New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3619833 =	NA (NA)	5 (0.040)	3/166	NT	100%	coding (642/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3619856 =	0 (0.000)					coding (665/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCG  >  NC_000913/3619757‑3619955                                                                                                    |                                                                                                    agccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggt                                                                                                     <  1:1051005‑M2/1‑1 (MQ=255) agccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggt                                                                                                     <  2:1032577‑M2/1‑1 (MQ=255) agccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggt                                                                                                     <  2:1070043‑M2/1‑1 (MQ=255)  gccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggt                                                                                                     <  1:3088366‑M2/1‑1 (MQ=255)  gccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTc                                                                                                    <  2:89747‑M2/2‑1 (MQ=255)  gccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTc                                                                                                    >  2:1286231‑M2/99‑100 (MQ=255)  gccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTc                                                                                                    >  2:3560473‑M2/99‑100 (MQ=255)  gccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTc                                                                                                    >  2:1707099‑M2/99‑100 (MQ=255)   gcggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaagtcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   <  1:3626474‑M2/3‑1 (MQ=255)   ccggaagtggcgccgggcaccatccggcgcgccggggagttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   <  1:2592483‑M2/3‑1 (MQ=255)   ccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   <  1:1707092‑M2/3‑1 (MQ=255)   ccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   >  1:2836697‑M2/98‑100 (MQ=255)   ccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   <  2:578598‑M2/3‑1 (MQ=255)   ccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   <  1:1909667‑M2/3‑1 (MQ=255)   ccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTc                                                                                                    >  1:2401437‑M2/98‑99 (MQ=255)    cggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTcc                                                                                                   <  1:3427900‑M2/3‑1 (MQ=255)    cggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCa                                                                                                  >  1:2506088‑M2/97‑100 (MQ=255)    cggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCa                                                                                                  <  2:1370026‑M2/4‑1 (MQ=255)    cggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCa                                                                                                  >  1:353487‑M2/97‑100 (MQ=255)     ggcagtggcgccaggctccagccgtcacgccggtgattgcgccgctgaattcaccggcggcgtcgcggtggaacgtctgtgtgcgcccgaagcggt                                                                                                     <  1:474593‑M2/1‑1 (MQ=255)     ggaagtgacgccaggcaccatccgtcacggcggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCcan                                                                                                 <  2:877278‑M2/5‑2 (MQ=255)     ggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTc                                                                                                    >  1:1462469‑M2/96‑97 (MQ=255)     ggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCAc                                                                                                 >  1:444047‑M2/96‑100 (MQ=255)     ggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCAc                                                                                                 <  1:679061‑M2/5‑1 (MQ=255)      ggagtgacgccaggcaccatccggcacgccggtgaattcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCAcc                                                                                                <  1:198829‑M2/6‑1 (MQ=255)      gaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCAcc                                                                                                <  1:2962612‑M2/6‑1 (MQ=255)      gaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCAcc                                                                                                <  2:1713482‑M2/6‑1 (MQ=255)      gaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaattcaccggcggcttcgcggtggaacgtctgtgtgcgcccgaagcggTCCAcc                                                                                                <  2:2244123‑M2/6‑1 (MQ=255)                                                                    cgcggtggaacgtctgtgtgcgcccgcagcggTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCCGCCTGACGGATGGTGCCTGTCGTCAc                                  >  2:1147825‑M2/33‑100 (MQ=255)                                                                    cgcggtggaacgtctgtgtgcgcccgaagcggTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCAc                                  >  2:1147815‑M2/33‑100 (MQ=255)                                                                     gcggtggaacgtctgtgtgcgcccgaagcggTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACt                                 >  1:1513066‑M2/32‑100 (MQ=255)                                                                      cggtggaacgtctgtgtgcgcccgaagcggTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACtt                                >  1:2770078‑M2/31‑100 (MQ=255)                                                                       ggtggaacgtctgtgtgcgcccgaagcggTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTc                               >  1:1783961‑M2/30‑100 (MQ=255)                                                                                                    TCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg  <  2:1892050‑M2/100‑1 (MQ=255)                                                                                                    TCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg  >  2:2831967‑M2/1‑100 (MQ=255)                                                                                                    TCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg  >  2:3100239‑M2/1‑100 (MQ=255)                                                                                                    TCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg  >  1:2401059‑M2/1‑100 (MQ=255)                                                                                                    TCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg  <  2:436218‑M2/100‑1 (MQ=255)                                                                                                    TCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg  >  1:370483‑M2/1‑100 (MQ=255)                                                                                                    |                                                                                                    GTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCG  >  NC_000913/3619757‑3619955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.