New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2794135NA (NA)10 (0.080) 9/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 193 total aligned reads displayed.

CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACA  >  NC_000913/2794036‑2794234
                                                                                                   |                                                                                                   
cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                                                                                                     >  2:2383417/1‑100 (MQ=255)
 gACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGg                                                                                                    >  2:1994206‑M1/1‑99 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  2:1591900/100‑1 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  1:134278/100‑1 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               >  2:1893294/1‑100 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               >  2:3613656/1‑100 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  2:377880/100‑1 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACAGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  2:2340596/100‑1 (MQ=255)
      cttccgatctGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  2:2057219/91‑1 (MQ=255)
        cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                                                                                             >  1:11965/1‑100 (MQ=255)
         gcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTaa                                                                                            >  2:2115909/1‑100 (MQ=255)
           gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcg                                                                                          >  1:3053284‑M1/1‑89 (MQ=255)
               tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa                                                                                      <  2:3479235/100‑1 (MQ=255)
               tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa                                                                                      >  2:1859979/1‑100 (MQ=255)
                gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCgggagatcggaag                                                                                     >  1:2057209/1‑90 (MQ=255)
                gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg                                                                                     <  2:1177392/100‑1 (MQ=255)
                gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg                                                                                     >  2:2153824/1‑100 (MQ=255)
                 tCCGGCATACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc                                                                                    <  2:344523/100‑1 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   <  2:1543871/100‑1 (MQ=255)
                    ggCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc                                                                                 >  1:1884476/1‑100 (MQ=255)
                      ccTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctc                                                                               >  2:58753/1‑100 (MQ=255)
                      ccTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctc                                                                               >  1:1697630/1‑100 (MQ=255)
                       cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct                                                                              <  2:1123375/100‑1 (MQ=255)
                       cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct                                                                              <  1:1624301/100‑1 (MQ=255)
                         aCGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCC                                                                            <  1:3558914‑M2/100‑1 (MQ=255)
                          cGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCG                                                                           >  1:655770‑M2/1‑100 (MQ=255)
                          cGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCG                                                                           <  1:1323806‑M2/100‑1 (MQ=255)
                          cGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCG                                                                           <  2:1731243‑M2/100‑1 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                          >  2:788880‑M2/1‑100 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAACTCTATGTTGgccggagagcggctccgccttacccggc                                                                         <  1:903385‑M1/100‑29 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                         <  2:2379345‑M2/100‑1 (MQ=255)
                                tCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaac                                                                     <  2:2440437‑M1/100‑33 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                    >  2:3693633/1‑100 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                   >  2:1088040/1‑100 (MQ=255)
                                   aGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGa                                                                  <  1:3239993/100‑1 (MQ=255)
                                   aGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGa                                                                  >  2:3464033/1‑100 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                 >  1:3129906/1‑100 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                 <  2:2276688/100‑1 (MQ=255)
                                       cGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCa                                                              <  2:1373452/100‑1 (MQ=255)
                                         gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                            >  2:809479/1‑100 (MQ=255)
                                           tAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATaa                                                          >  1:3341777/1‑100 (MQ=255)
                                           tAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATaa                                                          >  2:2020636/1‑100 (MQ=255)
                                              ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                       >  2:928220/1‑100 (MQ=255)
                                                cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacatagatttcttcctgt                                                     <  2:3053306‑M1/100‑49 (MQ=255)
                                                   ttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtata                                                  <  1:1862012/100‑1 (MQ=255)
                                                     aCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcg                                                <  2:3105245/100‑1 (MQ=255)
                                                     aCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcg                                                <  2:1220381/100‑1 (MQ=255)
                                                      cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                               >  2:106928/1‑100 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCACAAAAAAGCAAAAAGAATCAATAACAATTATAcgcg                                              <  1:95003/100‑1 (MQ=255)
                                                        ccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGt                                             <  1:620245/100‑1 (MQ=255)
                                                        ccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCGCTCCGGCAAAAAGAATCAATAACAATTATACGCGt                                             <  1:716771/100‑1 (MQ=255)
                                                         cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                            <  1:3492907/100‑1 (MQ=255)
                                                         cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                            >  1:834441/1‑100 (MQ=255)
                                                         cgcATCCGACAATCTGTACGCGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCCCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                            <  2:1748800/100‑1 (MQ=255)
                                                           cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                          >  2:2747762/1‑100 (MQ=255)
                                                            aTCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAcc                                         >  2:3200329/1‑100 (MQ=255)
                                                             tCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                        >  1:3410000/1‑100 (MQ=255)
                                                             tCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                        >  1:1482511/1‑100 (MQ=255)
                                                               cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                      <  1:1088034/100‑1 (MQ=255)
                                                                 aCAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcg                                    >  1:3677196/1‑100 (MQ=255)
                                                                  cAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcgc                                   >  2:2212009/1‑100 (MQ=255)
                                                                     tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                >  1:2182056/1‑100 (MQ=255)
                                                                      cTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGa                               <  2:2144047/100‑1 (MQ=255)
                                                                       tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                              <  1:1121965/100‑1 (MQ=255)
                                                                       tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                              >  2:66864/1‑100 (MQ=255)
                                                                        gTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                             <  1:3512437/100‑1 (MQ=255)
                                                                        cttccgatctaGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                             <  2:3302361/90‑1 (MQ=255)
                                                                         tACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAAt                            <  2:3131749/100‑1 (MQ=255)
                                                                          aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                           <  1:3523891/100‑1 (MQ=255)
                                                                          aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                           <  2:1323812/100‑1 (MQ=255)
                                                                           cGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGt                          >  1:107861/1‑100 (MQ=255)
                                                                           cGTGAACAGGAAGAAATCTATGCTGGCCGGGTAAGGCGGAGCCTCTCTCCGGCAAAAAAAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                             <  1:1585494/97‑1 (MQ=255)
                                                                            gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTc                         <  1:2379331/100‑1 (MQ=255)
                                                                            gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTc                         <  1:1067879/100‑1 (MQ=255)
                                                                             tGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGACATGTCg                        >  2:473802/1‑100 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgc                    <  2:2030571‑M2/100‑54 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    >  2:548313/1‑100 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    >  2:3415173/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                  >  1:2328709/1‑100 (MQ=255)
                                                                                     aagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGctc                >  1:2993777/1‑100 (MQ=255)
                                                                                      agaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGctct               >  1:2256546/1‑100 (MQ=255)
                                                                                       gaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCtctc              <  1:2937487/100‑1 (MQ=255)
                                                                                         aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc            <  1:2878132/100‑1 (MQ=255)
                                                                                          aTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccga           <  1:153831‑M2/100‑63 (MQ=255)
                                                                                          aTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCa           >  2:978311/1‑100 (MQ=255)
                                                                                            cTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAg         <  2:2799696/100‑1 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacc         <  1:1374339‑M2/99‑65 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt        <  1:2792492/100‑1 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt        <  1:1731236/100‑1 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtcaacgccttatccgacctg       <  1:3500007‑M2/100‑67 (MQ=255)
                                                                                               tGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgg      <  1:2962931‑M2/100‑68 (MQ=255)
                                                                                               tGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGa      >  2:2454499/1‑100 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgga     <  1:3432254‑M2/100‑69 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac     >  2:971284/1‑100 (MQ=255)
                                                                                                 ttGGCCGGGTCAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCTGGAAATGTCGGGGCGCTCTCCCAAGTGaca    <  1:2454486/100‑1 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac   <  1:255886/100‑1 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac   <  1:3048262/100‑1 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac   <  2:3006660/100‑1 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac   >  1:394628/1‑100 (MQ=255)
                                                                                                   ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca  >  2:428392/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACA  >  NC_000913/2794036‑2794234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.