New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4166489 =NA (NA)7 (0.050) 4/178 NT NA intergenic (+204/‑170) murI/rrsB glutamate racemase/16S ribosomal RNA of rrnB operon
?NC_000913 4208001 = NA (NA)intergenic (‑469/‑146) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

Only 100 of 177 total aligned reads displayed.

GGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTC  >  NC_000913/4207902‑4208090
                                                                                                   |                                                                                         
ggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCaa                                                                                           >  1:1608668/1‑100 (MQ=255)
 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                                          <  2:2350329/100‑1 (MQ=255)
   tcggttGAAGAGAAAAATCCTGAAATTTAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCGCCTCGCGACAGTGCGCTAAAGCGCGTCGCAACt                                                                                         <  1:1027568/99‑1 (MQ=255)
   tcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTg                                                                                        <  2:1968994/100‑1 (MQ=255)
   tcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTg                                                                                        >  2:1607421/1‑100 (MQ=255)
   tcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTg                                                                                        >  2:1288223/1‑100 (MQ=255)
     ggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGct                                                                                      >  2:1055486/1‑100 (MQ=255)
        tGAAGAGAAAAATCCTGAAATTCAGGGTTGACCCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCCCtt                                                                                   <  1:1438209/100‑1 (MQ=255)
          ctgagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTa                                                                                 <  2:2046421/98‑1 (MQ=255)
           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                                                <  1:10560/100‑1 (MQ=255)
           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                                                <  2:1928398/100‑1 (MQ=255)
           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                                                >  2:3389711/1‑100 (MQ=255)
           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                                                >  2:50851/1‑100 (MQ=255)
            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAACGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaag                                                                               >  1:2046411/1‑99 (MQ=255)
            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                                               >  2:3615770/1‑100 (MQ=255)
              gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                                             >  1:2535545/1‑100 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATATGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                                           <  1:3028841/100‑1 (MQ=255)
                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                                           <  2:1475635/100‑1 (MQ=255)
                  aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTa                                                                         <  1:1362701/100‑1 (MQ=255)
                    tCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCCACTGCTCTTTAACAATTTATc                                                                       >  1:3319466/1‑100 (MQ=255)
                    tCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATc                                                                       <  2:2347849/100‑1 (MQ=255)
                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                                      <  2:2204470/100‑1 (MQ=255)
                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAGTTATCa                                                                      >  2:3355310/1‑100 (MQ=255)
                      cTGAAATTCAGGGTTGACTCTGAAAGAGGCAAGCGTAATATCCGCCACATCGCGACAGTGCACTAAAGCGCGTCGCAACTGCTCTTTAACAATTTAtaac                                                                     >  1:2831142/1‑97 (MQ=14)
                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                                     <  1:2658856/100‑1 (MQ=255)
                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                                     <  1:1267343/100‑1 (MQ=255)
                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                                     >  1:58848/1‑100 (MQ=255)
                        gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                                   <  1:868568/100‑1 (MQ=255)
                        gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                                   <  2:782131/100‑1 (MQ=255)
                          aaTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACaa                                                                 >  2:3411279/1‑100 (MQ=255)
                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                                                >  1:855408/1‑100 (MQ=255)
                            ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATc                                                               <  1:1232878/100‑1 (MQ=255)
                             tCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTATCAATTTATAAGACAATCt                                                              >  1:3095851/1‑100 (MQ=255)
                              cAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtg                                                             <  2:1201098/100‑1 (MQ=255)
                                gggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtg                                                           <  2:2602564/100‑1 (MQ=255)
                                  gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                                         <  1:3411255/100‑1 (MQ=255)
                                  gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                                         <  2:3122368/100‑1 (MQ=255)
                                    tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                                       <  2:1539783/100‑1 (MQ=255)
                                    ccgatctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                                       <  1:383046/96‑1 (MQ=255)
                                     gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                                      >  2:346351/1‑100 (MQ=255)
                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                                     >  1:2073571/1‑100 (MQ=255)
                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                                     <  1:29157/100‑1 (MQ=255)
                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTACCAATTTATCAGACAATCTGTGTGGGc                                                      <  2:431189/98‑1 (MQ=255)
                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                                  >  2:2570243/1‑100 (MQ=255)
                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                                  >  2:1071634/1‑100 (MQ=255)
                                          tGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg                                                 <  2:3121666/100‑1 (MQ=255)
                                            aaaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGaa                                               <  2:3530839/100‑1 (MQ=255)
                                             aaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                                              >  2:3346001/1‑100 (MQ=255)
                                               gagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGAt                                            <  2:911482/100‑1 (MQ=255)
                                                agGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATa                                           <  2:462743/100‑1 (MQ=255)
                                                 ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                                          <  1:1747644/100‑1 (MQ=255)
                                                  gAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACg                                         <  2:3465174/100‑1 (MQ=255)
                                                   aaaGCGTAATATAAGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTTCTCTTTAACAATTTATCAGACAATCTTTGTGGGCACTCGAAGATACg                                         <  1:2573412/99‑1 (MQ=255)
                                                    aaGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGa                                       >  1:2474552/1‑100 (MQ=255)
                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                                      <  1:439719/100‑1 (MQ=255)
                                                      gCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACGATCTGTGTGGGCACTCGAAGATACGGAtt                                     >  2:694338/1‑100 (MQ=255)
                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                                   <  2:2940341/100‑1 (MQ=255)
                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                                   >  1:3258244/1‑100 (MQ=255)
                                                         tAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                                  <  1:1420984/100‑1 (MQ=255)
                                                         tAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                                  <  2:3192015/100‑1 (MQ=255)
                                                          aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                                 >  1:28991/1‑100 (MQ=255)
                                                          aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                                 <  2:847077/100‑1 (MQ=255)
                                                          aaTATACACCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                                 <  2:3113590/100‑1 (MQ=255)
                                                           atatACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa                                >  2:99312/1‑100 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               <  1:304284/100‑1 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               <  2:2432527/100‑1 (MQ=255)
                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc                               <  2:1390373/100‑1 (MQ=255)
                                                             ataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACg                              >  2:2015477/1‑100 (MQ=255)
                                                               aCGCTACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGATAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTc                            <  1:1596480/100‑1 (MQ=255)
                                                               aCGCCACCTCGCGACAGTGCGCTAAAGCGTGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTc                            <  2:1498560/100‑1 (MQ=255)
                                                               aCGCAACATCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAATCGAAGATACGGATTCTTAACGTc                            >  1:878904/1‑100 (MQ=255)
                                                                cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg                           >  2:320625/1‑100 (MQ=255)
                                                                 gCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc                          >  2:382192/1‑100 (MQ=255)
                                                                 gCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc                          <  2:2474566/100‑1 (MQ=255)
                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa                         >  2:1823269/1‑100 (MQ=255)
                                                                    aCCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAg                       >  2:964878/1‑100 (MQ=255)
                                                                     ccTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGa                      <  2:1739858/100‑1 (MQ=255)
                                                                          cgACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaaa                 >  2:1598051/1‑100 (MQ=255)
                                                                            aCAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaaaaa               <  1:151148/100‑1 (MQ=255)
                                                                             cAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt              <  2:1263004/100‑1 (MQ=255)
                                                                             cAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAAt              >  1:1988000/1‑100 (MQ=255)
                                                                              aGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGaaaa                <  2:580715/97‑1 (MQ=255)
                                                                               gTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGa            >  2:2158702/1‑100 (MQ=255)
                                                                               gTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGa            >  1:1004691/1‑100 (MQ=255)
                                                                                 gcgcTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAAt          <  1:3567873/100‑1 (MQ=40)
                                                                                 gcgcTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAAt          <  2:2085839/100‑1 (MQ=40)
                                                                                  cgcTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATa         >  2:2249099/1‑100 (MQ=38)
                                                                                   ncTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAc        >  1:1897390/2‑100 (MQ=25)
                                                                                   gcTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAc        >  1:1226498/1‑100 (MQ=38)
                                                                                    cTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGACGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAcc       >  1:3007356/1‑100 (MQ=25)
                                                                                    cTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAcc       >  1:2323362/1‑100 (MQ=35)
                                                                                    cTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAcc       >  1:988401/1‑100 (MQ=35)
                                                                                    cTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATAcc       <  1:1133966/100‑1 (MQ=35)
                                                                                     tAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTCAAGTCGCAAGACGAAAAATGAATACCa      >  2:3453040/1‑100 (MQ=255)
                                                                                      aaaGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCaa     >  2:2406346/1‑100 (MQ=33)
                                                                                       aaGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAg    <  2:3711098/100‑1 (MQ=32)
                                                                                        aGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGt   <  2:2073581/100‑1 (MQ=31)
                                                                                         gcgcGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtc  <  1:2288675/100‑1 (MQ=11)
                                                                                         gcgcGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGtc  <  1:1873729/100‑1 (MQ=11)
                                                                                         gcgcGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGt   >  2:3625749/1‑99 (MQ=11)
                                                                                                   |                                                                                         
GGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTC  >  NC_000913/4207902‑4208090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.