New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2798053 =NA (NA)13 (0.110) 8/166 NT NA noncoding (1/30 nt) REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2798083 = NA (NA)intergenic (+39/+8) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated

Only 100 of 172 total aligned reads displayed.

GTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797955‑2798151
                                                                                                  |                                                                                                  
 ttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGcc                                                                                                  <  1:3055359/100‑1 (MQ=255)
 ttgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGcc                                                                                                  <  1:2592690/100‑1 (MQ=255)
  tgGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCg                                                                                                 <  2:3276465/100‑1 (MQ=255)
   aaaacctggaccggtcagggccgtacaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCgg                                                                                                >  1:780508‑M1/96‑100 (MQ=255)
    gTGCCGGGTTACTGGTTGCATGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCggn                                                                                               <  1:3061005/100‑2 (MQ=255)
    aaacctggaccggtcagggccgtacaccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCGGa                                                                                               >  2:2320159‑M1/95‑100 (MQ=255)
     tGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGAc                                                                                              >  1:1001732/1‑100 (MQ=255)
          ggTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGcc                                                                                         <  2:2249914/100‑1 (MQ=255)
           gTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGccc                                                                                        <  1:1857722/100‑1 (MQ=255)
            ttACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCt                                                                                       <  1:1536174/100‑1 (MQ=255)
            ttACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCt                                                                                       <  2:3628294/100‑1 (MQ=255)
              aCTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTag                                                                                     >  2:2910017/1‑100 (MQ=255)
               cTGTTTGCAGGAATCAGCGGTTTTTTTTTTTTTTTTTTGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagc                                                                                    >  1:132374/1‑100 (MQ=255)
                tGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagca                                                                                   <  2:1889510/100‑1 (MQ=255)
                tGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagca                                                                                   >  1:1081730/1‑100 (MQ=255)
                 gTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcag                                                                                  >  2:3581341/1‑100 (MQ=255)
                   ttGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCg                                                                                <  2:826187/100‑1 (MQ=255)
                    tGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               <  2:3390718/100‑1 (MQ=255)
                    tGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCATGAGAAGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               >  1:2291966/1‑100 (MQ=255)
                    tGCAGGAATCAGCGGTTTTTGTGGAAGGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               <  1:3453635/100‑1 (MQ=255)
                     gCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGa                                                                               <  2:3105036/99‑1 (MQ=255)
                     gCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGAc                                                                              >  1:3194544/1‑100 (MQ=255)
                            caccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCGGACGCGCCCTAGCAGCGACATCCGGc                                                                       >  1:2127261‑M1/71‑100 (MQ=255)
                            caccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCGGACGCGCCCTAGCAGCGACATCCGGc                                                                       >  2:952639‑M1/71‑100 (MQ=255)
                             cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      >  2:1707058/1‑100 (MQ=255)
                             cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      <  2:1652004/100‑1 (MQ=255)
                             cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                      <  2:1467851/100‑1 (MQ=255)
                              ccgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgacGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     <  1:3274977‑M1/32‑1 (MQ=255)
                              aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                     >  1:34454/1‑100 (MQ=255)
                               gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:1380687/1‑100 (MQ=255)
                               gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  1:2397616/1‑100 (MQ=255)
                               gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:3062963/1‑100 (MQ=255)
                               cgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgacGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:3275000‑M1/68‑100 (MQ=255)
                                gaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   >  2:348814‑M1/67‑100 (MQ=255)
                                gaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgacGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   >  2:544203‑M1/67‑100 (MQ=255)
                                gaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgacGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                   >  2:1083592‑M1/67‑100 (MQ=255)
                                gaagccaactgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgacGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                    >  2:2983262‑M1/67‑99 (MQ=255)
                                 ggTTTTTGTGTAATGGCAAGTGTGATAGATAAGGTGCCGTAGATCCAACGAGCTTGAGAAGCGTGGCCGGTCGCGCCCTAGCAGCGACaacagg                                                                        >  1:2045717/1‑89 (MQ=255)
                                 ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  <  1:3653632/100‑1 (MQ=255)
                                 aagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                  >  2:958354‑M1/66‑100 (MQ=255)
                                  gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGt                                                                 <  1:3228773/100‑1 (MQ=255)
                                   tttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTa                                                                <  2:1989139/100‑1 (MQ=255)
                                   tttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTa                                                                <  2:264919/100‑1 (MQ=255)
                                   gccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgagGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTa                                                                >  1:2015089‑M1/64‑100 (MQ=255)
                                    ttttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTaa                                                               >  2:3513543/1‑100 (MQ=255)
                                      ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                             <  1:1762812/100‑1 (MQ=255)
                                      ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                             <  1:2880372/100‑1 (MQ=255)
                                         tgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGa                                                          <  2:2046640/100‑1 (MQ=255)
                                         tgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGa                                                          >  1:1583818/1‑100 (MQ=255)
                                         tgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGa                                                          >  2:2747961/1‑100 (MQ=255)
                                          ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  2:1525415/1‑100 (MQ=255)
                                          ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         <  1:171845/100‑1 (MQ=255)
                                          ggAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAt                                                         >  1:1590232/1‑100 (MQ=255)
                                             aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                      >  2:101860/1‑100 (MQ=255)
                                             aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                      <  1:993896/100‑1 (MQ=255)
                                              tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAgg                                                     <  1:1968207/100‑1 (MQ=255)
                                               ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                    <  2:1787194/100‑1 (MQ=255)
                                                gCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                   >  2:3254906/1‑100 (MQ=255)
                                                 cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGTGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                  >  1:2624630/1‑100 (MQ=255)
                                                 cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                  >  1:2253750/1‑100 (MQ=255)
                                                 cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                  >  2:227552/1‑100 (MQ=255)
                                                    ggTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcg                                               >  2:2670086/1‑100 (MQ=255)
                                                      ttgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtc                                             <  1:3686528/100‑1 (MQ=255)
                                                       tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                            <  2:847058/100‑1 (MQ=255)
                                                          tAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                         >  2:2312967/1‑100 (MQ=255)
                                                          tAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                         >  2:1592425/1‑100 (MQ=255)
                                                          tAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                         >  2:2888288/1‑100 (MQ=255)
                                                           aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagag                                        >  2:2111846/1‑100 (MQ=255)
                                                           aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagag                                        <  2:2000861/100‑1 (MQ=255)
                                                            gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATTGTCgagaga                                       >  1:2851835/1‑100 (MQ=255)
                                                             aTAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAt                                      <  2:857833/100‑1 (MQ=255)
                                                              tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                     >  1:2194871/1‑100 (MQ=255)
                                                                   tGCCGTGGAACCACCGAGCTTGAGAAGCGACGCGAGATGCGCCCTAGCAGCGACATCCCGCCTCAGTAATGAGATCAGGAAATCGTCGAGAGATTTAc                                  <  1:710907/98‑1 (MQ=255)
                                                                   tGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCt                                <  1:3292929/100‑1 (MQ=255)
                                                                   tGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCt                                <  2:34455/100‑1 (MQ=255)
                                                                    gCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCtt                               >  2:3576017/1‑100 (MQ=255)
                                                                     ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCGTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTc                              >  1:2044898/1‑100 (MQ=255)
                                                                          gAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCa                         <  1:1411250/100‑1 (MQ=255)
                                                                           aaCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAg                        >  1:907581/1‑100 (MQ=255)
                                                                            aCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCGCAGGAATTAGAGCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgc                       >  1:1938893/1‑100 (MQ=255)
                                                                             ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcg                      <  1:2701588/100‑1 (MQ=255)
                                                                               aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                    <  1:1006087/100‑1 (MQ=255)
                                                                                aCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCt                   >  1:458913/1‑100 (MQ=255)
                                                                                   aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                >  2:1492230/1‑100 (MQ=255)
                                                                                    gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  1:1311553/100‑1 (MQ=255)
                                                                                    gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               <  2:2225645/100‑1 (MQ=255)
                                                                                    gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc               >  1:1665898/1‑100 (MQ=255)
                                                                                     cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa              >  2:740614/1‑100 (MQ=255)
                                                                                       tGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAt            >  2:342939/1‑100 (MQ=255)
                                                                                         agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          >  2:2835704/1‑100 (MQ=255)
                                                                                         agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg          <  1:3617808/100‑1 (MQ=255)
                                                                                         acaaGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGCGAGTTTTACCTTCTGCCAGCGCCTGAGCAAtt           >  1:252767/3‑99 (MQ=255)
                                                                                           aaGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTGGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGc        <  1:1996031/100‑1 (MQ=255)
                                                                                              cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc     >  2:3721560/1‑100 (MQ=255)
                                                                                              cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc     <  2:2852190/100‑1 (MQ=255)
                                                                                               gACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAGTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCg    <  2:2570556/100‑1 (MQ=255)
                                                                                                aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  2:1874094/100‑1 (MQ=255)
                                                                                                aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  2:1927237/100‑1 (MQ=255)
                                                                                                aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg   <  2:1257144/100‑1 (MQ=255)
                                                                                                 cGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt  <  2:320044/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
GTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGT  >  NC_000913/2797955‑2798151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.