New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3622540 =NA (NA)19 (0.150) 5/168 NT 100% coding (3349/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3622556 = 0 (0.000)coding (3365/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622454‑3622599
                                                                                      |                                                           
atttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATc                                                >  1:1552875‑M2/44‑100 (MQ=255)
 tttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCg                                               >  2:2107888‑M2/43‑100 (MQ=255)
    cactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGc                                            >  2:2264567‑M2/40‑100 (MQ=255)
     actttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg                                           >  2:57075‑M2/39‑100 (MQ=255)
      ctttccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:2926470‑M2/38‑100 (MQ=255)
      ctttccagccggtcgagcatctgcaccagcaccggcgGGAAGGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:598991‑M2/38‑100 (MQ=255)
      ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:812867‑M2/38‑100 (MQ=255)
      ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:3622354‑M2/38‑100 (MQ=255)
      ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  1:1578973‑M2/38‑100 (MQ=255)
      ctttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGCGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:3558734‑M2/38‑100 (MQ=255)
      actttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCgg                                          >  2:859379‑M2/38‑100 (MQ=255)
         ttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCt                                       >  2:1826721‑M2/35‑100 (MQ=255)
          ccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                      >  1:2723966‑M2/34‑100 (MQ=255)
          ccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTg                                      >  1:923577‑M2/34‑100 (MQ=255)
           ccagccggtcgagcatctgcaccgtgccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGa                                     >  1:3135113‑M2/33‑100 (MQ=255)
                                           GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTTCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  1:2416008‑M2/1‑100 (MQ=255)
                                           GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  1:2616245‑M2/1‑100 (MQ=255)
                                           GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  1:3034648‑M2/1‑100 (MQ=255)
                                           GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCg     >  2:141108‑M2/1‑100 (MQ=255)
                                            GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGATCAGATGCAAAACCAGATGGACCCgg    >  2:1544975‑M2/1‑100 (MQ=255)
                                            GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg    <  2:2363438‑M2/100‑1 (MQ=255)
                                             AAAGTGAAATCCTGGCTGACCGGGTTAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   <  2:1353121‑M2/100‑1 (MQ=255)
                                             AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   >  2:2505552‑M2/1‑100 (MQ=255)
                                             AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   <  2:3567104‑M2/100‑1 (MQ=255)
                                             AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   >  1:2830901‑M2/1‑100 (MQ=255)
                                             AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt   <  1:162525‑M2/100‑1 (MQ=255)
                                              AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  >  2:2887560‑M2/1‑100 (MQ=255)
                                              AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  >  1:1459676‑M2/1‑100 (MQ=255)
                                              AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:548664‑M2/100‑1 (MQ=255)
                                              AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  1:2790978‑M2/100‑1 (MQ=255)
                                              AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg  <  2:943429‑M2/100‑1 (MQ=255)
                                                                                      |                                                           
GTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622454‑3622599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.