New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 354733NA (NA)14 (0.120) 8/164 NT NA noncoding (135/171 nt) REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 354765 NA (NA)noncoding (167/171 nt) REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 185 total aligned reads displayed.

GCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATA  >  NC_000913/354634‑354832
                                                                                                   |                                                                                                   
gCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCatat                                                                                                     >  1:1757660/1‑100 (MQ=255)
gCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGAt                                                                                                     >  1:1120006/1‑100 (MQ=255)
 ccGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATg                                                                                                    >  2:966164‑M1/1‑99 (MQ=255)
 ccGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATg                                                                                                    <  1:348364‑M1/100‑2 (MQ=255)
  cGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgc                                                                                                   <  1:1560862‑M1/100‑3 (MQ=255)
   gATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcc                                                                                                  <  2:2114878‑M1/100‑4 (MQ=255)
    aTGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcct                                                                                                 <  2:1336671‑M1/100‑5 (MQ=255)
     tGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGTTCGGATAAGGCGCTCGCGGCGCATCCGACACCATGCTCAGATgcc                                                                                                  <  2:3165909‑M1/98‑4 (MQ=255)
      gCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctga                                                                                               >  1:1387744‑M1/1‑94 (MQ=255)
       ccTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgat                                                                                              >  2:3726758‑M1/1‑93 (MQ=255)
        cTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATg                                                                                             <  1:920835/100‑1 (MQ=255)
         tGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGc                                                                                            <  2:578606/100‑1 (MQ=255)
            tGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGAc                                                                                         >  2:3415365/1‑100 (MQ=255)
             gCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACg                                                                                        >  2:1450668/1‑100 (MQ=255)
             gCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACg                                                                                        >  2:1930261/1‑100 (MQ=255)
              cGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACg                                                                                        >  1:814683/1‑99 (MQ=255)
                aCGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTg                                                                                     <  2:2842681/100‑1 (MQ=255)
                 cGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGa                                                                                    >  2:1918402/1‑100 (MQ=255)
                  gCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAc                                                                                   <  1:3730758/100‑1 (MQ=255)
                   cTGACGCGTTTTATCATGCCTACGTACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcg                                                                                  <  2:287469/100‑1 (MQ=255)
                   cTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcg                                                                                  <  2:731595/100‑1 (MQ=255)
                     gACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcgcg                                                                                >  2:1120623/1‑100 (MQ=255)
                        gcgTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCt                                                                             <  1:3579331/100‑1 (MQ=255)
                          gTTTTATCATGACTACGGAACTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGAGACCATGCTGAGATGCCTGGTGCGACGCTGACGCGTCt                                                                             >  1:2174703/1‑98 (MQ=37)
                            tttATCATGCCTACGGACCCGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGCTGCGACGCTGACGCGTCTTATC                                                                         <  2:410586‑M2/100‑1 (MQ=255)
                             ttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatca                                                                        <  2:429282‑M1/100‑30 (MQ=255)
                              tATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcag                                                                       <  2:426740‑M1/100‑31 (MQ=255)
                               accatGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcagg                                                                      <  2:2542775‑M1/98‑32 (MQ=255)
                               aTCATGCCTACGGGCCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcagg                                                                      <  2:3641299‑M1/100‑32 (MQ=255)
                               aTCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      >  1:2137740‑M2/1‑100 (MQ=255)
                               aTCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      >  1:563717‑M2/1‑100 (MQ=255)
                                tCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggc                                                                     <  1:2684719‑M1/100‑33 (MQ=255)
                                tCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     <  2:3734613‑M2/100‑1 (MQ=255)
                                 cATGCCTACGGACCTGAACCGTAGGTCTGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggca                                                                    <  2:1280223‑M1/100‑34 (MQ=255)
                                     ccTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTagc                                                                <  2:2528819/100‑3 (MQ=255)
                                     ccTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAcc                                                                >  1:1844750/1‑100 (MQ=255)
                                     ccTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAcc                                                                >  2:107927/1‑100 (MQ=255)
                                      cTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAccc                                                               <  2:1423412/100‑1 (MQ=255)
                                      cTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAccc                                                               >  2:1799441/1‑100 (MQ=255)
                                        aCGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCGTACCCAc                                                             >  1:596081/1‑100 (MQ=255)
                                         cGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACt                                                            >  2:1570064/1‑100 (MQ=255)
                                              cTGAATCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGtttt                                                       <  2:1502889/100‑1 (MQ=255)
                                              cTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGtttt                                                       <  2:1781775/100‑1 (MQ=255)
                                              cTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGtttt                                                       <  2:1387749/100‑1 (MQ=255)
                                              cTGAACCGTAGGTCGGATAAGGCGCTCGCGTAGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGtttt                                                       >  1:2577192/1‑100 (MQ=255)
                                              cTGAACCGTAGGTCAGACACGGCGCTCGCGTCGCCTCCGCCACCCTGCTCACACGCCTGACGCGCCGCTGCCGCATCCTATCAGGCCTACCCACTGttt                                                        >  1:2302945/1‑99 (MQ=255)
                                               tGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGttttt                                                      <  2:2433174/100‑1 (MQ=255)
                                                gAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGTCGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTa                                                     <  1:1510190/100‑1 (MQ=255)
                                                gAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGttttt                                                      >  2:137680/1‑99 (MQ=255)
                                                   ccGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac                                                  <  2:3543020/100‑1 (MQ=255)
                                                   ccGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac                                                  >  2:1211794/1‑100 (MQ=255)
                                                   ccGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac                                                  <  1:3093145/100‑1 (MQ=255)
                                                   ccGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac                                                  <  2:2247977/100‑1 (MQ=255)
                                                     gTAGGTCGGATAAGGCGCTCGCCTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCg                                                >  1:2170374/1‑100 (MQ=255)
                                                       aGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGAt                                              >  2:3183455/1‑100 (MQ=255)
                                                       aGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGAt                                              >  1:1282524/1‑100 (MQ=255)
                                                         gTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATaa                                            >  1:1255628/1‑100 (MQ=255)
                                                           cGGATAGGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAtt                                          >  2:1995580/1‑100 (MQ=255)
                                                           cGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAtt                                          >  1:1079624/1‑100 (MQ=255)
                                                              cgatctcgcTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAttttt                                       <  1:1228938/94‑1 (MQ=255)
                                                               tAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTc                                      <  1:1406239/100‑1 (MQ=255)
                                                                 aGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTccc                                    >  2:2356644/1‑100 (MQ=255)
                                                                  ggCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTcccc                                   <  2:524961/100‑1 (MQ=255)
                                                                  ggCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTcccc                                   <  2:880288/100‑1 (MQ=255)
                                                                  ggCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTcccc                                   <  2:2286789/100‑1 (MQ=255)
                                                                   gcgcTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTccccc                                  <  2:1280281/100‑1 (MQ=255)
                                                                    cgcTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAtttttagatcg                                 >  2:1228944/1‑94 (MQ=255)
                                                                     gcTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCAc                                >  1:2720849/1‑100 (MQ=255)
                                                                      cTCGCGTCGCCTCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACACATTGTTTTTACACCGATAATTTTTCCCCCAcc                               <  1:2457987/100‑1 (MQ=255)
                                                                          cgTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCtttt                           <  1:3415341/100‑1 (MQ=255)
                                                                          cgTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCtttt                           >  2:3127991/1‑100 (MQ=255)
                                                                           gTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCttttt                          <  1:1077039/100‑1 (MQ=255)
                                                                             cGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGc                        <  2:1527624/100‑1 (MQ=255)
                                                                             cGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGc                        <  2:1083006/100‑1 (MQ=255)
                                                                             cGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGc                        <  1:2632229/100‑1 (MQ=255)
                                                                             cGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGc                        <  1:3200405/100‑1 (MQ=255)
                                                                              gCATGCGACACCATGCTCAGATGCCTCGTGCGACGCTGACGCGTCTCATCAGTCCTACCCACTGTTGTTACACCGATAATTTTTCCCCCACCtttgcgca                       >  1:2228469/1‑95 (MQ=255)
                                                                                   cGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcat                  >  1:1592995/1‑100 (MQ=255)
                                                                                   cGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcat                  >  1:197209/1‑100 (MQ=255)
                                                                                     acacCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcattc                >  1:2528274/1‑100 (MQ=255)
                                                                                      cacCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcattca               <  1:1488494/100‑1 (MQ=255)
                                                                                      cacCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcattca               <  1:1798161/100‑1 (MQ=255)
                                                                                        ccATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCata             >  1:3461197/1‑100 (MQ=255)
                                                                                          aTGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCAtata           >  2:1992558/1‑100 (MQ=255)
                                                                                            gCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATaaa         >  2:1591528/1‑100 (MQ=255)
                                                                                             cTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATaaaa        >  1:885365/1‑100 (MQ=255)
                                                                                               cAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtagg      <  1:2478194‑M2/100‑64 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAat     <  2:3135410/100‑1 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAat     <  2:3461221/100‑1 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAat     <  2:1989540/100‑1 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTGTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAat     <  1:3394322/100‑1 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGTCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccctaggca    <  1:2471448‑M2/100‑66 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggca    <  2:1554856‑M2/100‑66 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAata    <  1:566848/100‑1 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAata    <  1:1918392/100‑1 (MQ=255)
                                                                                                  aTGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtcggcct   <  2:2548082‑M2/100‑67 (MQ=255)
                                                                                                  aTGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggcat   <  2:2548461‑M2/100‑67 (MQ=255)
                                                                                                   tGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggcatg  <  2:2765417‑M2/100‑68 (MQ=255)
                                                                                                   tGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAatata  <  1:1696524/100‑1 (MQ=255)
                                                                                                   tGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAatata  >  2:2713215/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATA  >  NC_000913/354634‑354832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.