New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2888334 =NA (NA)6 (0.050) 5/164 NT NA noncoding (1/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2888367 = NA (NA)noncoding (34/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 155 total aligned reads displayed.

TACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAC  >  NC_000913/2888268‑2888466
                                                                                                   |                                                                                                   
tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     >  1:1686223/1‑100 (MQ=255)
 gccgaaggtaGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                                                    >  1:654375/10‑100 (MQ=255)
 atcattcgcccgctgctccatccggcgcgtgatttgtgggaccacccatccgcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     >  1:3169555‑M1/66‑99 (MQ=255)
 aCCTTCGGCAGTTCGCTCAGGGCGTTTAGATCGAGTGTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGGTCTTATCAGGCCt                                                                                                    <  2:659725/100‑1 (MQ=255)
  tcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                                                   >  2:2168243‑M1/65‑100 (MQ=255)
  ccTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACGTAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                                                   >  1:2039577/1‑100 (MQ=255)
  ccTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                                                   >  1:297109/1‑100 (MQ=255)
    ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                                                 <  2:3531611/100‑1 (MQ=255)
    ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                                                 <  2:366584/100‑1 (MQ=255)
    ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                                                 <  1:1875852/100‑1 (MQ=255)
    ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                                                 >  2:1018269/1‑100 (MQ=255)
     tCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACaa                                                                                                <  1:3109442/100‑1 (MQ=255)
      ccgCAGTTCGTTCCGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTCTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACaa                                                                                                <  1:1757728/97‑1 (MQ=255)
      cGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAg                                                                                               <  2:1604694/100‑1 (MQ=255)
      cGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGAGTTCTTATCAGGCCTACAAg                                                                                               <  1:2289082/100‑1 (MQ=255)
       ggCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGa                                                                                              >  2:3362705/1‑100 (MQ=255)
           gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                                                          <  2:3325446/100‑1 (MQ=255)
           gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                                                          >  2:1666932/1‑100 (MQ=255)
            ttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAgcc                                                                                             >  1:3647308/1‑94 (MQ=255)
             tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                                                        <  2:2428702/100‑1 (MQ=255)
              cgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCt                                                                                       <  2:1840222/100‑1 (MQ=255)
                    gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 <  2:3100136/100‑1 (MQ=255)
                    gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 >  2:1260783/1‑100 (MQ=255)
                    gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 <  2:3391619/100‑1 (MQ=255)
                    gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 <  1:3345300/100‑1 (MQ=255)
                    gggCGTTTAGATCGAGTTTGGACACAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 <  2:3734342/100‑1 (MQ=255)
                     ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                                                                >  1:1701382/1‑100 (MQ=255)
                      gCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTa                                                                               <  1:982233/100‑1 (MQ=255)
                       cGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTaa                                                                              <  2:1816365/100‑1 (MQ=255)
                          ttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATcc                                                                           <  1:232388/100‑1 (MQ=255)
                            aGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCca                                                                         <  2:2376786/100‑1 (MQ=255)
                            aGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCca                                                                         >  2:2844868/1‑100 (MQ=255)
                             gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                                                        <  2:654378/100‑1 (MQ=255)
                             gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTGCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                                                        <  2:159773/100‑1 (MQ=255)
                              aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcacn                                                                       <  2:935466/100‑2 (MQ=255)
                              aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                                                       <  1:3505627/100‑1 (MQ=255)
                              aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                                                       >  1:2468645/1‑100 (MQ=255)
                              aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                                                       >  2:2483801/1‑100 (MQ=255)
                                  aGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATc                                                                   <  1:1018264/100‑1 (MQ=255)
                                    tttGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAc                                                                 <  2:2950706/100‑1 (MQ=255)
                                     ttGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcg                                                                >  2:3068589/1‑100 (MQ=255)
                                     tgggattaaccatcagcccggtcttgtaggcctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcg                                                                <  2:3220901‑M2/38‑1 (MQ=255)
                                       ggACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcgcg                                                              <  1:2199219/100‑1 (MQ=255)
                                         aCATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGcc                                                            <  2:1774846/100‑1 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           >  1:691329/1‑100 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           >  2:2831498/1‑100 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           >  2:725144/1‑100 (MQ=255)
                                           aTAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCgg                                                          >  2:1845542/1‑100 (MQ=255)
                                            tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                                                         >  1:304552/1‑100 (MQ=255)
                                            tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                                                         >  1:2415965/1‑100 (MQ=255)
                                                  ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                                                   <  2:899740/100‑1 (MQ=255)
                                                   cTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCa                                                  >  1:329358/1‑100 (MQ=255)
                                                    tCACTGTTTGCCTTGCCTGATGCGACGCTCATGCGTTGTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAc                                                 <  1:2515021/100‑1 (MQ=255)
                                                     cACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAcc                                                >  2:2765788/1‑100 (MQ=255)
                                                     cACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAcc                                                >  1:844275/1‑100 (MQ=255)
                                                              ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg                                       <  1:477837/100‑1 (MQ=255)
                                                               taggcctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga                                      >  2:2168243‑M2/37‑100 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGCGCACCGGGCGAatga                                      >  2:824513/1‑100 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGCatga                                      >  2:1057639/1‑100 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga                                      >  2:1614756/1‑100 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga                                      >  2:2314528/1‑100 (MQ=255)
                                                                 tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg                                    >  2:2761485/1‑100 (MQ=255)
                                                                  GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   >  1:1085299‑M1/1‑100 (MQ=255)
                                                                   cctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGcc                                  >  2:984181‑M2/33‑100 (MQ=255)
                                                                   CCTGATGCAACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGcc                                  >  2:3570419‑M1/1‑100 (MQ=255)
                                                                     TGATGCGACGCTCACGCGTTCTTATCAGGCCTCCAACACCTGGCTGCTGGTTAATCCCACCAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCg                                >  1:3510787‑M1/1‑100 (MQ=255)
                                                                      GATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGc                               >  1:401982‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTCACGCGTTCTTATCAGGCCTACAAGGCCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCAc                             >  1:3220879‑M1/1‑100 (MQ=255)
                                                                         gCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacg                            <  1:936601/100‑1 (MQ=255)
                                                                           gACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacgca                          >  2:1494721/1‑100 (MQ=255)
                                                                           gACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacgca                          >  2:2544860/1‑100 (MQ=255)
                                                                             cGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCAcc                        >  1:2323534/1‑100 (MQ=255)
                                                                              gttCACGCGTTCTTATCAGGCCTAAAAGACTGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCTGGCGAATGATGCCCGCACGCACCg                       <  1:2359023/98‑1 (MQ=255)
                                                                               cTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGt                      >  1:202115/1‑100 (MQ=255)
                                                                                 cACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTaa                    >  1:584581/1‑100 (MQ=255)
                                                                                 cACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTaa                    <  2:1234188/100‑1 (MQ=255)
                                                                                   cgcgTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAg                  >  1:717798/1‑100 (MQ=255)
                                                                                   cgcgTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAg                  >  1:1431273/1‑100 (MQ=255)
                                                                                   cgcgTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAg                  >  2:789711/1‑100 (MQ=255)
                                                                                    gcgTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGt                 <  2:3202454/100‑1 (MQ=255)
                                                                                     cgTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTc                <  2:524717/100‑1 (MQ=255)
                                                                                     cgTTCTTATCAGGCCTACAAGACCGGGCTGAGGGTTAATCCCACAACTCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTc                <  1:3436004/100‑1 (MQ=255)
                                                                                      gTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACCAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCg               >  2:2058590/1‑100 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGcc             <  1:2378615/100‑1 (MQ=255)
                                                                                         cTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTACAGTCGCCg            <  1:1244241/100‑1 (MQ=255)
                                                                                          ttATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGa           <  2:1151871/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGaa          >  1:856880/1‑100 (MQ=255)
                                                                                             tcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGc        >  2:247003‑M2/7‑100 (MQ=255)
                                                                                              caggcCTACAAGACCGGGCTGATGGTTAGTCCCACAAATCACGCGCTGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGcc       <  1:1809695‑M2/95‑1 (MQ=255)
                                                                                              caggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGcc       <  2:1917045‑M2/95‑1 (MQ=255)
                                                                                              caggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGcc       >  2:203340‑M2/6‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCTGGCGAATGATTTCCGCACGCACCGTAAAGTCGCCGAAGCCtt     >  1:1454457‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     >  2:323822‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     >  2:3225795‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGACGGGTAGTCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGcc       <  1:3180350‑M2/95‑1 (MQ=255)
                                                                                                  cCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCa   >  2:2300723‑M2/2‑100 (MQ=255)
                                                                                                  cCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCa   >  2:103911‑M2/2‑100 (MQ=255)
                                                                                                   cTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAc  <  2:842324/100‑1 (MQ=255)
                                                                                                   cTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAc  >  2:3093109/1‑100 (MQ=255)
                                                                                                   cTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAc  <  1:1158979/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAC  >  NC_000913/2888268‑2888466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.