New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 227963 =NA (NA)11 (0.090) 11/168 NT NA noncoding (2205/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 227978 = NA (NA)noncoding (2220/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 123 total aligned reads displayed.

CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/228066‑227963
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  >  NC_000913/227978‑228076
                                                                                                                                                                                                            
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGGGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  2:1306954/1‑100
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  1:3667957/1‑100
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  1:394722/1‑100
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         <  1:1117378/100‑1
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  1:844906/1‑100
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         <  1:2793942/100‑1
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  2:136767/1‑100
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  1:2028214/1‑100
CCGACCAGGATTAGCCAACCTTCATGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTAC                                                                                                         >  1:1862160/1‑100
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        >  2:2056360/1‑100
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        <  2:1018636/100‑1
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        >  1:3090573/1‑100
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        <  2:1425118/100‑1
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        <  2:697724/100‑1
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        >  2:695971/1‑100
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        >  2:2789312/1‑100
 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGAAGACCGCCCCAGTCAAACTACCCACCAGAAACTGTCCGCAACCCG‑GATTACG                                                                                                        >  1:2721703/1‑100
 CGACCAAGATTAGCCGACCTTCGTGCTCCTCCGTCACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACG                                                                                                        <  1:1766983/100‑1
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTCCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       <  1:167271/100‑1
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGn                                                                                                       <  1:409929/100‑2
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       <  2:2451388/100‑1
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       <  2:2340977/100‑1
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       >  2:1720193/1‑100
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       >  1:1461167/1‑100
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       <  1:1775896/100‑1
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       >  2:3711759/1‑100
  GACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGG                                                                                                       >  1:121090/1‑100
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAACCTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  1:1996298/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  2:2690722/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  1:154487/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  1:802621/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  2:563703/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  1:3124287/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  2:418064/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  1:1351243/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  2:1473572/100‑1
   ACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACGACCCACCAGACACTGTCCGCAACCCG‑GATTACGGG                                                                                                      <  1:692097/100‑1
    CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT                                                                                                     >  2:1181566/1‑100
    CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT                                                                                                     >  1:583744/1‑100
    CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT                                                                                                     >  2:2696337/1‑100
    CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT                                                                                                     <  2:90052/100‑1
    CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT                                                                                                     >  1:1948461/1‑100
    CCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTATAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCGACCCG‑GATTACG                                                                                                        >  1:3148937/1‑97
    CCAGGATTAGCCAACCTTCGTGCTCCGCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT                                                                                                     >  2:2268629/1‑100
     CAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGTn                                                                                                    <  1:104466/100‑2
      AGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTG                                                                                                   <  2:559362/100‑1
       GGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTGCCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGC                                                                                                  <  1:985340/100‑1
       GGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGC                                                                                                  <  2:380156/100‑1
       GGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGC                                                                                                  <  2:2115830/100‑1
       GGATTAGCCAACCTTCATGCTCCTCCGTTACTCATTAGGAGGAGCCCGCCCCAGTCAAACTACCCACCAGACACAGTCCGCAACCCG‑GAGTACG                                                                                                        >  1:33503/1‑94
        GATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGTGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGC                                                                                                  <  1:348049/99‑1
        GATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCG                                                                                                 <  2:239014/100‑1
         ATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGTGA‑TCCGGGTTGCGG                                                                                                <  1:3293348/100‑1
         ATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGG                                                                                                <  1:1020913/100‑1
         ATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGG                                                                                                <  1:3468626/100‑1
         ATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGG                                                                                                <  2:571996/100‑1
          TTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TGATCCGGGTTGCGGA                                                                                               <  2:213139/100‑1
          TTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TGATCCGGGTTGCGGA                                                                                               <  2:1039752/100‑1
            AGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGTGA‑TCCGGGTTGCGGACA                                                                                             <  2:2156997/100‑1
               CAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGATACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGGACAGTG                                                                                          <  1:3396857/100‑1
               CAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGGACAGTG                                                                                          >  2:1881282/1‑100
                       GTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGGACAGTGTCTGGTGG                                                                                  <  1:1881272/100‑1
                                 GTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑TAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGAC                                                                        <  2:3663134/100‑1
                                                                                  GTCCGCAACCCG‑GATTACGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTCAAGAGGAACGGAAGAGCACGAAGGTTGGGTA                       >  1:1387191/1‑100
                                                                                     nGCAACCCG‑GATCACGGGTTGCGGACAGTGTCTGGTGGGTAGATTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATC                    >  1:1940859/2‑100
                                                                                      GCAACCCG‑GATCACGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCC                   >  1:1334310/1‑100
                                                                                      GCAACCCG‑GATCACGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCC                   >  1:83945/1‑100
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      <  1:2428112/100‑1
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      <  2:729865/100‑1
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      >  1:343873/1‑100
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      <  2:280237/100‑1
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      <  2:1811412/100‑1
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      >  1:2015020/1‑100
                                                                                                    CGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCA      <  2:1501401/100‑1
                                                                                                     GGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAG     <  2:2070337/100‑1
                                                                                                     GGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAG     <  2:1113607/100‑1
                                                                                                     GGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAG     <  1:2786734/100‑1
                                                                                                     GGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAG     <  1:3428273/100‑1
                                                                                                     GGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAG     <  1:1763067/100‑1
                                                                                                      GGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGG    <  1:379087/100‑1
                                                                                                      GGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGATGGCTAATCCTGGTCGGACATCAGG    >  1:3525576/1‑100
                                                                                                      GGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCAGTCTCCTCCTAAATAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAG     <  1:2238153/99‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGGGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  1:405998/100‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGn   <  1:1105970/100‑2
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   >  1:622406/1‑100
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   >  2:3221013/1‑100
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  2:3253431/100‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  2:3364500/100‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   >  1:1909458/1‑100
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  1:1187639/100‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  1:769927/100‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGGCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  2:1196862/100‑1
                                                                                                       GTTGCGGACAGTGTCTGGTGGGTAGTTTGACGGGGGCGGGCTACTCGTAAAGAGTAACGGAGCAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGA   <  1:3166332/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGATTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  <  2:583107/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  <  1:1274588/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  <  1:1307867/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  <  2:1675846/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  <  2:1789347/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  <  2:2253912/100‑1
                                                                                                        TTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGGAAGGGAGGAGCACGCAGGTTGGCTAATCCTGGTTGGACATCAGGAG  >  1:2786524/1‑100
                                                                                                                                                                                                            
CCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCG‑GATTACGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/228066‑227963
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAG  >  NC_000913/227978‑228076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.