New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16653NA (NA)14 (0.120) 6/164 NT NA noncoding (1267/1345 nt) IS186 repeat region
?NC_000913 = 16691 NA (NA)noncoding (1305/1345 nt) IS186 repeat region

TACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTC  >  NC_000913/16634‑16790
                                                         |                                                                                                   
tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATc                                                           <  2:2924546/100‑1 (MQ=11)
tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATc                                                           >  2:1737925/1‑100 (MQ=11)
tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATc                                                           <  2:2769410/100‑1 (MQ=11)
tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTCCAGATGGTTCAACCCTTAAGTTAGCGCTGATGGGATc                                                           >  2:1280197/1‑100 (MQ=2)
 aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCa                                                          <  2:1252272/100‑1 (MQ=31)
  cAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCAc                                                         <  1:2854091/100‑1 (MQ=32)
     aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTcc                                                      <  1:846613/100‑1 (MQ=35)
       cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTcccc                                                    >  1:1532620/1‑100 (MQ=38)
       cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTcccc                                                    <  1:77054/100‑1 (MQ=38)
       cGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTcccc                                                    <  1:3526006/100‑1 (MQ=38)
        gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccg                                                   >  2:2891040/1‑100 (MQ=38)
         cAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgc                                                  >  1:3252828/1‑100 (MQ=40)
         cAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgc                                                  >  1:1618044/1‑100 (MQ=38)
         cAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgc                                                  >  2:55292/1‑100 (MQ=38)
          aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgcc                                                 >  1:764886/1‑100 (MQ=40)
           aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgccg                                                >  2:1921798/1‑100 (MQ=255)
           aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgccg                                                >  2:1915426/1‑100 (MQ=255)
           aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCccgccg                                                >  1:2650259/1‑100 (MQ=255)
            ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGt                                               >  1:257379/1‑100 (MQ=255)
            ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGt                                               >  1:906729/1‑100 (MQ=255)
            ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGt                                               >  2:1237678/1‑100 (MQ=255)
              gaagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTg                                             >  1:984557/1‑100 (MQ=255)
               aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGc                                            >  1:3605262/1‑100 (MQ=255)
                agaaCGCGAGGCCCCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACTCTTAAGTTAGCGCTTATGGGCTCACTCCCCGCCGTTg                                             >  1:1000089/1‑98 (MQ=14)
                agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGct                                           >  2:3511455/1‑100 (MQ=255)
                agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGct                                           >  2:507693/1‑100 (MQ=255)
                agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGct                                           >  2:899873/1‑100 (MQ=255)
                  caCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTGGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGctc                                          <  1:964754/98‑1 (MQ=255)
                   aCGCGATGCAGCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCtt                                        <  2:2556250/100‑1 (MQ=255)
                   aCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCtt                                        >  2:3272335/1‑100 (MQ=255)
                   aCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCtt                                        >  2:536608/1‑100 (MQ=255)
                    cgcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTa                                       >  2:2305428/1‑100 (MQ=255)
                     gcgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGCTGGTTCAACCCTTAAGTTCGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTAc                                      >  1:2403647/1‑100 (MQ=255)
                      cgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACt                                     <  1:1312945/100‑1 (MQ=255)
                       gAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTc                                    <  2:2587808/100‑1 (MQ=255)
                        aGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCg                                   <  1:3023205/100‑1 (MQ=255)
                         ggCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCgg                                  <  1:1556524/100‑1 (MQ=255)
                         ggCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCgg                                  >  2:432573/1‑100 (MQ=255)
                         ggCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCg                                   <  1:2014963/99‑1 (MQ=255)
                          gCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGa                                 >  1:2165384/1‑100 (MQ=255)
                            aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGAtt                               <  1:3277137/100‑1 (MQ=255)
                            aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGAtt                               >  2:3146925/1‑100 (MQ=255)
                            aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGAtt                               <  1:2381009/100‑1 (MQ=255)
                            aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGAtt                               >  2:2072552/1‑100 (MQ=255)
                            aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGAt                                >  1:429851/1‑99 (MQ=255)
                             tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGTTCACTCCCCGCCGTTGCTCTTACTCGGATTc                              <  2:987958/100‑1 (MQ=255)
                             tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTc                              <  2:2690387/100‑1 (MQ=255)
                               gTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGt                            >  1:3181983/1‑100 (MQ=255)
                               gTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGt                            <  2:3705720/100‑1 (MQ=255)
                               gTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGt                            >  1:2228301/1‑100 (MQ=255)
                                tCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTa                           >  2:800313/1‑100 (MQ=255)
                                tCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTa                           >  1:3153376/1‑100 (MQ=255)
                                 cTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTaa                          >  2:429321/1‑100 (MQ=255)
                                 cTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTaa                          >  2:1517701/1‑100 (MQ=255)
                                  ttAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAg                         <  2:622974/100‑1 (MQ=255)
                                  ttAACGAAGCAACGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAg                         >  1:1956034/1‑100 (MQ=255)
                                   tAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGc                        >  2:3011188/1‑100 (MQ=255)
                                   tAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTCATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGc                        >  1:2390899/1‑100 (MQ=255)
                                    aaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGcc                       <  2:2752337/100‑1 (MQ=255)
                                     aCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCg                      >  1:3098400/1‑100 (MQ=255)
                                     aCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCATTGCTCTTACTCGGATTCGTAAGCCg                      <  1:1413222/100‑1 (MQ=255)
                                      cGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACGCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGt                     >  2:938534/1‑100 (MQ=255)
                                        aGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGa                   <  1:2812319/100‑1 (MQ=255)
                                         ggCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGaa                  >  1:2711614/1‑100 (MQ=255)
                                         ggCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGaa                  >  2:1148598/1‑100 (MQ=255)
                                         ggCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAACTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGaa                  <  1:394265/100‑1 (MQ=255)
                                           cACCGGGGTGTCGCATTCGTCAGATGGTTCAACCCTTACGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTg                    <  1:3373565/96‑1 (MQ=25)
                                           cACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGaaaa                >  1:1569578/1‑100 (MQ=255)
                                           cACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGaaaa                >  1:2258738/1‑100 (MQ=255)
                                           cACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGaaaa                >  2:308805/1‑100 (MQ=255)
                                            aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAAc               <  2:1895441/100‑1 (MQ=255)
                                             ccGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCGGCCGTTGCTCTTACTCGGATTCGTTAGCCGTGAAAACa              <  1:2305416/100‑1 (MQ=255)
                                              cGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATTGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAg             <  1:897262/100‑1 (MQ=255)
                                              cGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAg             <  2:928754/100‑1 (MQ=255)
                                               gAGGCGTCGCATTCTGCAGCTTGTTCAACCCTTAACTTACAGCCTATACCATCACTCCCCGCCCTTGCACTTACTCGGATTCGTAAGCCGTGAAAACAGc            <  1:2382372/100‑1 (MQ=255)
                                                 ggCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCaa          <  2:2362728/100‑1 (MQ=255)
                                                  gcggcgGATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCaa          <  1:3138049/99‑1 (MQ=255)
                                                  gCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAAc         <  1:2741169/100‑1 (MQ=255)
                                                  gCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAAc         <  1:2675361/100‑1 (MQ=255)
                                                   cGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAAcc        <  2:2597655/100‑1 (MQ=255)
                                                    gTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCt       >  1:3107824/1‑100 (MQ=255)
                                                    gTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCt       >  2:2034027/1‑100 (MQ=255)
                                                      ctcATTCTTCAGATGGGTCAACCCTTATGTTAGCGTTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGTCGTGAAAACAGCAAcc        <  1:2803824/95‑1 (MQ=37)
                                                      cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTcc     >  2:3707807/1‑100 (MQ=255)
                                                      cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTcc     <  2:1963528/100‑1 (MQ=255)
                                                      cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTcc     >  1:3139286/1‑100 (MQ=255)
                                                      cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTcc     >  1:3238096/1‑100 (MQ=255)
                                                       gCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCg    <  1:264610/100‑1 (MQ=255)
                                                        cATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGt   >  1:653131/1‑100 (MQ=255)
                                                         aTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCATTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTc  >  1:534408/1‑100 (MQ=255)
                                                         |                                                                                                   
TACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCACTCCCCGCCGTTGCTCTTACTCGGATTCGTAAGCCGTGAAAACAGCAACCTCCGTC  >  NC_000913/16634‑16790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.