| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3621000 | NA (NA) | 9 (0.070) | 7/166 | NT | 17.7% | coding (1809/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3621021 | 45 (0.340) | coding (1830/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
GACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAA > NC_000913/3620917‑3621099 | gACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGG > 2:72007‑M2/1‑100 (MQ=255)gACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGG > 1:1275135‑M2/1‑100 (MQ=255)gACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGG > 1:410643‑M2/1‑100 (MQ=255)gACAGCCGTAGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGG > 2:3098530‑M2/1‑100 (MQ=255) aCAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGA < 1:3403578‑M2/100‑1 (MQ=255) cAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAGACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGAC > 1:2945284‑M2/1‑100 (MQ=255) cAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATAGAACATCGCCGGTGGACTGACCGCCGGCATTGCCCCGGA < 2:1500369‑M2/99‑1 (MQ=255) cAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGAC > 1:1032466‑M2/1‑100 (MQ=255) cAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGAC > 2:213387‑M2/1‑100 (MQ=255) cAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGAC < 1:429519‑M2/100‑1 (MQ=255) cAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGAC < 1:2194890‑M2/100‑1 (MQ=255) cAGCCGTCGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGAC > 1:2496783‑M2/1‑100 (MQ=255) aGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACG > 1:1081980‑M2/1‑100 (MQ=255) aGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACG > 2:1483448‑M2/1‑100 (MQ=255) aGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACG > 1:1669923‑M2/1‑100 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 2:873005‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 2:512977‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 2:3120385‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 1:2197414‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 1:1797367‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 2:1451509‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 1:967442‑M2/100‑1 (MQ=255) gCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGG < 1:908035‑M2/100‑1 (MQ=255) ccGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGC > 1:2086942‑M2/1‑100 (MQ=255) ccGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGC > 2:2554678‑M2/1‑100 (MQ=255) cGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGC < 1:3234166‑M2/99‑1 (MQ=255) aGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCCGGGGCAATGACGGCggtcaggt > 1:1271243‑M2/1‑92 (MQ=255) ggTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTAC < 2:3210730‑M2/100‑1 (MQ=255) ggTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTAC > 2:404845‑M2/1‑100 (MQ=255) ggTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTAC > 2:3538448‑M2/1‑100 (MQ=255) gTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACC > 2:896039‑M2/1‑100 (MQ=255) gTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACC < 1:3056121‑M2/100‑1 (MQ=255) gTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACC > 1:3225632‑M2/1‑100 (MQ=255) gTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACC > 2:735773‑M2/1‑100 (MQ=255) gTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACC > 2:596114‑M2/1‑100 (MQ=255) tATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCA < 1:2660615‑M2/100‑1 (MQ=255) tATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCA < 1:452386‑M2/100‑1 (MQ=255) aTGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCAC > 1:1933207‑M2/1‑100 (MQ=255) aTGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCAC < 1:2088463‑M2/100‑1 (MQ=255) tGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACG < 1:397796‑M2/100‑1 (MQ=255) gAATACAACATCGCCGGTGAGCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGC < 2:3509132‑M2/100‑1 (MQ=255) gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGC < 1:1678310‑M2/100‑1 (MQ=255) gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGC < 1:3514381‑M2/100‑1 (MQ=255) gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGC < 2:109362‑M2/100‑1 (MQ=255) gAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGC < 1:177177‑M2/100‑1 (MQ=255) aaTACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCA < 2:3067821‑M2/100‑1 (MQ=255) aaTACAACATCGCCGGTGACCTGACCGCCGTCATTGCACCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGC < 1:2221020‑M2/99‑1 (MQ=255) tCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacgg < 1:2915914‑M2/100‑63 (MQ=255) cGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:1686734/100‑1 (MQ=11) cGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:836939/100‑1 (MQ=11) cGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTg < 1:3056957/100‑1 (MQ=11) gCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGa > 2:3503565/1‑100 (MQ=31) gCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGa > 2:3266656/1‑100 (MQ=31) gCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGa > 1:1166697/1‑100 (MQ=31) gCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGa > 1:2647843/1‑100 (MQ=31) ccGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGAc < 1:1529872/100‑1 (MQ=32) cGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGAcg < 2:3234188/100‑1 (MQ=32) gTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGAcgcg < 2:188170/100‑1 (MQ=33) gacctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCa < 2:470154/100‑1 (MQ=33) acctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAg < 1:1609681/100‑1 (MQ=33) cctgaccGCCGTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactg < 2:3052768‑M2/100‑73 (MQ=255) cctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAg > 2:432278/1‑99 (MQ=33) cctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGt > 2:1469842/1‑100 (MQ=33) cctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGt > 2:1467322/1‑100 (MQ=33) cctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGt > 1:2695384/1‑100 (MQ=33) cctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGt > 1:1155537/1‑100 (MQ=33) cctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGt > 1:338150/1‑100 (MQ=33) ctgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTa < 1:736881/100‑1 (MQ=33) tgaccGCCGTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtc < 1:2865165‑M2/100‑75 (MQ=255) tgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTAt < 1:3171855/100‑1 (MQ=32) tgaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTAt > 1:76582/1‑100 (MQ=32) gaccGCCGTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtcc < 2:3597294‑M2/100‑76 (MQ=255) gaccGCCGTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtcc < 2:3636070‑M2/100‑76 (MQ=255) gaccGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATg > 2:2008534/1‑100 (MQ=33) accGCCGTCATTGCCCCGGACGGCggtctggtcaccggcgatgttgtcttcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgccca < 1:371052‑M2/100‑77 (MQ=255) accGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATgg < 2:452388/100‑1 (MQ=33) accGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACAATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATgg < 2:1766267/100‑1 (MQ=18) ccgccgTCATTGCCCCGGAGGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATgg < 1:393094/99‑1 (MQ=18) ccgccgTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtccac < 1:3570631‑M2/100‑78 (MQ=255) ccgccgTCATTGCCCCGGACGGCggtcaggtcaccggcgatgttgtattcataccgcgtttcatggccctgcgtgtctttcacggcaattaactgtcca < 1:383048‑M2/99‑77 (MQ=255) ccgccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGa < 1:1815551/100‑1 (MQ=33) ccgccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGa > 2:836818/1‑100 (MQ=33) ccgccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGa > 2:1952714/1‑100 (MQ=32) ccgccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGa > 1:2917705/1‑100 (MQ=33) cgccgTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGaa > 1:3297477/1‑100 (MQ=33) | GACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAA > NC_000913/3620917‑3621099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |