New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3217434 =NA (NA)11 (0.090) 5/164 NT NA noncoding (1/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3217467 = NA (NA)noncoding (34/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 209 total aligned reads displayed.

ACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGT  >  NC_000913/3217368‑3217565
                                                                                                   |                                                                                                  
ggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtagcgggtgtagGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    >  1:3255675‑M1/67‑100 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGTATGAATCGCCGCATGCGCCAGTGGCGCGGTGCAATTGCTGGATGCGACGCTTGACGCGCCTTCTCCGGcc                                                                                                    <  2:746690/100‑1 (MQ=25)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGTGCCTTATCCGGcc                                                                                                    <  2:2511749/100‑1 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    <  1:1063007/100‑1 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    <  1:2940014/100‑1 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    <  1:2851746/100‑1 (MQ=255)
 ccGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCt                                                                                                   >  1:1166362/1‑100 (MQ=255)
  cgcgCCGCTGTTGATATTACGGAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGTCGCATGCGACGCTTGACGCGCCTTATCCGGCCt                                                                                                   <  1:2449872/99‑1 (MQ=25)
  cgcgCCGCTATTGATATTACGCAACTGGATTAATCGCCGGATCTGCGAGTGGTGCTGTGCAATTGCCGGATGCGGCGCTTGACGCGGGTTATCCGGCCtg                                                                                                  <  2:3715856/100‑2 (MQ=25)
   gcgcCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGGCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTac                                                                                                 <  1:2666561/100‑1 (MQ=255)
    cacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtggcgggtgtagGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTaca                                                                                                >  1:3254738‑M1/63‑100 (MQ=255)
      ccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAcc                                                                                              >  1:887427/1‑100 (MQ=255)
      ccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAcc                                                                                              >  1:2701884/1‑100 (MQ=255)
       cgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAccc                                                                                             >  2:2536635/1‑100 (MQ=255)
        gcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCg                                                                                            >  1:1651754/1‑100 (MQ=255)
         cTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGc                                                                                           <  1:1983177/100‑1 (MQ=255)
         cTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGc                                                                                           <  2:1078517/100‑1 (MQ=255)
         cTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTAACCGGCCTACACCCGc                                                                                           >  2:3674765/1‑100 (MQ=255)
          ttttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCt                                                                                          <  1:3356839/100‑1 (MQ=255)
          ttttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCt                                                                                          >  2:1474223/1‑100 (MQ=255)
           tttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTa                                                                                         >  2:521434/1‑100 (MQ=255)
            ttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTac                                                                                        <  1:422032/100‑1 (MQ=255)
             tGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTaca                                                                                       >  1:2815751/1‑100 (MQ=255)
              gATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacac                                                                                      <  2:3027895/100‑1 (MQ=255)
                tatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacacac                                                                                    >  2:3693642/1‑100 (MQ=255)
                     cGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGc                                                                               <  1:346929/100‑1 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                             >  1:445586/1‑100 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                             <  1:2060613/100‑1 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                             >  1:3398298/1‑100 (MQ=255)
                        aaCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAgg                                                                            <  1:839498/100‑1 (MQ=255)
                         aCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGc                                                                           <  2:380519/100‑1 (MQ=255)
                           tGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCt                                                                         <  2:2444238/100‑1 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                        >  2:3555435/1‑100 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                        >  2:2357729/1‑100 (MQ=255)
                              aTTAATCGCGGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGa                                                                       <  1:3038727/99‑1 (MQ=255)
                               ttAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATa                                                                     <  2:1401495/100‑1 (MQ=255)
                               ttAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATa                                                                     <  1:2772652/100‑1 (MQ=255)
                               ttAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATa                                                                     >  1:570518/1‑100 (MQ=255)
                               ttAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATa                                                                     >  1:2155258/1‑100 (MQ=255)
                                  aTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGa                                                                  >  1:1537559/1‑100 (MQ=255)
                                   tCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGa                                                                  <  1:2915473/99‑1 (MQ=255)
                                   tCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGAt                                                                 <  2:2260802/100‑1 (MQ=255)
                                   tCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGAt                                                                 <  1:964053/100‑1 (MQ=255)
                                    cgccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATg                                                                >  2:202098/1‑100 (MQ=255)
                                    cgccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATg                                                                >  2:736216/1‑100 (MQ=255)
                                    cgccgcATCCGCCAGTGGCGCAGTGCAGTTCCCGGATGCGACGCCTCACGCGCCTTATCCGGCCTACACCCGATCCACACCCCGCAGGCCTAATACGAt                                                                 >  1:3319248/1‑99 (MQ=18)
                                           tCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgc                                                         >  2:2947179/1‑100 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                       >  1:1093563/1‑100 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                       <  1:1211448/100‑1 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                       >  1:1370910/1‑100 (MQ=255)
                                              gCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatc                                                      <  2:871646/100‑1 (MQ=255)
                                               ccAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcg                                                     <  2:3224345/100‑1 (MQ=255)
                                                   tGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcgcatc                                                 <  2:2085510/100‑1 (MQ=255)
                                                    ggCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCa                                                <  2:216975/100‑1 (MQ=255)
                                                    ggCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCa                                                >  2:1678736/1‑100 (MQ=255)
                                                      cgcgGTGCAATTGCCGGATGCGACGCTTGATGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAgg                                              <  2:1568847/100‑1 (MQ=255)
                                                         ggTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCAt                                           >  2:1507594/1‑100 (MQ=255)
                                                          gTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCAGCTACAAACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCAtt                                          <  1:1243122/100‑1 (MQ=255)
                                                            gCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtgt                                        <  2:2728383/100‑1 (MQ=255)
                                                              aaTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGc                                      >  2:2896039/1‑100 (MQ=255)
                                                              aaTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGc                                      <  1:1450067/100‑1 (MQ=255)
                                                               aTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCt                                     >  2:1391873/1‑100 (MQ=255)
                                                                 tGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                   <  1:3141374/100‑1 (MQ=255)
                                                                 tGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                   <  2:2184626/100‑1 (MQ=255)
                                                                 ggccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                   >  1:3205496‑M2/35‑100 (MQ=255)
                                                                  gccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                  >  1:2743246‑M2/34‑100 (MQ=255)
                                                                  GCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                  <  1:3709212‑M1/100‑1 (MQ=255)
                                                                   ccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                 >  1:2611343‑M2/33‑100 (MQ=255)
                                                                   ccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACACCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                 >  1:720591‑M2/33‑100 (MQ=255)
                                                                   CCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                 >  2:629530‑M1/1‑100 (MQ=255)
                                                                     GGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAcc                               <  1:354061‑M1/100‑1 (MQ=255)
                                                                     GGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAc                                >  1:1829235‑M1/1‑99 (MQ=255)
                                                                      GATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccg                              >  1:3057204‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                            >  2:2478782‑M1/1‑100 (MQ=255)
                                                                         gCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgccg                           <  2:1310102/100‑1 (MQ=255)
                                                                         gCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgccg                           <  2:2616321/100‑1 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                          >  2:2600603/1‑100 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                          <  2:3078533/100‑1 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                          >  2:2682098/1‑100 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                          >  2:1907803/1‑100 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                          >  1:3654066/1‑100 (MQ=255)
                                                                               cTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCg                     <  2:3655690/100‑1 (MQ=255)
                                                                                ttGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCgg                    <  1:2408890/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                   <  2:2219807/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                   <  1:3628151/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                   <  2:1757637/100‑1 (MQ=255)
                                                                                   aCGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCAt                 >  2:3506896/1‑100 (MQ=255)
                                                                                    cgcgCCTTATCCGGCCTACCCCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATa                <  1:3084693/100‑1 (MQ=255)
                                                                                      cgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAcc              <  1:3455950/100‑1 (MQ=255)
                                                                                           tATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTa         >  2:2327053/1‑100 (MQ=255)
                                                                                            atccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTaa        >  2:540428‑M2/8‑100 (MQ=255)
                                                                                              ccggcCTGCACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg      >  2:1959216‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg      >  1:239675‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg      <  1:1789123‑M2/95‑1 (MQ=255)
                                                                                               cggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc     <  1:2330183‑M2/96‑1 (MQ=255)
                                                                                                ggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCa    <  2:1071675‑M2/97‑1 (MQ=255)
                                                                                                 gcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAg   >  2:3152307‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAg   <  2:2983320‑M2/98‑1 (MQ=255)
                                                                                                  cCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGt  >  2:3204032‑M2/2‑100 (MQ=255)
                                                                                                  cCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGt  <  1:95076‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
ACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGT  >  NC_000913/3217368‑3217565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.