BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2835118	NA (NA)	8 (0.070)	6/164	NT	NA	noncoding (52/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 2835148	NA (NA)	8 (0.070)	6/164	NT	NA	noncoding (82/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 186 total aligned reads displayed.

GATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAT  >  NC_000913/2835020‑2835217

gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGg                                                                                                    >  2:1589946‑M1/1‑99 (MQ=255)

gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGg                                                                                                    >  1:2635690‑M1/1‑99 (MQ=255)

   tgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAAGGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccn                                                                                                 <  2:1450339‑M1/100‑5 (MQ=255)

    gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                <  2:2366552‑M1/100‑6 (MQ=255)

    gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                >  2:134788‑M1/1‑95 (MQ=255)

      tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGCTGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                >  1:1055211‑M1/1‑93 (MQ=255)

      tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTATTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                                              >  1:3621366‑M1/1‑93 (MQ=255)

       gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                >  1:2081770‑M1/1‑92 (MQ=255)

       gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                                             >  2:3356684/1‑100 (MQ=255)

        aaaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTGTTATCCGACCTACGGGGGCGCATGTGTAGgccggcta                                                                                             >  1:2141221‑M1/1‑91 (MQ=255)

         aaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                                           >  1:1615375/1‑100 (MQ=255)

          aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                                          <  2:3008670/100‑1 (MQ=255)

             aTTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                                                                       <  1:810340/100‑1 (MQ=255)

               tGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                                     <  2:156690/100‑1 (MQ=255)

                    aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                                                >  1:560885/1‑100 (MQ=255)

                    aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                                                <  1:2725990/100‑1 (MQ=255)

                     tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  2:1518942/100‑1 (MQ=255)

                     tGTAGGTGGGCTACTGTGCCTAAAATGTCGGAGGCGACGCTGGCGCCTCTTATCCGACCTACGGGGACGCATGTGTATGCCGGATAAGGCGTTTAcgccg                                                                               <  1:1474501/100‑1 (MQ=255)

                       tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                                             <  1:2674964‑M2/100‑1 (MQ=255)

                       tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                                             <  2:197295‑M2/100‑1 (MQ=255)

                          gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGaccggatgcggcgtaaacgccttatcc                                                                          <  1:3338070‑M1/100‑28 (MQ=255)

                          gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                                          <  1:2583099‑M2/100‑1 (MQ=255)

                          gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                                          <  1:1737915‑M2/100‑1 (MQ=255)

                          gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCCCCCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  2:1048861‑M1/100‑28 (MQ=255)

                           tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccg                                                                         <  1:673415‑M1/100‑29 (MQ=255)

                            gggCTACTGTGCTTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCG                                                                         >  2:1290795‑M2/1‑99 (MQ=255)

                             ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                       <  1:533823‑M2/100‑1 (MQ=255)

                             ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                                       >  2:2674981‑M2/1‑100 (MQ=255)

                              gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  1:3235900‑M1/100‑32 (MQ=255)

                               cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcct                                                                     <  1:435984‑M1/100‑33 (MQ=255)

                               cTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcct                                                                     <  2:1314893‑M1/100‑33 (MQ=255)

                               cTACTGTGCCTAAAATGTCCGATGCGACGCTGACGCGTCTTATCCGACCTACGTGGACGCATGTTTAGGCCGGATAAGGCGTTTACGCCGCATCCGGtca                                                                     <  1:133525‑M2/100‑4 (MQ=255)

                                 aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                   >  2:2102201/1‑100 (MQ=255)

                                  cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                                                  <  2:1459165/100‑1 (MQ=255)

                                  cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                                                  <  1:3178523/100‑1 (MQ=255)

                                    gtgGCTAAAATGTCGGATGCGACGCTGGCGCGTCTTAGCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                <  2:2588216/100‑1 (MQ=255)

                                    gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                <  2:3248512/100‑1 (MQ=255)

                                    gtgCCTAAAATGGCGGGTGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                                                    <  1:28913/96‑1 (MQ=255)

                                      gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcctacacatg                                                              <  1:432063‑M1/100‑40 (MQ=255)

                                       ccTAAAATGTCGGATGCGCCGCTGACTCGTCTTATCCGACCTACCGGGACCGATGTGTAGCCCGGATACGGCGTTTACGCCGCATCCGGCAATGgtgt                                                               <  1:1877061/98‑1 (MQ=17)

                                       ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                                             >  2:3136080/1‑100 (MQ=255)

                                       ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                                             >  2:3735547/1‑100 (MQ=255)

                                        cTAAAATGTCGGATGCGACGTTGGCGCGTCTTATCCGACCTACGCGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                                            <  1:3415681/100‑1 (MQ=255)

                                         tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAACTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                                           >  1:1992730/1‑100 (MQ=255)

                                           aaaaatacgATGAGACGCTGGCACGTCATATCCGACATACGGGAACGCATGTGTAGGCCGGATAAAGCGTTTACGCCGCATCCGGCAATGGTGTCCAAAt                                                         <  1:440665/92‑1 (MQ=18)

                                              tggcgcacgCGACGCTGGCGCGTCTTATCCGACCTACGGGGCCGCATGTGTAGGCCGGATAAGGCGTGTACGCCACATCCGGCAATGGTGTCCAAATg                                                        <  1:3241424/90‑1 (MQ=18)

                                                tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGTACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                                                    <  1:2030301/100‑1 (MQ=255)

                                                tCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                                                    <  1:2572112/100‑1 (MQ=255)

                                                 cGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAaca                                                   >  2:1745760/1‑100 (MQ=255)

                                                    aTGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGt                                                >  1:1263948/1‑100 (MQ=255)

                                                        gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                                             <  1:2929800/99‑1 (MQ=255)

                                                         aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           >  2:3188177/1‑100 (MQ=255)

                                                         aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           >  2:3221666/1‑100 (MQ=255)

                                                         aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           >  2:3079038/1‑100 (MQ=255)

                                                           gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                                              <  2:18097/95‑1 (MQ=255)

                                                             tGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGt                                       <  2:2579011/100‑1 (MQ=255)

                                                               gcgcGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTc                                     <  1:2200321/100‑1 (MQ=255)

                                                                cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                                    >  2:2895618/1‑100 (MQ=255)

                                                                  cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg                                  <  1:1005987/100‑1 (MQ=255)

                                                                  cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg                                  <  2:1737922/100‑1 (MQ=255)

                                                                    tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                <  1:3662115/100‑1 (MQ=255)

                                                                    tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                >  2:2720143/1‑100 (MQ=255)

                                                                    tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                <  2:3647769/100‑1 (MQ=255)

                                                                     cTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACt                               <  1:2501021/100‑1 (MQ=255)

                                                                      ttATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt                              <  2:442286/100‑1 (MQ=255)

                                                                       tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc                             <  1:3596724/100‑1 (MQ=255)

                                                                       tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc                             >  1:2156534/1‑100 (MQ=255)

                                                                        aTCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa                            >  2:218470/1‑100 (MQ=255)

                                                                        aTCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa                            >  2:3072796/1‑100 (MQ=255)

                                                                          ccGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAcc                          >  2:3665551/1‑100 (MQ=255)

                                                                           cGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc                         <  2:1615382/100‑1 (MQ=255)

                                                                           cGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc                         <  1:3189199/100‑1 (MQ=255)

                                                                            gccatACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCg                        <  1:1801706/96‑1 (MQ=255)

                                                                             aCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGc                       >  1:1612449/1‑100 (MQ=255)

                                                                             aCCTACGGGGACGCATGTGAGGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCTTTCTGGACTTCACCCg                        <  1:1442438/99‑1 (MQ=255)

                                                                              ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGc                       >  1:2914263/1‑99 (MQ=255)

                                                                              ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt                      >  1:3315511/1‑100 (MQ=255)

                                                                                tACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTaa                    >  2:2993680/1‑100 (MQ=255)

                                                                                tACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTaa                    >  1:74434/1‑100 (MQ=255)

                                                                                tACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTaa                    >  1:3438876/1‑100 (MQ=255)

                                                                                 aCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAc                   >  2:2966802/1‑100 (MQ=255)

                                                                                 aCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAc                   >  2:3468291/1‑100 (MQ=255)

                                                                                  cGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                  >  2:682771/1‑100 (MQ=255)

                                                                                  cGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                  <  2:560887/100‑1 (MQ=255)

                                                                                  cGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                  >  1:2255666/1‑100 (MQ=255)

                                                                                  cGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                  <  1:1526419/100‑1 (MQ=255)

                                                                                        cGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAAcgcg            <  2:533825/100‑1 (MQ=255)

                                                                                          cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCTGTTCTGGACTTCACCCGTTAACCAACGcgcc          <  2:2514046/100‑1 (MQ=255)

                                                                                          cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:852597/1‑100 (MQ=255)

                                                                                          cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:3364668/1‑100 (MQ=255)

                                                                                          cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:3607077/1‑100 (MQ=255)

                                                                                          cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:1406474/1‑100 (MQ=255)

                                                                                          cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTCTTATCCGTTCTGGACTTCACCCGCTAACCAACgcgc           >  1:3388176/1‑99 (MQ=255)

                                                                                            tgtgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccgc        >  2:1138732/1‑100 (MQ=255)

                                                                                            tgtgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccgc        <  1:2090399/100‑1 (MQ=255)

                                                                                              tgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcag      <  1:3007447/100‑1 (MQ=255)

                                                                                              tgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcag      <  1:2779608/100‑1 (MQ=255)

                                                                                                tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagca    >  2:911562/1‑100 (MQ=255)

                                                                                                  ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAt  >  1:982168/1‑100 (MQ=255)

                                                                                                  ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAt  >  2:2443413/1‑100 (MQ=255)

GATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAT  >  NC_000913/2835020‑2835217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.