New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4415962 =NA (NA)15 (0.120) 10/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein

Only 100 of 190 total aligned reads displayed.

TATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415866‑4416061
                                                                                                |                                                                                                   
accgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCg                                                                                                  >  1:2938814‑M1/97‑100 (MQ=255)
 ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  2:3248693‑M1/5‑1 (MQ=255)
 ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  1:559588‑M1/5‑1 (MQ=255)
 ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  1:3081459‑M1/5‑1 (MQ=255)
   tgctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAGTTGTAGGCCGGAc                                                                                               <  1:2311830/100‑1 (MQ=255)
    gctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACa                                                                                              >  1:1258045/1‑100 (MQ=255)
     ctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaa                                                                                             >  2:1528855/1‑100 (MQ=255)
      tgcGGGCGACGGGGGGA‑‑GTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                          >  1:1913763/1‑100 (MQ=255)
       gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                           <  2:725530/100‑1 (MQ=255)
        cGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                          <  1:3578843/100‑1 (MQ=255)
          ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcgc                                                                                        >  2:3340496/1‑100 (MQ=255)
            cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      >  2:2466636/1‑100 (MQ=255)
            cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      >  2:229968/1‑100 (MQ=255)
            cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      >  2:2499889/1‑100 (MQ=255)
             gACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcg                                                                                     <  2:951251/100‑1 (MQ=255)
                 gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                 <  2:3641035/100‑1 (MQ=255)
                 gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                 >  1:1633697/1‑100 (MQ=255)
                 gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                 >  2:2705190/1‑100 (MQ=255)
                 gggcgAGCGTGTGTGTAAGCGTATACGACTGATGCGCCGCTGGTTTCGATTAACTAAATGCACTATGTGACAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                 <  1:2335682/100‑1 (MQ=255)
                  ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                                <  1:3340473/100‑1 (MQ=255)
                  ggggAATGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                                <  1:1014497/100‑1 (MQ=255)
                    ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                              <  2:3043004/100‑1 (MQ=255)
                    ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                              >  1:1402217/1‑100 (MQ=255)
                          tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                        >  1:818602‑M2/1‑100 (MQ=255)
                          cagcagcctgataactggcgcgtacaggcgatactggatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCTCCGCAGCCGGc                                                                        >  2:2612792‑M1/71‑100 (MQ=255)
                           gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGCAAATTGTAGGCCTGACAAGGCGCTCGCGCCGCATCCGGC                                                                        <  1:676610‑M2/99‑1 (MQ=255)
                           gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                       >  2:1706123/1‑100 (MQ=255)
                            gcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                      >  2:2412002‑M1/69‑100 (MQ=255)
                             cagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                     >  1:3128980‑M1/68‑100 (MQ=255)
                             cagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                     >  2:3568026‑M1/68‑100 (MQ=255)
                              tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    <  2:856674/100‑1 (MQ=255)
                              cttccgatctctggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  2:2136910‑M1/67‑100 (MQ=255)
                              agcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  2:815354‑M1/67‑100 (MQ=255)
                               gcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                   >  1:3096382‑M1/66‑100 (MQ=255)
                                tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGagatcgga                                                                  <  1:2162839‑M2/100‑9 (MQ=255)
                                cctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                  >  1:3140312‑M1/65‑100 (MQ=255)
                                 ctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                 >  2:402413‑M1/64‑100 (MQ=255)
                                 ctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                 >  2:3701588‑M1/64‑100 (MQ=255)
                                 aaGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                 <  2:3018294/100‑1 (MQ=255)
                                 aaGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAAGGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                 <  1:1017933/100‑1 (MQ=255)
                                  aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                >  2:3629113/1‑100 (MQ=255)
                                   gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                               >  1:3289629/1‑100 (MQ=255)
                                   gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                               <  1:2293123/100‑1 (MQ=255)
                                     gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                             >  2:670961/1‑100 (MQ=255)
                                      tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                            <  1:1324040/100‑1 (MQ=255)
                                           gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                       >  1:2984050/1‑100 (MQ=255)
                                           gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                       <  2:2877056/100‑1 (MQ=255)
                                            aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                      <  1:758597/100‑1 (MQ=255)
                                             cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                     >  1:480986/1‑100 (MQ=255)
                                               gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   >  1:445345/1‑100 (MQ=255)
                                               gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   <  1:3629085/100‑1 (MQ=255)
                                               gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAAGCGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   >  2:1137979/1‑100 (MQ=255)
                                                 tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  2:2211156/100‑1 (MQ=255)
                                                 tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  2:1967167/100‑1 (MQ=255)
                                                  gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                                >  1:245390/1‑100 (MQ=255)
                                                   cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                               >  2:1675607/1‑100 (MQ=255)
                                                       gCTGGTTTCGATTAACTAAATGAAATATGTGCAAATTGTAGGCCGGACAAGACGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAt                                           >  1:1054793/1‑100 (MQ=255)
                                                       gCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAt                                           <  1:1787726/100‑1 (MQ=255)
                                                        cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                          <  2:1012156/100‑1 (MQ=255)
                                                         tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                         <  2:1071332/100‑1 (MQ=255)
                                                          ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                        <  2:1690930/100‑1 (MQ=255)
                                                          ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                        <  1:3518941/100‑1 (MQ=255)
                                                             ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  1:443629/100‑1 (MQ=255)
                                                             ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  2:498716/100‑1 (MQ=255)
                                                             ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  2:3400913/100‑1 (MQ=255)
                                                              tCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACa                                    <  1:2570339/100‑1 (MQ=255)
                                                               cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   >  1:3546950/1‑100 (MQ=255)
                                                               cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   >  2:3025222/1‑100 (MQ=255)
                                                                  ttAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTAt                                >  1:1334436/1‑100 (MQ=255)
                                                                    aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                              <  1:1706116/100‑1 (MQ=255)
                                                                       tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                           <  1:2667125/100‑1 (MQ=255)
                                                                       tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                           >  1:497860/1‑100 (MQ=255)
                                                                        aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                          <  2:1258051/100‑1 (MQ=255)
                                                                        aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                          >  1:3468374/1‑100 (MQ=255)
                                                                         aaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGt                         >  2:2540250/1‑100 (MQ=255)
                                                                          ntGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTTTGCAGTTGCGGTAGATGACACTCATGCATACAGTATCGCCTGTa                        >  1:1546900/2‑100 (MQ=38)
                                                                          aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                        >  1:923513/1‑100 (MQ=255)
                                                                          aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                        <  1:2677085/100‑1 (MQ=255)
                                                                           tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAc                       <  1:3025200/100‑1 (MQ=255)
                                                                                tatGTGAAAATTGTACGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc                  <  2:3040305/100‑1 (MQ=255)
                                                                                 atGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCa                 >  2:1585627/1‑100 (MQ=255)
                                                                                  tgtgAAAGTTGTAGGCCGGACAAGGCGCTCGAGCCGCATCCGGCATTGTTCATTTGCTGTAGGTGACACTCATGCATACAGTATCGCCTGTACGGGCCAg                >  1:2893909/1‑100 (MQ=38)
                                                                                  tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  1:941560/100‑1 (MQ=255)
                                                                                   gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt               <  1:1572772/100‑1 (MQ=255)
                                                                                    tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatagaaacagcgtcgcatcagtcgtatac              <  2:641122‑M2/100‑59 (MQ=255)
                                                                                    tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt              >  2:540948/1‑100 (MQ=255)
                                                                                    tgAAAATGGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAttt              >  2:1749353/1‑100 (MQ=255)
                                                                                     gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  1:1981430/1‑100 (MQ=255)
                                                                                     gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  2:1592325/1‑100 (MQ=255)
                                                                                       aaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc           <  2:312333/100‑1 (MQ=255)
                                                                                        aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa          <  1:1589102/100‑1 (MQ=255)
                                                                                          ttGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAgg        >  2:1870238/1‑100 (MQ=255)
                                                                                           tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgc       <  2:25471/100‑1 (MQ=255)
                                                                                            gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttaca      <  2:2166522‑M2/100‑67 (MQ=255)
                                                                                              aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgc    <  1:3533005/100‑1 (MQ=255)
                                                                                              aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgc    <  1:88295/100‑1 (MQ=255)
                                                                                               ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacac   <  2:386647‑M2/100‑70 (MQ=255)
                                                                                               ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacac   <  1:2188301‑M2/100‑70 (MQ=255)
                                                                                               ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:1451255/1‑100 (MQ=255)
                                                                                               ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACGCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:2386084/1‑100 (MQ=255)
                                                                                                |                                                                                                   
TATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415866‑4416061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.