| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,792,242:1 | +A | 16.4% | intergenic (‑222/+25) | ydiV ← / ← nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,792,242 | 1 | . | A | 16.4% | 398.6 / 86.2 | 122 | intergenic (‑222/+25) | ydiV/nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| Reads supporting (aligned to +/- strand): ref base . (56/46); new base A (9/11); total (65/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.14e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
CCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGC > NC_000913/1792143‑1792340 | ccTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTat > 2:3255438/1‑100 (MQ=255) cTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTat‑c > 2:1669047/1‑100 (MQ=255) tttttttAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGCCGATGTat‑ca > 1:2445762/1‑100 (MQ=255) ttttttAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTat‑cat > 1:2495032/1‑100 (MQ=255) tttttAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTat‑catc < 2:2868191/100‑1 (MQ=255) ttttAGATTATTCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCg < 1:649401/100‑1 (MQ=255) ttttAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCg < 2:2786930/100‑1 (MQ=255) tAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGGCTGCAAAATACTACTGTATTCAGGATTAAATGTACGTCGACGTAT‑CATCGCCg < 1:1310971/100‑1 (MQ=255) aGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGt > 2:1889634/1‑100 (MQ=255) aGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGt > 2:3255075/1‑100 (MQ=255) aGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGATA‑CATCGCCGt < 1:947569/100‑1 (MQ=39) aGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGt < 2:3570963/100‑1 (MQ=39) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTc < 2:2561662/100‑1 (MQ=255) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGATA‑CATCGCCGTc < 1:1071614/100‑1 (MQ=255) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGATA‑CATCGCCGTc < 1:953752/100‑1 (MQ=255) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTc < 2:3154183/100‑1 (MQ=39) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTc < 2:844668/100‑1 (MQ=39) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTc < 2:587097/100‑1 (MQ=39) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTc < 1:890999/100‑1 (MQ=39) gATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTc < 1:890987/100‑1 (MQ=39) aTTATCCTTATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTcc < 1:1371615/100‑1 (MQ=38) ttATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTCCa < 2:2694168/100‑1 (MQ=38) ttATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTCCa < 1:3073009/100‑1 (MQ=38) ttATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATCGACGGCGATGTAT‑CATCGCGGTc > 1:2408426/1‑98 (MQ=255) ccTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCAtttt > 1:2948500/1‑100 (MQ=255) ccTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCAtttt > 2:3680533/1‑100 (MQ=255) ttATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGAc < 2:1615453/100‑1 (MQ=255) ttATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGAc < 2:391720/100‑1 (MQ=255) taAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTCCAtttactcctgaa > 1:3572134/1‑91 (MQ=25) aaaCGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATG‑ATACATCGCCGTCCAtttactcctgaat < 2:3572162/100‑11 (MQ=21) aaCGAATAATCCATTTCCGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAATTGATCGCCGATGTAT‑CATCGCTGACCATTTTTAGACATACt > 1:2859554/1‑100 (MQ=255) aaCGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACt < 1:1780116/100‑1 (MQ=255) cGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACGTACTAg < 2:1594091/100‑1 (MQ=255) cGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAg < 2:3584229/100‑1 (MQ=255) aataatCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGAt < 1:3585792/100‑1 (MQ=255) aataatCCATTAACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGAt > 1:1958549/1‑100 (MQ=255) ataatCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGAt < 1:3346232/99‑1 (MQ=255) ccATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGtct > 2:3486147/1‑100 (MQ=255) ccATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGtct > 1:2984741/1‑100 (MQ=255) ttACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGcc < 1:2244383/100‑1 (MQ=255) aCGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTg > 2:574643/1‑100 (MQ=255) cGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTAGACATAATAGATTAGTCTCTCCTGc > 1:660782/1‑100 (MQ=255) ggAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGTAAGGCGATGTAT‑CATCGCCGTACATTTTTCGAGATACTAGATTAGTGTTGcc > 1:3213949/1‑96 (MQ=255) ggAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGcc < 2:2478363/100‑1 (MQ=255) gAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCa > 1:3098303/1‑100 (MQ=255) gAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCa > 2:2573614/1‑100 (MQ=255) aTTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGa < 2:84508/100‑1 (MQ=255) ttttGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGaaa < 2:2300165/100‑1 (MQ=255) ttGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAAtt < 1:1901443/100‑1 (MQ=255) tCTGCAAGATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAAttt > 2:1954484/1‑98 (MQ=255) tCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAAttttt < 2:1018940/100‑1 (MQ=255) cTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTc > 1:2052342/1‑100 (MQ=255) tGCAAAATACTCCTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGCCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTc < 2:1677751/99‑1 (MQ=255) tGCAAAATACTACTGTATTCAGGAGTAAATGGACTGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCt > 1:2461919/1‑100 (MQ=255) tGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCt > 2:101436/1‑100 (MQ=255) tGCAAAATACTACTGTATTCAGGAGTAAATGGAAGGCGATGTAT‑CATCGACGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAACTTTTTCt > 1:2984923/1‑100 (MQ=255) gCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTg > 1:2409729/1‑100 (MQ=255) gCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTg > 2:1053010/1‑100 (MQ=255) cAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGc > 2:2141230/1‑100 (MQ=255) tactGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGAc < 2:1767668/100‑1 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATCCTAGATTCGTCTCGCCTGCAAGAAATTTTTCTGCCAATAGACa > 1:570802/1‑100 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGAc > 1:1073869/1‑99 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACa > 2:913127/1‑100 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACa < 1:311685/100‑1 (MQ=255) actGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACa < 1:1056828/100‑1 (MQ=255) gTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTa > 2:928193/1‑100 (MQ=255) ttCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTTGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCa < 2:2636856/100‑1 (MQ=255) cAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAg < 2:707330/100‑1 (MQ=255) tccgatcttGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTg < 2:1210713/92‑1 (MQ=255) ggAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTCTCAAGTg > 1:1090647/1‑100 (MQ=255) ggAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTg > 1:3268712/1‑100 (MQ=255) ggAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTg < 1:1538671/100‑1 (MQ=255) ggAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATATTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTg > 2:2635050/1‑100 (MQ=255) gAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGa > 2:1336386/1‑100 (MQ=255) gAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGa > 2:2260619/1‑100 (MQ=255) cgaaaaaTGGACGGCGATGATA‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACCTTATCAAGTGa > 1:1203772/5‑100 (MQ=37) aGTAAATTGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAg < 2:158970/100‑1 (MQ=255) gTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAgg < 2:1313562/100‑1 (MQ=255) gTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAgg < 2:3336403/100‑1 (MQ=255) aaaTGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGaa > 1:2874417/1‑100 (MQ=255) aaaTGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAAATTTTCTGCCAATAGACATTATCAAGTGAGGaa > 2:3369624/1‑100 (MQ=255) aaTGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAAc < 1:1378658/100‑1 (MQ=255) tGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAgatcgga > 1:1210707/1‑94 (MQ=255) tGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGc > 2:1126331/1‑100 (MQ=255) ngACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCa > 1:1828843/2‑100 (MQ=255) ggACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCa < 1:1710286/100‑1 (MQ=255) ggACGGCGATG‑ATACATCGCCGTCCATTTTTTTTCTTTTTATATTCGTCTCGCCTGCCAGAAATTTTTCTCCCTTTAGACATTATCAAGTTACGAACGCa > 1:3409014/1‑100 (MQ=16) ggACGGCGATG‑ATACATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCa > 2:105738/1‑100 (MQ=39) gACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATGAAGTGAGGAACGCAt > 2:3667181/1‑100 (MQ=255) gACGGCGATGATA‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCAt > 1:1449578/1‑100 (MQ=39) gACGGCGATG‑ATACATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCAt > 2:905340/1‑100 (MQ=39) gACGGCGATG‑ATACATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATGTTTCTGCCAATAGACATTATCAAGTGAGGAACGCAt > 2:2626317/1‑100 (MQ=38) aCGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATc < 2:1573513/100‑1 (MQ=255) aCGGCGATG‑ATACATCGCCGTCCATTTTTCGACATACTGGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGAGAGGAACGCATc > 2:2182506/1‑100 (MQ=38) cGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCa < 1:3680505/100‑1 (MQ=255) cGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTc > 2:622742/1‑100 (MQ=255) tGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCt > 2:423600/1‑100 (MQ=255) tGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCt < 2:2874436/100‑1 (MQ=255) at‑catcGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGc < 2:1305746/100‑1 (MQ=255) t‑catcGTCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGc < 1:3022780/99‑1 (MQ=255) | CCTTTTTTTAGATTATCCTGATTATAAACGAATAATCCATTTACGGAATTTTTGTCTGCAAAATACTACTGTATTCAGGAGTAAATGGACGGCGATGTAT‑CATCGCCGTCCATTTTTCGACATACTAGATTCGTCTCGCCTGCCAGAAATTTTTCTGCCAATAGACATTATCAAGTGAGGAACGCATCACTCCCTTGC > NC_000913/1792143‑1792340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |