New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3621366 =	NA (NA)	21 (0.170)	8/166	NT	100%	coding (2175/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3621378 =	0 (0.000)					coding (2187/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACG  >  NC_000913/3621279‑3621477                                                                                                    |                                                                                                    tgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcc                                                                                                     >  2:1411085‑M2/100‑100 (MQ=255) tgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcc                                                                                                     >  2:1745651‑M2/100‑100 (MQ=255) tgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcc                                                                                                     <  2:2128368‑M2/1‑1 (MQ=255) tgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcc                                                                                                     >  2:2562332‑M2/100‑100 (MQ=255) tgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcc                                                                                                     >  2:2655368‑M2/100‑100 (MQ=255)  gcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcca                                                                                                    >  1:1483529‑M2/99‑100 (MQ=255)  gcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagcca                                                                                                    >  2:355013‑M2/99‑100 (MQ=255)   caccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccag                                                                                                   >  1:1383056‑M2/98‑100 (MQ=255)   caccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccag                                                                                                   >  1:140695‑M2/98‑100 (MQ=255)   caccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccag                                                                                                   <  2:498043‑M2/3‑1 (MQ=255)   caccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccag                                                                                                   >  1:1767744‑M2/98‑100 (MQ=255)   caccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccag                                                                                                   >  2:3591709‑M2/98‑100 (MQ=255)    accgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgccccgccacccggtgcccttcactgatctggctgatgtctgtctgccagc                                                                                                  >  1:1553946‑M2/97‑100 (MQ=255)    accgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccagc                                                                                                  <  2:1405511‑M2/4‑1 (MQ=255)     ccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccagcc                                                                                                 <  1:1206571‑M2/5‑1 (MQ=255)     ccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccagcc                                                                                                 >  2:2667892‑M2/96‑100 (MQ=255)      cgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcgccgccacccggtgcgcttcgctgagatggctgatgtctgtcagccagcca                                                                                                <  1:419540‑M2/6‑1 (MQ=255)      cgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccagcca                                                                                                <  2:2584933‑M2/6‑1 (MQ=255)      cgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccacccggtgcccttcgctgatatggctgatgtctgtcagccagcca                                                                                                <  2:140697‑M2/6‑1 (MQ=255)                                                                        ttcgctgatatggctgatgtctgtcagcCAGCCATATCAGCGAAGAGCACCGGGTGGCGGTGCATTACAGGTATGATGAGCAAGGCCGGCTGACCGGt                                >  1:421935‑M2/29‑98 (MQ=255)                                                                           gctgatatggctgatgtctgtcagcCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCg                           >  2:2823004‑M2/26‑100 (MQ=255)                                                                           gctgatatggctgatgtctgtcagcCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCg                           >  1:128313‑M2/26‑100 (MQ=255)                                                                           gctgatatggctgatgtctgtcagcCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCg                           >  2:1080903‑M2/26‑100 (MQ=255)                                                                            ctgatatggctgatgtctgtcagcCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGt                          >  1:2353534‑M2/25‑100 (MQ=255)                                                                              gatatggctgatgtctgtcagcCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCa                        >  2:2827304‑M2/23‑100 (MQ=255)                                                                               gctgatatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAg                       >  2:1895733‑M2/22‑100 (MQ=255)                                                                                ctgatatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGa                      >  2:595290‑M2/21‑100 (MQ=255)                                                                                ctgatatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGa                      >  2:2671970‑M2/21‑100 (MQ=255)                                                                                  gatatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACg                    >  2:665030‑M2/19‑100 (MQ=255)                                                                                  gatatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACg                    >  2:13444‑M2/19‑100 (MQ=255)                                                                                  gatatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGCGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACg                    >  1:1698771‑M2/19‑100 (MQ=255)                                                                                   atatggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACgg                   >  2:41191‑M2/18‑100 (MQ=255)                                                                                    tatggctgatgtctgtCAGCCATATCAGCGAAGGGCACGGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGGCGGCTGACCGGTGAGCGTCAGACg                    >  2:3116617‑M2/17‑98 (MQ=255)                                                                                     atggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTg                 >  2:1189543‑M2/16‑100 (MQ=255)                                                                                     atggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTg                 >  2:431257‑M2/16‑100 (MQ=255)                                                                                     atggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTg                 >  2:1278594‑M2/16‑100 (MQ=255)                                                                                     atggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGGGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTg                 >  1:3515622‑M2/16‑100 (MQ=255)                                                                                      tggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGc                >  2:2702025‑M2/15‑100 (MQ=255)                                                                                      tggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGc                >  2:1218096‑M2/15‑100 (MQ=255)                                                                                      tggctgatgtctgtCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGc                >  2:3731311‑M2/15‑100 (MQ=255)                                                                                                    CAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACg  <  1:940714‑M2/100‑1 (MQ=255)                                                                                                    CAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACg  <  1:3690703‑M2/100‑1 (MQ=255)                                                                                                    CAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACg  >  2:3156661‑M2/1‑100 (MQ=255)                                                                                                    CAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCATTACGGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACg  >  2:1862768‑M2/1‑100 (MQ=255)                                                                                                    |                                                                                                    CTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACG  >  NC_000913/3621279‑3621477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.