BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1410933 =	NA (NA)	4 (0.030)	4/164	NT	NA	noncoding (1/37 nt)	REP115 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP115 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	1410966 =	NA (NA)	4 (0.030)	4/164	NT	NA	noncoding (34/37 nt)	REP115 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP115 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 126 total aligned reads displayed.

GTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTT  >  NC_000913/1410867‑1411065

gTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGcc                                                                                                     <  2:2155882/100‑1 (MQ=255)

  gCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTc                                                                                                   <  2:60577/100‑1 (MQ=255)

   ggttgaagtgaaataaccaggatagcgcccgatgcgcaagcgtatcgggctactcttatggagGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTcc                                                                                                  >  1:45650‑M1/64‑100 (MQ=255)

   cGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTcc                                                                                                  <  1:3706084/100‑1 (MQ=255)

   cGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATATTATTAGGGATTGCCGGATGCGACGCTGGGCGCGTCTTATCCGGCCTcc                                                                                                  >  1:622623/1‑100 (MQ=255)

    ggTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCa                                                                                                 <  2:1788871/100‑1 (MQ=255)

      ttattaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATa                                                                                               <  2:1820657/100‑1 (MQ=255)

      ttattaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATa                                                                                               <  2:491952/100‑1 (MQ=255)

        attaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAag                                                                                             <  2:2567327/100‑1 (MQ=255)

         ttaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAaga                                                                                            >  1:141479/1‑100 (MQ=255)

         ttaAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAaga                                                                                            >  2:1330100/1‑100 (MQ=255)

          taAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAagag                                                                                           >  1:1789733/1‑100 (MQ=255)

          taAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAagag                                                                                           <  2:2340893/100‑1 (MQ=255)

          taAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAagag                                                                                           <  1:3638648/100‑1 (MQ=255)

           aaaaTAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGt                                                                                          >  2:1635947/1‑100 (MQ=255)

           aaaaTAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGt                                                                                          >  2:1910258/1‑100 (MQ=255)

              ataatGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGc                                                                                       <  2:3478185/100‑1 (MQ=255)

                 atGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCg                                                                                    >  1:1037447/1‑100 (MQ=255)

                  tGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGTATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGa                                                                                   >  1:2813278/1‑100 (MQ=255)

                  gatcttGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGa                                                                                   <  1:3153247/95‑1 (MQ=255)

                    aaaTGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGTGTCTTATCCGGCCTCCATAAGAGTAGCCCGATa                                                                                 >  2:2863379/1‑100 (MQ=255)

                    aaaTGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATa                                                                                 <  1:2655842/100‑1 (MQ=255)

                    aaaTGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATa                                                                                 <  2:1235000/100‑1 (MQ=255)

                     aaTGTTGGATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATAc                                                                                <  1:3162998/100‑1 (MQ=255)

                       tGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGaagatc                                                                              >  2:3153269/1‑95 (MQ=255)

                        gTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCt                                                                             >  2:639167/1‑100 (MQ=255)

                        gTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCt                                                                             >  1:2412958/1‑100 (MQ=255)

                        gTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCt                                                                             >  1:2310325/1‑100 (MQ=255)

                         ttGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCtt                                                                            >  1:1903749/1‑100 (MQ=255)

                         ttGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCtt                                                                            >  1:1699035/1‑100 (MQ=255)

                          tGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGTCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTg                                                                           >  2:524041/1‑100 (MQ=255)

                            aaTTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgcg                                                                         <  2:2335870/100‑1 (MQ=255)

                            aaTTGCCGGGTGCAAGAGTAAACATCTTATTCAGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgcg                                                                         <  1:2627005/100‑1 (MQ=255)

                            aaTTGCCGGGTGAAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTgcg                                                                         <  2:3711943/100‑1 (MQ=255)

                                 ccGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCg                                                                    <  2:3186641/100‑1 (MQ=255)

                                 ccGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCg                                                                    <  2:558157/100‑1 (MQ=255)

                                  cGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCgg                                                                   <  2:1466968/100‑1 (MQ=37)

                                   gggTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCggg                                                                  <  1:3498149/100‑1 (MQ=38)

                                   gggTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCggg                                                                  <  2:3120168/100‑1 (MQ=37)

                                   gggTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCggg                                                                  <  2:1341893/100‑1 (MQ=37)

                                   gggTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCggg                                                                  <  1:745939/100‑1 (MQ=38)

                                    ggTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATGCGCAAGCGTATCGGgc                                                                 <  2:686469/100‑1 (MQ=37)

                                    cgTGCAAGAGTATGCATCTTATTCGGGGTTGCCGTAGTCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGTGCTATACGCTTGCGCATCg                                                                    <  1:2923367/96‑1 (MQ=37)

                                     gTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGgcg                                                                <  2:1685558/100‑1 (MQ=255)

                                      tGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGgcgc                                                               >  2:1001822/1‑100 (MQ=255)

                                      tGCAAGAGTAAACATCTTATTCAGGATTGGCGGATGCGATGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCTGATGCGCAAGCGTATCgg                                                                   <  1:386680/96‑1 (MQ=37)

                                        cAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa                                                             >  2:1990434/1‑100 (MQ=255)

                                        cAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa                                                             >  2:1872309/1‑100 (MQ=255)

                                        cAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa                                                             >  2:2336477/1‑100 (MQ=255)

                                        cAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTa                                                             >  1:752526/1‑100 (MQ=255)

                                         aaGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTAt                                                            >  1:1868305/1‑100 (MQ=255)

                                            agTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCt                                                         >  2:1415398/1‑100 (MQ=255)

                                             gTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTg                                                        <  2:2043822/100‑1 (MQ=255)

                                              tAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg                                                       >  2:2822938/1‑100 (MQ=255)

                                              tAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCCCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg                                                       <  2:2806972/100‑1 (MQ=255)

                                               aaaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTgg                                                       >  1:1660544/1‑99 (MQ=255)

                                               aaaCATCGTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAACAGTAGCTCGATACGCTTGCGCATCGGGCGCTATCCTGGt                                                      <  1:770298/100‑1 (MQ=255)

                                                aaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGtt                                                     <  1:1651974/100‑1 (MQ=255)

                                                aaCATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGtt                                                     >  1:239292/1‑100 (MQ=255)

                                                   aTCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAtt                                                  >  2:3396092/1‑100 (MQ=255)

                                                     cTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTAtttn                                                <  2:341364/100‑2 (MQ=255)

                                                     cTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTc                                                <  1:1525943/100‑1 (MQ=255)

                                                     cTTATTCGGGATAGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTc                                                >  2:2458023/1‑100 (MQ=255)

                                                      ttATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCa                                               <  1:38702/100‑1 (MQ=255)

                                                       tATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCAc                                              <  2:831308/100‑1 (MQ=255)

                                                        aTTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACt                                             >  1:97886/1‑100 (MQ=255)

                                                          tCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTc                                           >  1:1078375/1‑100 (MQ=255)

                                                             ggATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAc                                        >  2:1764384/1‑100 (MQ=255)

                                                             ggATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAc                                        <  2:1037452/100‑1 (MQ=255)

                                                              gATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAAcc                                       <  1:3506263/100‑1 (MQ=255)

                                                                 tGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACcaca                                    >  1:3591763/1‑100 (MQ=255)

                                                                 ccgatctTGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACcaca                                    >  1:2147918‑M1/8‑100 (MQ=255)

                                                                  GCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAt                                   >  1:2336464‑M1/1‑100 (MQ=255)

                                                                   ccggataagacgcggccagcgtcgcatccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAtt                                  >  1:2049971‑M2/33‑100 (MQ=255)

                                                                   CCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACAtt                                  <  2:556497‑M1/100‑1 (MQ=255)

                                                                    CGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTc                                 >  2:1903759‑M1/1‑100 (MQ=255)

                                                                     tgataagacgcggccagcgtcgcatccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCa                                <  1:658816‑M2/70‑1 (MQ=255)

                                                                     GGATGCGACGCTGGCCGCGTCTTATCCGGCCGCCATAAGAGGAGCCCGATACGCTTCCGCACCGGGCGCTCTCCTGGTTATTTCACTGCAACCACATTc                                 <  1:2529707‑M1/99‑1 (MQ=255)

                                                                      gataagacgcggccagcgtcgcatccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTcaa                               >  2:658819‑M2/30‑99 (MQ=255)

                                                                       ATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc                              >  1:2987912‑M1/1‑100 (MQ=255)

                                                                       ATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGc                              >  2:1300462‑M1/1‑100 (MQ=255)

                                                                        TGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGcc                             <  2:3061271‑M1/100‑1 (MQ=255)

                                                                          cGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGt                           >  1:979225/1‑100 (MQ=255)

                                                                          cGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGGAGCCCGATACGCTTGCGCATCGGGCGCTATCGTGGTTATTTCACTTCAACCACATTCAGCCGt                           >  1:63120/1‑100 (MQ=255)

                                                                             cGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAAc                        >  2:2489066/1‑100 (MQ=255)

                                                                                  gCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATc                   <  1:2857130/100‑1 (MQ=255)

                                                                                  gCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATc                   >  1:1129539/1‑100 (MQ=255)

                                                                                  gCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATc                   >  1:2283276/1‑100 (MQ=255)

                                                                                  gCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTCGTTATTTCACTTCAACCACATTCAGCCGTAACTCATc                   <  1:3144699/100‑1 (MQ=255)

                                                                                   ccGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATcc                  <  1:321751/100‑1 (MQ=255)

                                                                                          ttATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGAt           <  1:2669512/100‑1 (MQ=255)

                                                                                             tccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGAtttt        >  2:3627646‑M2/7‑100 (MQ=255)

                                                                                              ccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGAtttt        <  1:2347974‑M2/94‑1 (MQ=255)

                                                                                              ccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTc       >  2:3729974‑M2/6‑100 (MQ=255)

                                                                                              ccggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTc       >  1:184250‑M2/6‑100 (MQ=255)

                                                                                                ggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAt     <  1:2214922‑M2/97‑1 (MQ=255)

                                                                                                ggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAt     >  1:213859‑M2/4‑100 (MQ=255)

                                                                                                ggcCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAt     >  1:1169333‑M2/4‑100 (MQ=255)

                                                                                                  cCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCt   >  1:648044‑M2/2‑100 (MQ=255)

                                                                                                   cTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCAtctt  <  2:2806100/100‑1 (MQ=255)

GTGCGGTTATTAAAATAATGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGGCCTCCATAAGAGTAGCCCGATACGCTTGCGCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTT  >  NC_000913/1410867‑1411065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.