New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 731060 =NA (NA)3 (0.020) 3/166 NT NA coding (1478/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 731092 = NA (NA)coding (1510/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

ACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCAC  >  NC_000913/730994‑731156
                                                                                                  |                                                                
acaGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCCGGAACTACGCCGGGAATATGATGACTGGCGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGa                                                                 >  1:3523544/1‑100 (MQ=14)
 caGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGat                                                                >  2:225025/1‑100 (MQ=255)
 caGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGat                                                                <  1:310397/100‑1 (MQ=255)
 caGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGat                                                                >  2:2369219/1‑100 (MQ=255)
  aGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGata                                                               <  1:1400757/100‑1 (MQ=255)
  aGCAAGTTGACGTCAGCCACCGGGCCTGTCGTGCTGGAAATACGCCGGGTATATGAGGAGAGGGGCCGTCTGATTCAGGAAACTGCCCCTGGCGGCGcta                                                               >  1:192554/1‑100 (MQ=14)
   gCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGata                                                               >  2:2677847/1‑99 (MQ=40)
    ccAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATc                                                             >  1:1862079/1‑100 (MQ=40)
      aGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAc                                                           <  2:3605517/100‑1 (MQ=255)
      aGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAc                                                           <  2:3605114/100‑1 (MQ=255)
       gTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAcc                                                          >  2:237047/1‑100 (MQ=255)
        ttAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAccc                                                         <  1:71748/100‑1 (MQ=255)
           aCGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCg                                                        >  1:938170/1‑98 (MQ=40)
           aCGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCt                                                      >  1:3478113/1‑100 (MQ=255)
            cGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTa                                                     >  1:3652288/1‑100 (MQ=255)
             gTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTAc                                                    >  2:160640/1‑100 (MQ=255)
               cAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTAcc                                                   >  2:239154/1‑99 (MQ=255)
               cAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAACATGATGAATGGGGCCGTCTCATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCg                                                  <  1:2033427/100‑1 (MQ=255)
                aGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGt                                                 <  2:3700443/100‑1 (MQ=40)
                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGCATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                                >  1:1825882/1‑100 (MQ=255)
                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                                >  2:865498/1‑100 (MQ=255)
                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                                >  2:2676255/1‑100 (MQ=255)
                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                                >  2:3243556/1‑100 (MQ=255)
                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGACCCCCCCGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                                >  2:1054149/1‑100 (MQ=14)
                  ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa                                               <  2:3192177/100‑1 (MQ=40)
                  ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa                                               >  1:332937/1‑100 (MQ=255)
                   cACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTAt                                              <  2:2225521/100‑1 (MQ=40)
                   cACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTAt                                              <  2:742262/100‑1 (MQ=40)
                   cACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTAt                                              <  1:3645700/100‑1 (MQ=255)
                    aCCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATg                                             >  1:672280/1‑100 (MQ=255)
                    aCCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATg                                             <  1:2366438/100‑1 (MQ=255)
                    aCCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATg                                             <  1:431119/100‑1 (MQ=255)
                     ccGGGCCTGACGGGCTGGAAATTCGCCTGGAATATTATGAATGGGGCCGTCTGATTCAGGAAACGGCCCCTGCCGGCTATATCACCCGCTACCGTTAt                                              <  1:2829414/98‑1 (MQ=11)
                         gCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAAt                                        <  2:1437578/100‑1 (MQ=255)
                          ccTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATc                                       <  1:1569653/100‑1 (MQ=255)
                           cTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATcc                                      <  1:536631/100‑1 (MQ=255)
                           cTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATcc                                      <  2:827352/100‑1 (MQ=255)
                            tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCca                                     >  1:3614372/1‑100 (MQ=255)
                            tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCca                                     >  1:407475/1‑100 (MQ=255)
                            tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCca                                     >  1:51350/1‑100 (MQ=255)
                            tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCca                                     <  2:573676/100‑1 (MQ=255)
                             gACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcac                                    >  1:2837962/1‑100 (MQ=255)
                             gACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcac                                    >  1:1138916/1‑100 (MQ=255)
                               cGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGTCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcacac                                  >  2:386314/1‑100 (MQ=255)
                               cGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcacac                                  >  2:1271096/1‑100 (MQ=255)
                               cGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcacac                                  <  2:1694063/100‑1 (MQ=40)
                               cGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcacac                                  <  2:1520303/100‑1 (MQ=255)
                               cGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcacac                                  <  1:2617920/100‑1 (MQ=40)
                               cGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcaca                                   <  1:1075212/99‑1 (MQ=40)
                                 ggCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                 >  1:3164465/1‑99 (MQ=255)
                                 ggCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAg                                >  1:3282870/1‑100 (MQ=255)
                                 ggCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAg                                >  1:645256/1‑100 (MQ=255)
                                  gCTGGAAATCCGCCGGGAATATGAGGAATAGGGCCGTCTGATGCAGGAAACGGCCCGTGACTGCGGTATCACCCGCTACCGTTACGAGAATCCACACAGt                               >  1:2175791/1‑100 (MQ=11)
                                  gCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGt                               >  2:2207468/1‑100 (MQ=255)
                                  gCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGt                               <  2:3566890/100‑1 (MQ=40)
                                   cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                              >  2:417041/1‑100 (MQ=255)
                                   cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                              <  1:503135/100‑1 (MQ=40)
                                    tGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGa                             >  2:3371769/1‑100 (MQ=255)
                                    tGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGa                             <  1:3371745/100‑1 (MQ=255)
                                     ggAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGAc                            >  2:3711800/1‑100 (MQ=40)
                                     ggAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGAc                            >  2:1725174/1‑100 (MQ=255)
                                     ggAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGAc                            <  2:161855/100‑1 (MQ=40)
                                     ggAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGAc                            >  1:650917/1‑100 (MQ=255)
                                     ggAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATCCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGAc                            <  1:3165853/100‑1 (MQ=255)
                                      gAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACt                           <  2:2749077/100‑1 (MQ=40)
                                       atttgggCCGGGAAGATGATGAATGGGGCCGTCTGATTCAGGAACCTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACt                           <  1:924589/93‑1 (MQ=11)
                                        aaTACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTa                         <  2:3038820/100‑1 (MQ=38)
                                         aTACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAc                        <  1:1933208/100‑1 (MQ=38)
                                         aTACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAc                        <  2:3280927/100‑1 (MQ=38)
                                         aTACGCCGGGAATATGATGAATGGGGCCGTATGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTa                         >  1:1890548/1‑99 (MQ=25)
                                          tACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAcc                       >  1:3585491/1‑100 (MQ=35)
                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCt                     >  1:1104520/1‑100 (MQ=32)
                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCt                     >  2:2113019/1‑100 (MQ=33)
                                              ccGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTgc                   >  2:1820773/1‑100 (MQ=33)
                                                gggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTgcgc                 <  1:3223925/100‑1 (MQ=33)
                                                 ggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCa                <  1:2460528/100‑1 (MQ=32)
                                                    atatGATGTATGGGGCCGTCTGATTCAGGAAACTTCCCCTGTCGGCGATATCACCCGCTACCGTTATGATTATCCTCTCATTGACTTACCCTGCGCAACg             <  1:1077812/100‑1 (MQ=11)
                                                    atatGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACg             >  1:3447677/1‑100 (MQ=32)
                                                    atatGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACg             <  2:758069/100‑1 (MQ=33)
                                                     cgatctgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACgg            <  2:2041186/95‑1 (MQ=18)
                                                      atgatgAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGa           >  2:245869/1‑100 (MQ=33)
                                                       tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa          >  2:480859/1‑100 (MQ=33)
                                                        gatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTCTGATAATCCACACAGTGACTTACCCTGCGCAACGGAAg         >  2:2325239/1‑100 (MQ=17)
                                                         atgaATGGGGCCGTCTGATTCAGGAACCTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCCCACCCTGACTTACCCAGCGCAACGGaa          >  1:3245739/1‑98 (MQ=11)
                                                         atgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGa        <  2:3447701/100‑1 (MQ=32)
                                                         atgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGa        <  2:2758577/100‑1 (MQ=33)
                                                         atgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGa        <  1:1254444/100‑1 (MQ=33)
                                                           gaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGAGATCACCCGCTACCGTTATGCTAATCCACACAGTGACTTACCCTGCGCAACGGagatcg      >  1:2041176/1‑95 (MQ=11)
                                                            aaTGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGc     >  2:1599753/1‑100 (MQ=32)
                                                            aaTGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGc     >  2:611840/1‑100 (MQ=32)
                                                             aTGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATAACACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGcc    >  1:2036476/1‑100 (MQ=17)
                                                               ggggCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCAc  <  2:1879376/100‑1 (MQ=11)
                                                                                                  |                                                                
ACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCAC  >  NC_000913/730994‑731156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.