2:3285964/1‑100 (MQ=255) cGCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt < 1:2311912/100‑1 (MQ=255) gCTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt > 2:1652417/1‑100 (MQ=255) cTAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtttt < 1:1993533/100‑1 (MQ=255) tAAATCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtttt < 2:3191627/99‑1 (MQ=255) tAAAGCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATGCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttttn < 1:583312/100‑2 (MQ=255) aaaTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaa > 1:2021516/1‑100 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 2:2827679/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 2:777925/100‑1 (MQ=255) aTCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAg < 2:508433/100‑1 (MQ=255) tCAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGc < 1:3018441/100‑1 (MQ=255) cAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCg > 1:114190/1‑100 (MQ=255) cAGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTCAAAGCg > 2:692369/1‑100 (MQ=255) aGGGGGATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGa > 2:837565/1‑100 (MQ=255) gggggATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTGATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGAc < 2:231364/100‑1 (MQ=255) gggATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACgg < 1:1107301/100‑1 (MQ=255) gggATTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACgg > 2:1147053/1‑100 (MQ=255) aTTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtgt > 2:750584/1‑100 (MQ=255) aTTTGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtg > 1:745418/1‑99 (MQ=255) tttGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTa < 2:1252548/100‑1 (MQ=255) tttGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTa > 2:180804/1‑100 (MQ=255) tttGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTa < 2:2834706/100‑1 (MQ=255) tttGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGgtgt < 1:1334098/99‑1 (MQ=255) tGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAc > 2:1029756/1‑100 (MQ=255) tGCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAc > 2:3053103/1‑100 (MQ=255) tGCTGTGGTAATGTCGGATGCAATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAc > 1:137218/1‑100 (MQ=255) gCTGTGGTAATGTCGGATGCGATTCTGAAGCACCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAcc < 1:824478/100‑1 (MQ=255) gCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAcc < 1:161140/100‑1 (MQ=255) gCTGTGGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAAcc < 2:3316293/100‑1 (MQ=255) gtgGTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca < 2:1498988/100‑1 (MQ=255) gTAATGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACatat > 1:2692812/1‑100 (MQ=255) aaTGTCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATAc > 2:2702471/1‑100 (MQ=255) | AAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAAGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACT > NC_000913/1115531‑1115723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |