| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4035360 | NA (NA) | 18 (0.150) | 8/166 | NT | 100% | intergenic (+207/‑171) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
| ? | NC_000913 | = 4035384 | 0 (0.000) | intergenic (+231/‑147) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGT > NC_000913/4035285‑4035482 | tcttgagAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGTAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:2070214‑M2/4‑100 (MQ=255)tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGTCTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:1490874‑M2/1‑100 (MQ=255)tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:938991‑M2/1‑100 (MQ=255)tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 1:238323‑M2/100‑1 (MQ=255)tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:3390310‑M2/1‑100 (MQ=255)tcCTCAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:740426‑M2/1‑100 (MQ=255) cTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTATGTAGCGGGAAGGCGTATTATGCACACCCCGCGCAGCTGAAAAAAAGCGAAGCGGC > 1:536179‑M2/1‑98 (MQ=255) aCTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaag < 2:1310373‑M2/100‑41 (MQ=255) gCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatt < 2:975120‑M2/100‑49 (MQ=255) cGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttc > 1:975115‑M2/1‑43 (MQ=255) cacaCCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgcc < 1:1672413‑M2/97‑64 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 2:1491413‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 2:2249665‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 2:212727‑M2/100‑71 (MQ=255) ccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 2:206759‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 2:3100203‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAACCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:842492‑M2/98‑71 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacggagtaaagcatttatttttgctttctctgtcggagttctc < 1:3474178‑M2/99‑73 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:3499889‑M2/100‑74 (MQ=255) gcgcCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 2:3468672‑M2/100‑75 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:589169‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:3451670‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagtactcagg < 1:3330906‑M2/100‑76 (MQ=255) gccgcTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagga < 2:2336145‑M2/100‑77 (MQ=255) ccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggag < 2:3726680‑M2/100‑78 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc < 1:2761758‑M2/100‑95 (MQ=255) cggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcgg > 2:2444733‑M2/1‑4 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggc < 2:1304674‑M2/100‑98 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggc < 1:791733‑M2/100‑98 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggaggtctcgggagaaccccgctgacccggcggc < 1:1130565‑M2/100‑98 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 1:3629216‑M2/1‑2 (MQ=255) | TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGT > NC_000913/4035285‑4035482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |