Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 2,270,300 IS5 (+) +4 bp 100% coding (322‑325/567 nt) mepS → murein DD‑endopeptidase, space‑maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD‑carboxypeptidase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2270300 =2 (0.020)115 (0.880) 71/176 NT 98.2% coding (322/567 nt) mepS murein DD‑endopeptidase, space‑maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD‑carboxypeptidase
?NC_000913 = 3131340 NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 22703032 (0.020)103 (0.780) 68/178 NT 98.0% coding (325/567 nt) mepS murein DD‑endopeptidase, space‑maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD‑carboxypeptidase
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 110 total aligned reads displayed.

AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGAT  >  NC_000913/3131248‑3131439
                                                                                            |                                                                                                   
aaGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATc                                                                                              <  1:1005403/100‑1 (MQ=11)
aaGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATc                                                                                              >  2:2882917/1‑100 (MQ=11)
 aGGCATTTACGGTAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATc                                                                                              <  1:1650242/99‑1 (MQ=11)
  ggCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAg                                                                                            >  1:3569827/1‑100 (MQ=32)
   gCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAgg                                                                                           <  2:1251304/100‑1 (MQ=33)
   gCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAgg                                                                                           <  2:2128318/100‑1 (MQ=33)
        tACGGGAGAAAAAATCGGCTCAAACCTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTCTTCGCACCTTCCCTAAATCAGGTCATa                                                                                      >  1:1975069/1‑100 (MQ=255)
        tACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCAt                                                                                       >  2:58662/1‑99 (MQ=38)
          cGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACg                                                                                    >  1:2716771/1‑100 (MQ=255)
            ggAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCt                                                                                  >  2:2344911/1‑100 (MQ=255)
            ggAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCt                                                                                  <  1:597398/100‑1 (MQ=255)
            ggAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCt                                                                                  >  1:71199/1‑100 (MQ=255)
              agaAAAAATCGGCTCAAACATGAAGATATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCttn                                                                                <  1:2961999/100‑2 (MQ=255)
              agaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTc                                                                                <  1:163496/100‑1 (MQ=255)
              agaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTc                                                                                >  1:1580796/1‑100 (MQ=255)
              agaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTc                                                                                <  2:663120/100‑1 (MQ=255)
               gaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTGAGCCGAGAAGAATTTCCCCGCATATTCGCACCTTCCCTAAATCAGGTCATACGCTTCg                                                                               >  1:2928932/1‑100 (MQ=255)
               gaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCg                                                                               >  2:3141724/1‑100 (MQ=255)
               gaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCg                                                                               >  1:486069/1‑100 (MQ=255)
               gaAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCg                                                                               >  1:213231/1‑100 (MQ=255)
                aaaaaaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCga                                                                              >  2:2732908/1‑100 (MQ=255)
                aaaaaaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCga                                                                              >  2:3360755/1‑100 (MQ=255)
                 aaaaaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCgag                                                                             <  2:816196/100‑1 (MQ=255)
                 aaaaaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCgag                                                                             >  2:3412141/1‑100 (MQ=255)
                 aaaaaTCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCgag                                                                             >  2:623963/1‑100 (MQ=255)
                       cGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACtt                                                                       <  1:2156107/100‑1 (MQ=255)
                       cGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCACACCTTCCCTAAATCAGGTCATACGCTTCGAGATACtt                                                                       >  1:2028254/1‑100 (MQ=255)
                          cTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAAc                                                                    <  1:231263/100‑1 (MQ=255)
                          cTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAAc                                                                    <  1:2858878/100‑1 (MQ=255)
                          cTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAAc                                                                    >  2:594438/1‑100 (MQ=255)
                           tCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACg                                                                   <  1:3055210/100‑1 (MQ=255)
                            cAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGc                                                                  >  1:3389857/1‑100 (MQ=255)
                             aaaCATAAAGAAATGAAATGACTGAGTCAGACGAGAAGAAATTCCCCGCTTATTCGCACCTTCCCTAAATAAAGTCATACGCTTCGAGATACTTAACg                                                                   <  1:2032331/98‑1 (MQ=17)
                              aaCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCa                                                                >  2:1183327/1‑100 (MQ=255)
                               aCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCaa                                                               <  1:2339126/100‑1 (MQ=255)
                                 aTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAac                                                             <  2:3257065/100‑1 (MQ=255)
                                 aTGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAac                                                             <  2:3575498/100‑1 (MQ=255)
                                   gaagaaATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAacac                                                           >  2:1747105/1‑100 (MQ=255)
                                    aagaaATGAAATGTTTGAGTCAGTCGAGAAGAATTTCACCGCTTATTCGCACCTTCCCAAAATAAGGTCATAGGCTTCGAGCTCCTTAACGCCATacac                                                           >  1:3571020/1‑99 (MQ=17)
                                      gaaatgaaatGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAAGACATACGCTTCGAGATACTTAACGCCAAaca                                                            >  1:748303/1‑96 (MQ=255)
                                       aaatgaaatgACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGc                                                       <  2:154357/100‑1 (MQ=255)
                                        aatgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCg                                                      <  2:2716790/100‑1 (MQ=255)
                                        aatgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCg                                                      <  1:1292161/100‑1 (MQ=255)
                                          tgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGaa                                                    >  1:1407490/1‑100 (MQ=255)
                                          tgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGaa                                                    <  2:1401867/100‑1 (MQ=255)
                                           gaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCAAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGaaa                                                   <  1:527968/100‑1 (MQ=255)
                                            tcttgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAAt                                                  <  1:1671504/97‑1 (MQ=255)
                                             aatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATg                                                 >  2:2019220/1‑100 (MQ=255)
                                             aatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATg                                                 >  2:2435891/1‑100 (MQ=255)
                                               tgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGa                                                <  2:2746490/99‑1 (MQ=255)
                                               tgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAg                                               >  1:529882/1‑100 (MQ=255)
                                                gaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGc                                              >  2:2868307/1‑100 (MQ=255)
                                                 aCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCg                                             <  2:1587185/100‑1 (MQ=255)
                                                 aCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCg                                             <  2:2028264/100‑1 (MQ=255)
                                                        cAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGcc                                      >  1:570426/1‑100 (MQ=255)
                                                        cAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGcc                                      <  2:3441267/100‑1 (MQ=255)
                                                        cAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGcc                                      <  1:1383379/100‑1 (MQ=255)
                                                            cGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCcgacg                                  >  2:3431733/1‑100 (MQ=255)
                                                              agaagaATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATAGGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGCGCGGCTTGCCGACGAt                                >  1:2074463/1‑100 (MQ=255)
                                                              agaagaATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGAt                                <  2:888452/100‑1 (MQ=255)
                                                              agaagaATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGAt                                <  1:3239755/100‑1 (MQ=255)
                                                              agaagaATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGAt                                <  1:2435877/100‑1 (MQ=255)
                                                               gaagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAGATGAGCGGCTTGCCAACGATc                               <  1:2510025/100‑1 (MQ=255)
                                                               gaagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGAt                                >  1:437174/1‑99 (MQ=255)
                                                               gaagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATc                               >  2:2299500/1‑100 (MQ=255)
                                                               gaagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATc                               <  1:814141/100‑1 (MQ=255)
                                                                aagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCa                              <  1:3288524/100‑1 (MQ=255)
                                                                aagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCa                              <  1:1457935/100‑1 (MQ=255)
                                                                aagaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCa                              <  1:3131093/100‑1 (MQ=255)
                                                                  gaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAac                            >  2:718130/1‑100 (MQ=255)
                                                                  gaaTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAac                            <  1:3141702/100‑1 (MQ=255)
                                                                    aTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAacac                          >  2:945382/1‑100 (MQ=255)
                                                                    aTTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAacac                          >  1:759106/1‑100 (MQ=255)
                                                                      ttCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATTAGCGGCTTGCCGGCGATCAACACcg                        <  1:2351611/100‑1 (MQ=255)
                                                                       tCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACcgc                       <  2:1907619/100‑1 (MQ=255)
                                                                        ccccGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACcgcg                      <  1:3607067/100‑1 (MQ=255)
                                                                         cccGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGa                     >  2:2294759/1‑100 (MQ=255)
                                                                         cccGCTTATGCGCACTTTCCCTAAATCAGGTCATACGCTTCGATATTCTTATCGCCAAACACCTGCGAAATGATCGGCTTGCCGACGATCATCACcgcg                      <  2:1278658/99‑1 (MQ=255)
                                                                           cGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAgc                   <  2:2928951/100‑1 (MQ=255)
                                                                            gCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAgcg                  <  1:683835/100‑1 (MQ=255)
                                                                            gCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAgcg                  <  2:2506552/100‑1 (MQ=255)
                                                                            gCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAgcg                  <  2:1455834/100‑1 (MQ=255)
                                                                             cTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAgcgc                 >  2:1657062/1‑100 (MQ=255)
                                                                               tATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGcca               <  1:2732889/100‑1 (MQ=255)
                                                                                aTTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGccac              <  1:1183321/100‑1 (MQ=255)
                                                                                 ttCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGccacc             <  2:2833219/100‑1 (MQ=255)
                                                                                 ttCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGccacc             >  2:2794717/1‑100 (MQ=255)
                                                                                 ttCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGccacc             <  2:626073/100‑1 (MQ=255)
                                                                                   cGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAg           >  2:3590624/1‑100 (MQ=255)
                                                                                     cACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGaa         >  2:2074682/1‑100 (MQ=255)
                                                                                      aCCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAAt        <  2:2260924/100‑1 (MQ=255)
                                                                                      aCCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAAt        <  1:3286290/100‑1 (MQ=255)
                                                                                         ttCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCATTCTCTTGCGATGATACCGCGTCCCCCGAGATCTACACCGCGAGCGCCACCAGAATAcc     <  1:2639013/100‑1 (MQ=255)
                                                                                         ttCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATAcc     <  1:2344898/100‑1 (MQ=255)
                                                                                          tCCCTAAATCAGGTCATACGCTTCGAGATACTTGACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCg    <  1:266276/100‑1 (MQ=255)
                                                                                          tCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCg    <  1:2914431/100‑1 (MQ=255)
                                                                                          tCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCg    <  2:3109971/100‑1 (MQ=255)
                                                                                            ccTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGAt  >  2:685228/1‑100 (MQ=255)
                                                                                            ccTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGAt  >  2:540309/1‑100 (MQ=255)
                                                                                            ccTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGAt  >  2:1408042/1‑100 (MQ=255)
                                                                                            |                                                                                                   
AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGAT  >  NC_000913/3131248‑3131439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.