New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3620569 =	NA (NA)	14 (0.110)	7/166	NT	100%	coding (1378/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3620582 =	0 (0.000)					coding (1391/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCA  >  NC_000913/3620483‑3620681                                                                                                    |                                                                                                    caattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcc                                                                                                     >  2:454342‑M2/100‑100 (MQ=255) caattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcc                                                                                                     <  2:2390665‑M2/1‑1 (MQ=255) caattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcc                                                                                                     <  1:3160967‑M2/1‑1 (MQ=255)  aattcatcatattcccggcgcaattccagcccgtccggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCg                                                                                                    >  1:1410362‑M2/99‑100 (MQ=255)  aattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCg                                                                                                    >  1:1169838‑M2/99‑100 (MQ=255)  aattcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCg                                                                                                    >  2:2214426‑M2/99‑100 (MQ=255)     tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 <  2:3041853‑M2/5‑1 (MQ=255)     tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 <  2:2945836‑M2/5‑1 (MQ=255)     tcatcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 <  2:2943886‑M2/5‑1 (MQ=255)     tcatcatattcccggcgcaatggcagcccgtcaggcccgtttgctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCg                                                                                                 <  1:3161625‑M2/5‑1 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtgtctgccgttaactggttgtggtggttctagtcaaaagccgatgccctgccatcCGGCg                                                                                                 >  1:296062‑M2/95‑99 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCGt                                                                                                <  1:818285‑M2/6‑1 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCGt                                                                                                >  2:1013683‑M2/95‑100 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCGt                                                                                                <  2:1055786‑M2/6‑1 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCGt                                                                                                >  2:2124602‑M2/95‑100 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCGt                                                                                                >  1:2892667‑M2/95‑100 (MQ=255)      catcatattcccggcgcaattccagcccgtcaggcccggtggctgacgttaactggttgtggtggttatagtaaaacgccgatgccctgccatcCGGCGt                                                                                                >  1:2690943‑M2/95‑100 (MQ=255)                                                                 tggtggttatagtaaaacgcagatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGAGCtggaaata                                     >  1:2288782‑M2/36‑97 (MQ=255)                                                                  ggtggttatagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGACTTgc                                    >  1:732455‑M2/35‑100 (MQ=255)                                                                        atctgtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCggg                              <  2:2042470‑M2/72‑1 (MQ=255)                                                                         atagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGa                             >  2:691235‑M2/28‑100 (MQ=255)                                                                          tagtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGaa                            >  1:1601312‑M2/27‑100 (MQ=255)                                                                           agtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAat                           >  2:560200‑M2/26‑100 (MQ=255)                                                                            gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAata                          >  2:2954472‑M2/25‑100 (MQ=255)                                                                            gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          >  1:424481‑M2/25‑100 (MQ=255)                                                                            gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          >  1:1179272‑M2/25‑100 (MQ=255)                                                                            gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAata                          >  1:2073406‑M2/25‑100 (MQ=255)                                                                            gtaaaacgccgatgccctgccatcCGGCGTTTTACTATAACAACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCgggagat                          >  1:2042460‑M2/25‑97 (MQ=255)                                                                             taaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAatat                         >  1:366572‑M2/24‑100 (MQ=255)                                                                              aaaacgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatg                        >  2:2025737‑M2/23‑100 (MQ=255)                                                                                 acgccgatgccctgccatcCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATatgat                      >  1:825351‑M2/20‑99 (MQ=255)                                                                                                    CGGCGTTTTACTATACCCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCa  <  1:1135883‑M2/100‑1 (MQ=255)                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCa  >  2:2615205‑M2/1‑100 (MQ=255)                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCa  >  1:3191970‑M2/1‑100 (MQ=255)                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCa  >  1:507568‑M2/1‑100 (MQ=255)                                                                                                    CGGCGTTTTACTACACCCACCACAACAAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGAAATATGATGAATTGGGCCGTCTGATTc   <  1:2607058‑M2/99‑1 (MQ=255)                                                                                                    |                                                                                                    TCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCA  >  NC_000913/3620483‑3620681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.