New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)10 (0.080) 6/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 182 total aligned reads displayed.

GAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805705‑805903
                                                                                                   |                                                                                                   
ttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagg                                                                                                     >  1:3180878‑M1/100‑100 (MQ=255)
  gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   <  2:1576065/100‑1 (MQ=255)
  gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   <  2:2101229/100‑1 (MQ=255)
   ctcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCg                                                                                                  <  2:3338278/98‑1 (MQ=255)
    gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgg                                                                                                 >  2:523972/1‑100 (MQ=255)
    gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgg                                                                                                 >  2:1599925/1‑100 (MQ=255)
    aggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCgg                                                                                                 <  2:1025026‑M1/5‑1 (MQ=255)
     ggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGga                                                                                                <  2:1057604‑M1/6‑1 (MQ=255)
     cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTCGGTCGCATTCGGCACTTATTGTCGga                                                                                                <  2:2281200/100‑1 (MQ=255)
     cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgag                                                                                                >  1:3338255/1‑98 (MQ=255)
     cgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGga                                                                                                >  2:1721621/1‑100 (MQ=255)
        gaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgc                                                                                             <  1:2208014/100‑1 (MQ=255)
         ggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaacatgccttttctggccttcagattcgatgcgattcgtaggtttgataa                                                                                             <  1:412727‑M1/9‑8 (MQ=255)
         aTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcg                                                                                            >  2:2226983/1‑100 (MQ=255)
         aTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcg                                                                                            >  1:475726/1‑100 (MQ=255)
           tATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgat                                                                                          >  1:2935616/1‑100 (MQ=255)
            aTCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgatg                                                                                         >  2:208955/1‑100 (MQ=255)
            aTCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgatg                                                                                         >  2:427551/1‑100 (MQ=255)
            aTCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTCATTGTCGgctgcgatg                                                                                         >  1:1534255/1‑100 (MQ=255)
                 ggCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgc                                                                                    >  2:1191432/1‑100 (MQ=255)
                 ggCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgc                                                                                    >  1:3568230/1‑100 (MQ=255)
                  gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcg                                                                                   <  2:2189768/100‑1 (MQ=255)
                   cGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcga                                                                                  >  1:1363177/1‑99 (MQ=255)
                         gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  2:2718966/1‑100 (MQ=255)
                         gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  2:2905691/1‑100 (MQ=255)
                         gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  2:3140118/1‑100 (MQ=255)
                           ttGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTAAATGAAGCTCGCATTCGGCACTAATTGTCGGATGCGTTGCTTGCGCa                                                                                 >  1:3422053/1‑93 (MQ=255)
                            tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         <  2:986285/100‑1 (MQ=255)
                            tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:1374567/1‑100 (MQ=255)
                            cttccgatctCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         <  1:904893/91‑1 (MQ=255)
                               ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCTCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      <  2:3321516/100‑1 (MQ=255)
                               ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      >  2:2928132/1‑100 (MQ=255)
                                tccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     >  2:2591856‑M1/68‑100 (MQ=255)
                                tccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     >  2:2753846‑M1/68‑100 (MQ=255)
                                tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     <  2:1298556/100‑1 (MQ=255)
                                 aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  2:67874/1‑100 (MQ=255)
                                 aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  2:1558074/1‑100 (MQ=255)
                                  aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                   >  2:2981994/1‑100 (MQ=255)
                                  aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGAGGCTTGCGCATCTTATCCGTCCt                                                                    >  2:2035397/1‑99 (MQ=255)
                                   gacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCcgaccaga                                                                  <  1:564411‑M1/36‑4 (MQ=255)
                                   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  >  1:3552757/1‑100 (MQ=255)
                                   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  <  2:1069922/100‑1 (MQ=255)
                                   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  <  1:1302476/100‑1 (MQ=255)
                                    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 <  2:3400247/100‑1 (MQ=255)
                                    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 <  1:1585092/100‑1 (MQ=255)
                                     tCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                >  1:3472245/1‑100 (MQ=255)
                                       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              <  2:2606204/100‑1 (MQ=255)
                                       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              >  2:604613/1‑100 (MQ=255)
                                        aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAtn                                                             <  2:3511922/100‑2 (MQ=255)
                                        aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             >  2:3269133/1‑100 (MQ=255)
                                         tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCg                                                            >  2:3233018/1‑100 (MQ=255)
                                           aaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCa                                                          <  1:2321587/100‑1 (MQ=255)
                                            aaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCAt                                                         <  2:941223/100‑1 (MQ=255)
                                             gccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCa                                                          >  1:1099560‑M1/55‑98 (MQ=255)
                                             aaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATc                                                        <  1:3046702/100‑1 (MQ=255)
                                              ccggttgctgcgaaaatgccttatctggccgacagcttcgatgcgattcgtagCTCGGATGCGCTGCTTGCGCATCTTATCCGACCTACGAATCGCa                                                          >  1:2748468‑M1/54‑97 (MQ=255)
                                              aCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                       <  2:2767069/100‑1 (MQ=255)
                                              aCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                       >  1:782910/1‑100 (MQ=255)
                                               ccGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                      <  2:3002066/100‑1 (MQ=255)
                                                cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                     >  1:941897/1‑100 (MQ=255)
                                                  tCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATc                                                   >  1:2547402/1‑100 (MQ=255)
                                                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                  <  2:2575056/99‑1 (MQ=255)
                                                     gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATc                                                   >  1:371873/1‑97 (MQ=255)
                                                     gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGt                                                <  2:3561673/100‑1 (MQ=255)
                                                      aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTa                                               <  1:878551/100‑1 (MQ=255)
                                                       tGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATTCGACCTACGAATCGCATCGAATcgttgg                                              >  1:3314522/1‑95 (MQ=255)
                                                       tGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                              >  1:888467/1‑100 (MQ=255)
                                                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                             >  2:1622219/1‑100 (MQ=255)
                                                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                             <  2:3018246/100‑1 (MQ=255)
                                                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGAATCGAATCTGTAGGc                                            >  2:3677515/1‑100 (MQ=255)
                                                          aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGAAg                                              >  1:198364/1‑97 (MQ=255)
                                                            aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                         <  2:408195/100‑1 (MQ=255)
                                                            aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                         <  2:1781877/100‑1 (MQ=255)
                                                                 gcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAg                                    >  2:2298953/1‑100 (MQ=255)
                                                                   cATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGc                                  >  2:668558/1‑100 (MQ=255)
                                                                    aTGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGc                                  <  1:2831536/99‑1 (MQ=255)
                                                                    aTGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCa                                 <  2:134932/100‑1 (MQ=255)
                                                                    aTGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCa                                 >  2:3455179/1‑100 (MQ=255)
                                                                     tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATACGGcct                                >  2:309656/1‑98 (MQ=255)
                                                                     tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                >  1:649587/1‑100 (MQ=255)
                                                                     tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                >  2:2329311/1‑100 (MQ=255)
                                                                           tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          <  1:1770592/100‑1 (MQ=255)
                                                                            gTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgca                         >  2:2477332/1‑100 (MQ=255)
                                                                                gTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTCTAGGCAATTTAAGGCATTTTCGCACCAt                     >  1:257722/1‑100 (MQ=18)
                                                                                   gCATGCGGCACTGATGGGCGGATGCGATGCTTGCGCATCTTATCCGACCGACGAAGCTCATCTAACCTGTATGCCAGATAGGGCATTTCCCCatcatcgg                  >  1:1242100/1‑98 (MQ=9)
                                                                                    cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGTTAAGGCATTTTCGCAGCATCCgg                 >  1:3176875/1‑100 (MQ=255)
                                                                                      ttCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGTTAAGGCTTTTTCGCAGCATcc                   >  1:2683279/1‑96 (MQ=255)
                                                                                         ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCAGCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCTGGCaat             >  1:2068523/1‑97 (MQ=17)
                                                                                          gCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTa           <  2:782914/100‑1 (MQ=255)
                                                                                           cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTAt          <  2:901007/100‑1 (MQ=255)
                                                                                              ttATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTg        >  1:2094777/1‑99 (MQ=255)
                                                                                              ttATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGt       >  1:152378/1‑100 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGt       >  1:3612632/1‑99 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  2:2438354/100‑1 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      >  2:1001956/1‑100 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      >  2:1863051/1‑100 (MQ=255)
                                                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg     >  1:1157334/1‑100 (MQ=255)
                                                                                                 ttGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCATCTTTTGTCAATTATTGt       >  1:197871/1‑97 (MQ=18)
                                                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  <  2:2095378‑M1/100‑1 (MQ=255)
                                                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGCCATTTTCCCAGCATCCGGCACTTATTGTCGgat  <  1:2126246‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805705‑805903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.