New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4631582 =150 (1.140)4 (0.030) 4/168 NT 2.8% coding (850/1938 nt) slt lytic murein transglycosylase, soluble
?NC_000913 4631612 = 133 (1.070)coding (880/1938 nt) slt lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 169 total aligned reads displayed.

CGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCG  >  NC_000913/4631513‑4631711
                                                                                                   |                                                                                                   
cGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                                                     <  2:1995850/100‑1 (MQ=255)
cGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                                                     <  1:2605569/100‑1 (MQ=255)
 tcaataagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGt                                                                                                    >  1:1728077‑M1/69‑100 (MQ=255)
  gCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTc                                                                                                   >  2:3502379/1‑100 (MQ=255)
  gCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTc                                                                                                   >  2:117775/1‑100 (MQ=255)
   cTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCa                                                                                                  >  2:1604831/1‑100 (MQ=255)
     gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                                                <  2:923736/100‑1 (MQ=255)
     gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                                                <  2:2247828/100‑1 (MQ=255)
      atgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcg                                                                                               >  1:900358/1‑100 (MQ=255)
      atgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcg                                                                                               >  1:1095700/1‑100 (MQ=255)
      atgatCCCATCGCTAGCCCAGGCGCAGCAGCTTGATCAATTTCTGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGCTGTCACcg                                                                                               <  1:2356866/100‑1 (MQ=255)
        gatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcgac                                                                                             <  2:3190849/100‑1 (MQ=255)
        gatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcgac                                                                                             >  1:1486869/1‑100 (MQ=255)
        gatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcgac                                                                                             <  1:2337315/100‑1 (MQ=255)
          tCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcgacga                                                                                           <  1:2710721/100‑1 (MQ=255)
            ccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGc                                                                                         >  2:2819430/1‑100 (MQ=255)
             cATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                                                        >  2:443836/1‑100 (MQ=255)
              aTCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAg                                                                                       >  1:1182995/1‑100 (MQ=255)
               tCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAgg                                                                                      <  1:467921/100‑1 (MQ=255)
                 gCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCg                                                                                    <  2:2537157/100‑1 (MQ=255)
                    tGCCCAGGCACAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGaaa                                                                                 >  2:1629052/1‑100 (MQ=255)
                     gCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAAt                                                                                >  1:814830/1‑100 (MQ=255)
                      gagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                                               >  1:1753065‑M1/48‑100 (MQ=255)
                      cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                                               <  1:218850/100‑1 (MQ=255)
                      cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGACTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                                               >  1:1698788/1‑100 (MQ=255)
                      cccAGGCGCAGAAGCTTAATGAAGAGCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                                               >  1:3033226/1‑100 (MQ=255)
                       ccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATgg                                                                              <  1:674728/100‑1 (MQ=255)
                       ccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATgg                                                                              <  2:400620/100‑1 (MQ=255)
                        cAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgc                                                                             >  1:3645667/1‑100 (MQ=255)
                         aGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgcg                                                                            <  1:2927285/100‑1 (MQ=255)
                          ggCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgcgc                                                                           <  2:610060/100‑1 (MQ=255)
                          ggCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgcgc                                                                           <  2:1430275/100‑1 (MQ=255)
                            ataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGcgcg                                                                          >  1:972248‑M1/42‑99 (MQ=255)
                                       aaTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTa                                                              >  2:3680062/1‑100 (MQ=255)
                                       aaTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTa                                                              <  2:3308874/100‑1 (MQ=255)
                                       aaTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTa                                                              >  1:215496/1‑100 (MQ=255)
                                        aTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTAt                                                             >  1:3011471/1‑100 (MQ=255)
                                         tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                                                            <  1:1870466/100‑1 (MQ=255)
                                         tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                                                            <  2:1844912/100‑1 (MQ=255)
                                         cgcgccatttcgcctgctcgtcggtgacatcgttgcccatcaaacgccaggcgacgatGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTAt                                                             >  1:972248‑M2/59‑99 (MQ=255)
                                             gATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCt                                                        <  1:3649463/100‑1 (MQ=255)
                                              catttcgcctgctcgtcggtgacatcgttgcccatcaaacgccaggcgacgatGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTc                                                       >  1:1753065‑M2/54‑100 (MQ=255)
                                               tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                                                      >  1:519488/1‑100 (MQ=255)
                                               tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                                                      <  1:2097534/100‑1 (MQ=255)
                                               tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                                                      <  2:2647519/100‑1 (MQ=255)
                                                cAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGc                                                     <  2:1807859/100‑1 (MQ=255)
                                                    ttCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCCTTATGCGCTCGCAATc                                                 >  2:2193809/1‑100 (MQ=255)
                                                    ttCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATc                                                 <  2:207283/100‑1 (MQ=255)
                                                    ttCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATc                                                 <  2:207920/100‑1 (MQ=255)
                                                     tCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCt                                                <  1:1629045/100‑1 (MQ=255)
                                                     tCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCt                                                <  1:443834/100‑1 (MQ=255)
                                                       nggAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTAc                                              >  1:1691533/2‑100 (MQ=255)
                                                       aGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTAc                                              >  2:75478/1‑100 (MQ=255)
                                                       aGGAGCTGCGCGAGCTCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTAc                                              <  1:2286329/100‑1 (MQ=255)
                                                        ggAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTAc                                              >  1:875618/1‑99 (MQ=255)
                                                          aGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTc                                           <  1:1086077/100‑1 (MQ=255)
                                                          aGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTc                                           <  2:423135/100‑1 (MQ=255)
                                                           gCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCg                                          >  2:363793/1‑100 (MQ=255)
                                                             tGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCt                                        >  1:2082915/1‑100 (MQ=255)
                                                             tGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCt                                        >  1:706592/1‑100 (MQ=255)
                                                              ttccgATCTCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCtt                                       <  2:3252650/97‑1 (MQ=255)
                                                                gcgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAt                                     <  1:3310498/100‑1 (MQ=255)
                                                                 cgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAtt                                    <  2:1288524/100‑1 (MQ=255)
                                                                 cgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAtt                                    <  1:346437/100‑1 (MQ=255)
                                                                 cgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAtt                                    <  2:2967047/100‑1 (MQ=255)
                                                                 caatatCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAtt                                    <  1:1600631/98‑1 (MQ=255)
                                                                  gATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTg                                   <  2:273096/100‑1 (MQ=255)
                                                                  gATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTg                                   <  2:2411134/100‑1 (MQ=255)
                                                                     ATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAc                                >  1:2417079‑M1/1‑100 (MQ=255)
                                                                       CGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTActtcgcttagatcggaa                              <  1:3252628‑M1/100‑9 (MQ=255)
                                                                        GTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGcc                             <  1:561996‑M1/100‑1 (MQ=255)
                                                                          cgCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCgt                           <  1:857270/100‑1 (MQ=255)
                                                                          cgCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCgt                           <  2:1332746/100‑1 (MQ=255)
                                                                          cgCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCgt                           <  1:2010445/100‑1 (MQ=255)
                                                                            ccTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCgtgt                         <  2:69003/100‑1 (MQ=255)
                                                                            ccTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCgtgt                         <  2:2172641/100‑1 (MQ=255)
                                                                              tGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTAc                       <  2:2188266/100‑1 (MQ=255)
                                                                               ggCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTAc                       >  1:3312437/1‑99 (MQ=255)
                                                                                 cGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGaa                    >  2:2375414/1‑100 (MQ=255)
                                                                                  gTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAAt                   <  1:726997/100‑1 (MQ=255)
                                                                                   tttGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATg                  <  2:3326788/100‑1 (MQ=255)
                                                                                      gccaggcgacgatGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGgcg               <  2:1728084‑M2/87‑1 (MQ=255)
                                                                                      gATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGgcg               <  2:628538/100‑1 (MQ=255)
                                                                                      gATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGgcg               >  1:225653/1‑100 (MQ=255)
                                                                                      gATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGgcg               <  2:3516591/100‑1 (MQ=255)
                                                                                       aTGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCGACTTCGCTTATTGAACGCCGTGTACGAATGgcgc              >  1:1447027/1‑100 (MQ=255)
                                                                                        tGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATgg                 >  1:3574175/1‑96 (MQ=255)
                                                                                        tGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCt             >  1:267224/1‑100 (MQ=255)
                                                                                        tGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCt             >  2:112719/1‑100 (MQ=255)
                                                                                        tGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCt             >  2:1047974/1‑100 (MQ=255)
                                                                                          ggCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTg           <  2:1486874/100‑1 (MQ=255)
                                                                                          ggCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTg           <  2:502317/100‑1 (MQ=255)
                                                                                          ggCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTg           <  1:3502354/100‑1 (MQ=255)
                                                                                           gCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTgg          <  2:1619469/100‑1 (MQ=255)
                                                                                           gCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTgg          >  2:2426551/1‑100 (MQ=255)
                                                                                            cAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGc         <  2:2638003/100‑1 (MQ=255)
                                                                                            cAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGc         >  1:11960/1‑100 (MQ=255)
                                                                                             aaCGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCa        >  2:459841/1‑100 (MQ=255)
                                                                                             aaCGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCa        >  1:142255/1‑100 (MQ=255)
                                                                                              acgatGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCAc       <  1:3501402‑M2/95‑1 (MQ=255)
                                                                                                   |                                                                                                   
CGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCG  >  NC_000913/4631513‑4631711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.